RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 SLC12A6Q9UHW9 1150 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 NFU1Q9UMS0 254 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 FAM205CA6NFA0 338 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 B4DLN1 442 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 PRPF3O43395 683 aaKnown RBP16.5■□□□□ 0.23
TRAF3-202ENST00000351691 HEXIM1O94992 359 aaKnown RBP16.5■□□□□ 0.23
TRAF3-202ENST00000351691 MOCS3O95396 460 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 GLI1P08151 1106 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 FAM153BP0C7A2 387 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 CALM1P0DP23 149 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 CALM2P0DP24 149 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 CALM3P0DP25 149 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 MATR3P43243 847 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRAF3-202ENST00000351691 SCTRP47872 440 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 ICA1Q05084 483 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 TBC1D8BQ0IIM8 1120 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 SLMAPQ14BN4 828 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 FAM153CQ494X1 144 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 TTI2Q6NXR4 508 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 RSRC1Q96IZ7 334 aaKnown RBP16.5■□□□□ 0.23
TRAF3-202ENST00000351691 FAM153AQ9UHL3 310 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 DLEC1Q9Y238 1755 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 COL5A3P25940 1745 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-202ENST00000351691 FGRP09769 529 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 LONP1P36776 959 aaKnown RBP16.49■□□□□ 0.23
TRAF3-202ENST00000351691 PPP1R2P41236 205 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 PTGDRQ13258 359 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 EARS2Q5JPH6 523 aaKnown RBP16.49■□□□□ 0.23
TRAF3-202ENST00000351691 FAM182BQ5T319 152 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 AGBL2Q5U5Z8 902 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 ARL6IP4Q66PJ3 421 aaKnown RBP16.49■□□□□ 0.23
TRAF3-202ENST00000351691 CACNA2D3Q8IZS8 1091 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 MIGA1Q8NAN2 632 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 SHISA4Q96DD7 197 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 SEC16BQ96JE7 1060 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 TRIM47Q96LD4 638 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 HINFPQ9BQA5 517 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 TLR10Q9BXR5 811 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 MLXIPQ9HAP2 919 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 EPB41L5Q9HCM4 733 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 HAUS2Q9NVX0 235 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 BSDC1Q9NW68 430 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-202ENST00000351691 MYH14Q7Z406 1995 aaKnown RBP16.49■□□□□ 0.23
TRAF3-202ENST00000351691 ATP2B2Q01814 1243 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 PKN1Q16512 942 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 RUFY4Q6ZNE9 571 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 RIOK1Q9BRS2 568 aaKnown RBP16.49■□□□□ 0.23
TRAF3-202ENST00000351691 EP400Q96L91 3159 aa16.49■□□□□ 0.23
TRAF3-202ENST00000351691 MYH10P35580 1976 aa16.48■□□□□ 0.23
TRAF3-202ENST00000351691 TRIM49BA6NDI0 452 aa16.48■□□□□ 0.23
TRAF3-202ENST00000351691 PES1O00541 588 aaKnown RBP16.48■□□□□ 0.23
TRAF3-202ENST00000351691 RHOBTB3O94955 611 aa16.48■□□□□ 0.23
TRAF3-202ENST00000351691 MYBP10242 640 aa16.48■□□□□ 0.23
TRAF3-202ENST00000351691 RIPK1Q13546 671 aa16.48■□□□□ 0.23
TRAF3-202ENST00000351691 ZNF174Q15697 407 aa16.48■□□□□ 0.23
TRAF3-202ENST00000351691 CAVIN4Q5BKX8 364 aa16.48■□□□□ 0.23
TRAF3-202ENST00000351691 GIMAP8Q8ND71 665 aaPredicted RBP16.48■□□□□ 0.23
TRAF3-202ENST00000351691 CCHCR1Q8TD31 782 aa16.48■□□□□ 0.23
TRAF3-202ENST00000351691 SMCR8Q8TEV9 937 aaPredicted RBP16.48■□□□□ 0.23
TRAF3-202ENST00000351691 ZKSCAN3Q9BRR0 538 aa16.48■□□□□ 0.23
TRAF3-202ENST00000351691 PLAAQ9Y263 795 aa16.48■□□□□ 0.23
TRAF3-202ENST00000351691 DUOX1Q9NRD9 1551 aa16.48■□□□□ 0.23
TRAF3-202ENST00000351691 TNKSO95271 1327 aa16.48■□□□□ 0.23
TRAF3-202ENST00000351691 CACNA1SQ13698 1873 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 BICDL2A1A5D9 508 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 GCOM1H8Y6P7 765 aaPredicted RBP16.47■□□□□ 0.23
TRAF3-202ENST00000351691 KCNQ2O43526 872 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 GSTA1P08263 222 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 MYZAPP0CAP1 466 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 KIF11P52732 1056 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 GUCY2DQ02846 1103 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 SLC10A5Q5PT55 438 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 RASSF8Q8NHQ8 419 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 NUP133Q8WUM0 1156 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 CASKIN2Q8WXE0 1202 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 ZSCAN10Q96SZ4 725 aaPredicted RBP16.47■□□□□ 0.23
TRAF3-202ENST00000351691 EBF2Q9HAK2 575 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.47■□□□□ 0.23
TRAF3-202ENST00000351691 LEMD3Q9Y2U8 911 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 BTAF1O14981 1849 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 SBF2Q86WG5 1849 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 MINDY4BA8MYZ0 360 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 GBP2P32456 591 aaPredicted RBP16.47■□□□□ 0.23
TRAF3-202ENST00000351691 PMS1P54277 932 aaKnown RBP16.47■□□□□ 0.23
TRAF3-202ENST00000351691 KLHDC7AQ5VTJ3 777 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 CATIPQ7Z7H3 387 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 CCT6BQ92526 530 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 TATDN2Q93075 761 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 SCLT1Q96NL6 688 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 NOX5Q96PH1 765 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 DUSP9Q99956 384 aaKnown RBP16.47■□□□□ 0.23
TRAF3-202ENST00000351691 PPANQ9NQ55 473 aaKnown RBP16.47■□□□□ 0.23
TRAF3-202ENST00000351691 SCN7AQ01118 1682 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 BRWD3Q6RI45 1802 aa16.47■□□□□ 0.23
TRAF3-202ENST00000351691 KLRC4O43908 158 aa16.46■□□□□ 0.23
TRAF3-202ENST00000351691 DDAH1O94760 285 aa16.46■□□□□ 0.23
TRAF3-202ENST00000351691 NT5C2P49902 561 aa16.46■□□□□ 0.23
TRAF3-202ENST00000351691 FUT2Q10981 343 aa16.46■□□□□ 0.23
TRAF3-202ENST00000351691 BYSLQ13895 437 aaKnown RBP16.46■□□□□ 0.23
TRAF3-202ENST00000351691 FKBP15Q5T1M5 1219 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms