RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 BTBD11A6QL63 1104 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 ASAP2O43150 1006 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 RAPGEF3O95398 923 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 SHBGP04278 402 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 MMEP08473 750 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 DNM2P50570 870 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 PMS1P54277 932 aaKnown RBP14.55□□□□□ -0.08
IFT88-202ENST00000351808 MRPS35P82673 323 aaKnown RBP14.55□□□□□ -0.08
IFT88-202ENST00000351808 TMEM154Q6P9G4 183 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 LMNTD2Q8IXW0 634 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 NEUROG2Q9H2A3 272 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 GOPCQ9HD26 462 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 PNMA2Q9UL42 364 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 MYH7BA7E2Y1 1941 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 FAM205CA6NFA0 338 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 CHN1P15882 459 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 RFC5P40937 340 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 ATP11AP98196 1134 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 SLC39A6Q13433 755 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 SEPT2Q15019 361 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 CCDC38Q502W7 563 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 ISCUQ9H1K1 167 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 ARHGAP20Q9P2F6 1191 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 NKX1-2Q9UD57 310 aaPredicted RBP14.55□□□□□ -0.08
IFT88-202ENST00000351808 TRIM33Q9UPN9 1127 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 USP31Q70CQ4 1352 aa14.55□□□□□ -0.08
IFT88-202ENST00000351808 TSPOAP1O95153 1857 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 PDS5AQ29RF7 1337 aaKnown RBP14.54□□□□□ -0.08
IFT88-202ENST00000351808 SRGNP10124 158 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 ABCD1P33897 745 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 KIF11P52732 1056 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 LACTBP83111 547 aaPredicted RBP14.54□□□□□ -0.08
IFT88-202ENST00000351808 CACNA2D4Q7Z3S7 1137 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 RIC3Q7Z5B4 369 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 SYCP3Q8IZU3 236 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 INCENPQ9NQS7 918 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 FBXO3Q9UK99 471 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 AKR1B10O60218 316 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 FMNL1O95466 1100 aaPredicted RBP14.54□□□□□ -0.08
IFT88-202ENST00000351808 VIMP08670 466 aaKnown RBP14.54□□□□□ -0.08
IFT88-202ENST00000351808 IFIT1P09914 478 aaKnown RBP14.54□□□□□ -0.08
IFT88-202ENST00000351808 EIF4A3P38919 411 aaKnown RBP14.54□□□□□ -0.08
IFT88-202ENST00000351808 GNAQP50148 359 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 LONP2Q86WA8 852 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 C2CD5Q86YS7 1000 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 SLC17A8Q8NDX2 589 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 LPIN2Q92539 896 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 EXOC1Q9NV70 894 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 DNAAF2Q9NVR5 837 aaKnown RBP14.54□□□□□ -0.08
IFT88-202ENST00000351808 DLGAP2Q9P1A6 1054 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 LRRC42Q9Y546 428 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 CD2APQ9Y5K6 639 aa14.54□□□□□ -0.08
IFT88-202ENST00000351808 SART1O43290 800 aaKnown RBP14.53□□□□□ -0.08
IFT88-202ENST00000351808 HIP1RO75146 1068 aa14.53□□□□□ -0.08
IFT88-202ENST00000351808 MYL1P05976 194 aa14.53□□□□□ -0.08
IFT88-202ENST00000351808 SP100P23497 879 aaPredicted RBP14.53□□□□□ -0.08
IFT88-202ENST00000351808 MAGEA1P43355 309 aa14.53□□□□□ -0.08
IFT88-202ENST00000351808 HLFQ16534 295 aa14.53□□□□□ -0.08
IFT88-202ENST00000351808 FAM163AQ96GL9 167 aaPredicted RBP14.53□□□□□ -0.08
IFT88-202ENST00000351808 MTRQ99707 1265 aa14.53□□□□□ -0.08
IFT88-202ENST00000351808 SELENOSQ9BQE4 189 aa14.53□□□□□ -0.08
IFT88-202ENST00000351808 MOV10L1Q9BXT6 1211 aaKnown RBP14.53□□□□□ -0.08
IFT88-202ENST00000351808 FOXP1Q9H334 677 aaPredicted RBP14.53□□□□□ -0.08
IFT88-202ENST00000351808 MMADHCQ9H3L0 296 aaPredicted RBP14.53□□□□□ -0.08
IFT88-202ENST00000351808 OCEL1Q9H607 264 aa14.53□□□□□ -0.08
IFT88-202ENST00000351808 CNOT10Q9H9A5 744 aaKnown RBP14.53□□□□□ -0.08
IFT88-202ENST00000351808 PACSIN2Q9UNF0 486 aaPredicted RBP14.53□□□□□ -0.08
IFT88-202ENST00000351808 PTPRUQ92729 1446 aa14.53□□□□□ -0.08
IFT88-202ENST00000351808 GOLGA6L10A0A0M3HER8 536 aa14.53□□□□□ -0.08
IFT88-202ENST00000351808 FTCDO95954 541 aa14.53□□□□□ -0.08
IFT88-202ENST00000351808 FKBP4Q02790 459 aaKnown RBP eCLIP14.53□□□□□ -0.08
IFT88-202ENST00000351808 RASSF7Q02833 373 aa14.53□□□□□ -0.08
IFT88-202ENST00000351808 LBRQ14739 615 aaKnown RBP14.53□□□□□ -0.08
IFT88-202ENST00000351808 ZNF658Q5TYW1 1059 aaPredicted RBP14.53□□□□□ -0.08
IFT88-202ENST00000351808 RNF14Q9UBS8 474 aa14.53□□□□□ -0.08
IFT88-202ENST00000351808 MLH3Q9UHC1 1453 aa14.53□□□□□ -0.08
IFT88-202ENST00000351808 NEURL1BA8MQ27 555 aa14.52□□□□□ -0.08
IFT88-202ENST00000351808 ZC3H6P61129 1189 aaKnown RBP14.52□□□□□ -0.08
IFT88-202ENST00000351808 GCKRQ14397 625 aa14.52□□□□□ -0.08
IFT88-202ENST00000351808 TMC4Q7Z404 712 aa14.52□□□□□ -0.08
IFT88-202ENST00000351808 CMTR1Q8N1G2 835 aaKnown RBP14.52□□□□□ -0.08
IFT88-202ENST00000351808 CENPTQ96BT3 561 aa14.52□□□□□ -0.08
IFT88-202ENST00000351808 BICD1Q96G01 975 aa14.52□□□□□ -0.08
IFT88-202ENST00000351808 MAGEC2Q9UBF1 373 aaPredicted RBP14.52□□□□□ -0.08
IFT88-202ENST00000351808 TMEM131LA2VDJ0 1609 aa14.52□□□□□ -0.08
IFT88-202ENST00000351808 AKAP12Q02952 1782 aa14.52□□□□□ -0.08
IFT88-202ENST00000351808 NWD2Q9ULI1 1742 aa14.52□□□□□ -0.08
IFT88-202ENST00000351808 B4E1Z4 1266 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 CYP27B1O15528 508 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 DDX58O95786 925 aaKnown RBP14.52□□□□□ -0.09
IFT88-202ENST00000351808 FBXO31Q5XUX0 539 aaPredicted RBP14.52□□□□□ -0.09
IFT88-202ENST00000351808 CCDC155Q8N6L0 562 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 PHC3Q8NDX5 983 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 MAIP1Q8WWC4 291 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 NOX5Q96PH1 765 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 TUBGCP2Q9BSJ2 902 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 STK36Q9NRP7 1315 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 TRIM75PA6NK02 468 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 EEF1GP26641 437 aaKnown RBP14.52□□□□□ -0.09
IFT88-202ENST00000351808 COPS2P61201 443 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms