RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 DHX40Q8IX18 779 aaKnown RBP24.16■■□□□ 1.46
TSPAN3-202ENST00000346495 SNX29Q8TEQ0 813 aa24.16■■□□□ 1.46
TSPAN3-202ENST00000346495 CDK5RAP3Q96JB5 506 aa24.16■■□□□ 1.46
TSPAN3-202ENST00000346495 RNF146Q9NTX7 359 aa24.16■■□□□ 1.46
TSPAN3-202ENST00000346495 DACH1Q9UI36 760 aa24.16■■□□□ 1.46
TSPAN3-202ENST00000346495 ZNF214Q9UL59 606 aaPredicted RBP24.16■■□□□ 1.46
TSPAN3-202ENST00000346495 RPTORQ8N122 1335 aa24.15■■□□□ 1.46
TSPAN3-202ENST00000346495 SPDYE16A6NNV3 312 aaPredicted RBP24.15■■□□□ 1.46
TSPAN3-202ENST00000346495 SNRNP48Q6IEG0 339 aaKnown RBP24.15■■□□□ 1.46
TSPAN3-202ENST00000346495 GADL1Q6ZQY3 521 aa24.15■■□□□ 1.46
TSPAN3-202ENST00000346495 MLKLQ8NB16 471 aa24.15■■□□□ 1.46
TSPAN3-202ENST00000346495 STAMQ92783 540 aa24.15■■□□□ 1.46
TSPAN3-202ENST00000346495 PLIN2Q99541 437 aa24.15■■□□□ 1.46
TSPAN3-202ENST00000346495 MTRQ99707 1265 aa24.15■■□□□ 1.46
TSPAN3-202ENST00000346495 KBTBD4Q9NVX7 518 aa24.15■■□□□ 1.46
TSPAN3-202ENST00000346495 STK17AQ9UEE5 414 aa24.15■■□□□ 1.46
TSPAN3-202ENST00000346495 KCNH4Q9UQ05 1017 aa24.15■■□□□ 1.46
TSPAN3-202ENST00000346495 IGLV3-22A0A075B6J6 115 aa24.14■■□□□ 1.46
TSPAN3-202ENST00000346495 UNCXA6NJT0 531 aa24.14■■□□□ 1.46
TSPAN3-202ENST00000346495 HOXA7P31268 230 aaPredicted RBP24.14■■□□□ 1.46
TSPAN3-202ENST00000346495 GRB10Q13322 594 aa24.14■■□□□ 1.46
TSPAN3-202ENST00000346495 TMEM132BQ14DG7 1078 aa24.14■■□□□ 1.46
TSPAN3-202ENST00000346495 TREML2Q5T2D2 321 aa24.14■■□□□ 1.46
TSPAN3-202ENST00000346495 LDLRAD1Q5T700 205 aa24.14■■□□□ 1.46
TSPAN3-202ENST00000346495 AOPEPQ8N6M6 819 aa24.14■■□□□ 1.46
TSPAN3-202ENST00000346495 SYTL5Q8TDW5 730 aaPredicted RBP24.14■■□□□ 1.46
TSPAN3-202ENST00000346495 TEX13BQ9BXU2 312 aa24.14■■□□□ 1.46
TSPAN3-202ENST00000346495 MAF1Q9H063 256 aa24.14■■□□□ 1.46
TSPAN3-202ENST00000346495 STK24Q9Y6E0 443 aa24.14■■□□□ 1.46
TSPAN3-202ENST00000346495 KDM3AQ9Y4C1 1321 aa24.14■■□□□ 1.45
TSPAN3-202ENST00000346495 SMTNL1A8MU46 457 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 MSH4O15457 936 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 POTEIP0CG38 1075 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 POTEJP0CG39 1038 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 MAP1SQ66K74 1059 aaPredicted RBP24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 RNF207Q6ZRF8 634 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 GJA10Q969M2 543 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 COL20A1Q9P218 1284 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 BMP6P22004 513 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 CASP1P29466 404 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 RPS6P62753 249 aaKnown RBP24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 UBXN2AP68543 259 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 PLCB2Q00722 1185 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 SETQ01105 290 aaPredicted RBP24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 CUL4BQ13620 913 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 CEP55Q53EZ4 464 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 PLA2G4DQ86XP0 818 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 OPTNQ96CV9 577 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 PNMA5Q96PV4 448 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 BLZF1Q9H2G9 400 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 RMND1Q9NWS8 449 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 RIPK3Q9Y572 518 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 A0A0G2JMZ2 1700 aa24.13■■□□□ 1.45
TSPAN3-202ENST00000346495 FRMPD4Q14CM0 1322 aa24.12■■□□□ 1.45
TSPAN3-202ENST00000346495 IKBKBO14920 756 aa24.12■■□□□ 1.45
TSPAN3-202ENST00000346495 ADCY5O95622 1261 aa24.12■■□□□ 1.45
TSPAN3-202ENST00000346495 AMPD3Q01432 767 aa24.12■■□□□ 1.45
TSPAN3-202ENST00000346495 TMEM119Q4V9L6 283 aa24.12■■□□□ 1.45
TSPAN3-202ENST00000346495 CYP2W1Q8TAV3 490 aa24.12■■□□□ 1.45
TSPAN3-202ENST00000346495 RRAGCQ9HB90 399 aa24.12■■□□□ 1.45
TSPAN3-202ENST00000346495 TPM4P67936 248 aa24.11■■□□□ 1.45
TSPAN3-202ENST00000346495 SEMA3FQ13275 785 aa24.11■■□□□ 1.45
TSPAN3-202ENST00000346495 CT47A1Q5JQC4 288 aaPredicted RBP24.11■■□□□ 1.45
TSPAN3-202ENST00000346495 HYIQ5T013 277 aa24.11■■□□□ 1.45
TSPAN3-202ENST00000346495 NSMFQ6X4W1 530 aa24.11■■□□□ 1.45
TSPAN3-202ENST00000346495 SLC30A10Q6XR72 485 aa24.11■■□□□ 1.45
TSPAN3-202ENST00000346495 MB21D1Q8N884 522 aa24.11■■□□□ 1.45
TSPAN3-202ENST00000346495 LRRC15Q8TF66 581 aa24.11■■□□□ 1.45
TSPAN3-202ENST00000346495 NT5C3AQ9H0P0 336 aa24.11■■□□□ 1.45
TSPAN3-202ENST00000346495 TRAF5O00463 557 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 MEIS1O00470 390 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 RPN1P04843 607 aaKnown RBP24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 CCT6AP40227 531 aaKnown RBP24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 STAT3P40763 770 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 SPIRE1Q08AE8 756 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 PCNX4Q63HM2 1172 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 HAUS3Q68CZ6 603 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 FASTKD5Q7L8L6 764 aaKnown RBP24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 NIPA1Q7RTP0 329 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 ERMNQ8TAM6 284 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 NUDT12Q9BQG2 462 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 MXRA8Q9BRK3 442 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 AP5Z1O43299 807 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 LBX2Q6XYB7 198 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 UIMC1Q96RL1 719 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 ACAD9Q9H845 621 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 ZNF408Q9H9D4 720 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 AGTPBP1Q9UPW5 1226 aa24.1■■□□□ 1.45
TSPAN3-202ENST00000346495 IRX3P78415 501 aaPredicted RBP24.09■■□□□ 1.45
TSPAN3-202ENST00000346495 BAATQ14032 418 aaPredicted RBP24.09■■□□□ 1.45
TSPAN3-202ENST00000346495 PLS1Q14651 629 aa24.09■■□□□ 1.45
TSPAN3-202ENST00000346495 SV2BQ7L1I2 683 aa24.09■■□□□ 1.45
TSPAN3-202ENST00000346495 LARP4BQ92615 738 aaKnown RBP24.09■■□□□ 1.45
TSPAN3-202ENST00000346495 SLC5A5Q92911 643 aa24.09■■□□□ 1.45
TSPAN3-202ENST00000346495 SLC10A4Q96EP9 437 aa24.09■■□□□ 1.45
TSPAN3-202ENST00000346495 TAAR1Q96RJ0 339 aa24.09■■□□□ 1.45
TSPAN3-202ENST00000346495 C7orf25Q9BPX7 421 aa24.09■■□□□ 1.45
TSPAN3-202ENST00000346495 BLOC1S4Q9NUP1 217 aa24.09■■□□□ 1.45
TSPAN3-202ENST00000346495 VAV3Q9UKW4 847 aa24.09■■□□□ 1.45
TSPAN3-202ENST00000346495 BCRP11274 1271 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms