RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 NPLOC4Q8TAT6 608 aa21.6■■□□□ 1.05
CHMP4A-201ENST00000347519 LENG9Q96B70 501 aa21.6■■□□□ 1.05
CHMP4A-201ENST00000347519 TRIM47Q96LD4 638 aa21.6■■□□□ 1.05
CHMP4A-201ENST00000347519 UIMC1Q96RL1 719 aa21.6■■□□□ 1.05
CHMP4A-201ENST00000347519 TSKSQ9UJT2 592 aa21.6■■□□□ 1.05
CHMP4A-201ENST00000347519 GJD2Q9UKL4 321 aa21.6■■□□□ 1.05
CHMP4A-201ENST00000347519 IGLV3-22A0A075B6J6 115 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 GPR25O00155 361 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 YEATS4O95619 227 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 PSMC4P43686 418 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 SP3Q02447 781 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 PTGDRQ13258 359 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 SLC39A14Q15043 492 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 STK38Q15208 465 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 VSIG10LQ86VR7 867 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 USP6NLQ92738 828 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 SPATA32Q96LK8 384 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 GBP4Q96PP9 640 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 PRDM10Q9NQV6 1147 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 SAGE1Q9NXZ1 904 aa21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 DDX25Q9UHL0 483 aaKnown RBP21.59■■□□□ 1.05
CHMP4A-201ENST00000347519 KIAA1217Q5T5P2 1943 aa21.58■■□□□ 1.05
CHMP4A-201ENST00000347519 TNPO2O14787 897 aaKnown RBP21.58■■□□□ 1.04
CHMP4A-201ENST00000347519 ITGB5P18084 799 aa21.58■■□□□ 1.04
CHMP4A-201ENST00000347519 EDNRBP24530 442 aa21.58■■□□□ 1.04
CHMP4A-201ENST00000347519 MARCKSP29966 332 aaPredicted RBP21.58■■□□□ 1.04
CHMP4A-201ENST00000347519 ZNF76P36508 570 aa21.58■■□□□ 1.04
CHMP4A-201ENST00000347519 MOXD1Q6UVY6 613 aa21.58■■□□□ 1.04
CHMP4A-201ENST00000347519 GJA10Q969M2 543 aa21.58■■□□□ 1.04
CHMP4A-201ENST00000347519 UBIAD1Q9Y5Z9 338 aa21.58■■□□□ 1.04
CHMP4A-201ENST00000347519 NEMFO60524 1076 aa21.57■■□□□ 1.04
CHMP4A-201ENST00000347519 CCND2P30279 289 aa21.57■■□□□ 1.04
CHMP4A-201ENST00000347519 ATP2C1P98194 919 aaPredicted RBP21.57■■□□□ 1.04
CHMP4A-201ENST00000347519 GRIN1Q05586 938 aa21.57■■□□□ 1.04
CHMP4A-201ENST00000347519 MAP2K5Q13163 448 aa21.57■■□□□ 1.04
CHMP4A-201ENST00000347519 IL17AQ16552 155 aa21.57■■□□□ 1.04
CHMP4A-201ENST00000347519 PRR16Q569H4 304 aa21.57■■□□□ 1.04
CHMP4A-201ENST00000347519 CD99L2Q8TCZ2 262 aa21.57■■□□□ 1.04
CHMP4A-201ENST00000347519 MXRA8Q9BRK3 442 aa21.57■■□□□ 1.04
CHMP4A-201ENST00000347519 ADD3Q9UEY8 706 aaKnown RBP21.57■■□□□ 1.04
CHMP4A-201ENST00000347519 MEIS1O00470 390 aa21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 SPTLC2O15270 562 aa21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 RGS20O76081 388 aa21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 ARP10275 920 aa21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 GCFC2P16383 781 aaKnown RBP21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 FCGRTP55899 365 aa21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 Q4G0T1 1027 aa21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 CEP55Q53EZ4 464 aa21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 DPP9Q86TI2 863 aa21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 MTMR9Q96QG7 549 aa21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 IWS1Q96ST2 819 aa21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 WDR11Q9BZH6 1224 aa21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 SCAND2PQ9GZW5 306 aaPredicted RBP21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 GABRQQ9UN88 632 aa21.56■■□□□ 1.04
CHMP4A-201ENST00000347519 GADD45BO75293 160 aaPredicted RBP21.55■■□□□ 1.04
CHMP4A-201ENST00000347519 MCM4P33991 863 aa21.55■■□□□ 1.04
CHMP4A-201ENST00000347519 ORC2Q13416 577 aaPredicted RBP21.55■■□□□ 1.04
CHMP4A-201ENST00000347519 PLA2G4DQ86XP0 818 aa21.55■■□□□ 1.04
CHMP4A-201ENST00000347519 TMEM87AQ8NBN3 555 aa21.55■■□□□ 1.04
CHMP4A-201ENST00000347519 MORC4Q8TE76 937 aa21.55■■□□□ 1.04
CHMP4A-201ENST00000347519 HAS1Q92839 578 aa21.55■■□□□ 1.04
CHMP4A-201ENST00000347519 MAML3Q96JK9 1138 aa21.55■■□□□ 1.04
CHMP4A-201ENST00000347519 NAP1L4Q99733 375 aaKnown RBP21.55■■□□□ 1.04
CHMP4A-201ENST00000347519 BEGAINQ9BUH8 593 aa21.55■■□□□ 1.04
CHMP4A-201ENST00000347519 JADE2Q9NQC1 790 aa21.55■■□□□ 1.04
CHMP4A-201ENST00000347519 FBXO2Q9UK22 296 aaPredicted RBP21.55■■□□□ 1.04
CHMP4A-201ENST00000347519 PRPF40AO75400 957 aaKnown RBP21.54■■□□□ 1.04
CHMP4A-201ENST00000347519 CYP2B6P20813 491 aa21.54■■□□□ 1.04
CHMP4A-201ENST00000347519 SEMA3FQ13275 785 aa21.54■■□□□ 1.04
CHMP4A-201ENST00000347519 XRRA1Q6P2D8 792 aa21.54■■□□□ 1.04
CHMP4A-201ENST00000347519 ETNPPLQ8TBG4 499 aa21.54■■□□□ 1.04
CHMP4A-201ENST00000347519 CLIC6Q96NY7 704 aa21.54■■□□□ 1.04
CHMP4A-201ENST00000347519 NUDT12Q9BQG2 462 aa21.54■■□□□ 1.04
CHMP4A-201ENST00000347519 KCNMB3Q9NPA1 279 aa21.54■■□□□ 1.04
CHMP4A-201ENST00000347519 FLRT1Q9NZU1 646 aa21.54■■□□□ 1.04
CHMP4A-201ENST00000347519 PCDHA7Q9UN72 937 aa21.54■■□□□ 1.04
CHMP4A-201ENST00000347519 CEP131Q9UPN4 1083 aa21.54■■□□□ 1.04
CHMP4A-201ENST00000347519 DOCK5Q9H7D0 1870 aa21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 MSH4O15457 936 aa21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 HOXC6P09630 235 aa21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 OR52Z1P0C646 297 aa21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 PDE4DQ08499 809 aa21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 STXBP2Q15833 593 aa21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 CALCRLQ16602 461 aa21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 CCL14Q16627 93 aa21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 TPRNQ4KMQ1 711 aa21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 ZNF467Q7Z7K2 595 aaPredicted RBP21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 ZNF296Q8WUU4 475 aaPredicted RBP21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 LMBRD1Q9NUN5 540 aa21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 DIS3Q9Y2L1 958 aaKnown RBP21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 MORC2Q9Y6X9 1032 aaPredicted RBP21.53■■□□□ 1.04
CHMP4A-201ENST00000347519 PPP6R2O75170 966 aa21.52■■□□□ 1.04
CHMP4A-201ENST00000347519 BMP15O95972 392 aa21.52■■□□□ 1.04
CHMP4A-201ENST00000347519 AXDND1Q5T1B0 1012 aaPredicted RBP21.52■■□□□ 1.04
CHMP4A-201ENST00000347519 ARMCX2Q7L311 632 aa21.52■■□□□ 1.04
CHMP4A-201ENST00000347519 EEPD1Q7L9B9 569 aa21.52■■□□□ 1.04
CHMP4A-201ENST00000347519 NIPA1Q7RTP0 329 aa21.52■■□□□ 1.04
CHMP4A-201ENST00000347519 KCNG4Q8TDN1 519 aa21.52■■□□□ 1.04
CHMP4A-201ENST00000347519 INPP4AQ96PE3 977 aaPredicted RBP21.52■■□□□ 1.04
CHMP4A-201ENST00000347519 ELP1O95163 1332 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms