RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 hCG_1984214I3L0E3 225 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 PLEKHA8P1O95397 391 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 CTDNEP1O95476 244 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 RPN1P04843 607 aaKnown RBP11.93□□□□□ -0.5
CLCN6-202ENST00000346436 SCG2P13521 617 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 SNAPC2Q13487 334 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 HERC4Q5GLZ8 1057 aaPredicted RBP11.93□□□□□ -0.5
CLCN6-202ENST00000346436 DCUN1D2Q6PH85 259 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 RSRC2Q7L4I2 434 aaKnown RBP11.93□□□□□ -0.5
CLCN6-202ENST00000346436 ZNF713Q8N859 430 aaPredicted RBP11.93□□□□□ -0.5
CLCN6-202ENST00000346436 BCRP11274 1271 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 RRAGAQ7L523 313 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 C7orf31Q8N865 590 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 NLRP7Q8WX94 980 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 MRPL44Q9H9J2 332 aaKnown RBP11.92□□□□□ -0.5
CLCN6-202ENST00000346436 COL15A1P39059 1388 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 CRCPO75575 148 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 LMNB1P20700 586 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 HPDP32754 393 aaPredicted RBP11.92□□□□□ -0.5
CLCN6-202ENST00000346436 PNMA1Q8ND90 353 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 STRBPQ96SI9 672 aaKnown RBP11.92□□□□□ -0.5
CLCN6-202ENST00000346436 APOL6Q9BWW8 343 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 FOXP1Q9H334 677 aaPredicted RBP11.92□□□□□ -0.5
CLCN6-202ENST00000346436 FRMPD2Q68DX3 1309 aaPredicted RBP11.92□□□□□ -0.5
CLCN6-202ENST00000346436 ESYT2A0FGR8 921 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 ALDH1A1P00352 501 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 MNAT1P51948 309 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 EXOSC10Q01780 885 aaKnown RBP11.92□□□□□ -0.5
CLCN6-202ENST00000346436 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 FAM167AQ96KS9 214 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 SLC39A2Q9NP94 309 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 NR2E3Q9Y5X4 410 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 KIF20BQ96Q89 1820 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 GCNT3O95395 438 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 COPB1P53618 953 aaKnown RBP11.92□□□□□ -0.5
CLCN6-202ENST00000346436 PDIA6Q15084 440 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 ZSCAN26Q16670 478 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 WDR11Q9BZH6 1224 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 OPA1O60313 960 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 DDAH1O94760 285 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 GUCY1A2P33402 732 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 SHC4Q6S5L8 630 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 TMEM179Q6ZVK1 233 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 SRGAP1Q7Z6B7 1085 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 OR8K1Q8NGG5 319 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 PARD6BQ9BYG5 372 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 SENP2Q9HC62 589 aa11.92□□□□□ -0.5
CLCN6-202ENST00000346436 ASB14A6NK59 587 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 N4BP1O75113 896 aaKnown RBP11.91□□□□□ -0.5
CLCN6-202ENST00000346436 FCER1AP12319 257 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 ST3GAL1Q11201 340 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 SLC15A2Q16348 729 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 PRR16Q569H4 304 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 SEL1L2Q5TEA6 688 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 RESP18Q5W5W9 173 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 RIPOR2Q9Y4F9 1068 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 SAR1BQ9Y6B6 198 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 FRMPD1Q5SYB0 1578 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 BUB1O43683 1085 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 IFNAR1P17181 557 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 MAGEA1P43355 309 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 VAV2P52735 878 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 C8orf74Q6P047 294 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 KLHL7Q8IXQ5 586 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 RBM46Q8TBY0 533 aaKnown RBP11.91□□□□□ -0.5
CLCN6-202ENST00000346436 MROH1Q8NDA8 1641 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 DENND3A2RUS2 1198 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
CLCN6-202ENST00000346436 KLRF2D3W0D1 207 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 RPS12P25398 132 aaKnown RBP11.91□□□□□ -0.5
CLCN6-202ENST00000346436 TNNC1P63316 161 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 AOC3Q16853 763 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 TSGA10IPQ3SY00 556 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 SPDYE2Q495Y8 402 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 MIGA2Q7L4E1 593 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 SEPT9Q9UHD8 586 aaPredicted RBP11.91□□□□□ -0.5
CLCN6-202ENST00000346436 CSPG5O95196 566 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 CELF2O95319 508 aaKnown RBP11.91□□□□□ -0.5
CLCN6-202ENST00000346436 TFRCP02786 760 aaKnown RBP11.91□□□□□ -0.5
CLCN6-202ENST00000346436 SP8Q8IXZ3 490 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 TRIML1Q8N9V2 468 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 ATG3Q9NT62 314 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
CLCN6-202ENST00000346436 A0A1W2PRG0 241 aa11.9□□□□□ -0.5
CLCN6-202ENST00000346436 TLDC2A0PJX2 215 aa11.9□□□□□ -0.5
CLCN6-202ENST00000346436 GDF11O95390 407 aa11.9□□□□□ -0.5
CLCN6-202ENST00000346436 VEGFAP15692 232 aaPredicted RBP11.9□□□□□ -0.5
CLCN6-202ENST00000346436 FCGRTP55899 365 aa11.9□□□□□ -0.5
CLCN6-202ENST00000346436 TTC19Q6DKK2 380 aaPredicted RBP11.9□□□□□ -0.5
CLCN6-202ENST00000346436 IFIH1Q9BYX4 1025 aaKnown RBP11.9□□□□□ -0.5
CLCN6-202ENST00000346436 RASSF4Q9H2L5 321 aa11.9□□□□□ -0.5
CLCN6-202ENST00000346436 KIF9Q9HAQ2 790 aa11.9□□□□□ -0.5
CLCN6-202ENST00000346436 EBAG9O00559 213 aa11.9□□□□□ -0.5
CLCN6-202ENST00000346436 CETPP11597 493 aa11.9□□□□□ -0.5
CLCN6-202ENST00000346436 COL9A3Q14050 684 aaPredicted RBP11.9□□□□□ -0.5
CLCN6-202ENST00000346436 TTLL4Q14679 1199 aa11.9□□□□□ -0.5
CLCN6-202ENST00000346436 CCDC63Q8NA47 563 aa11.9□□□□□ -0.5
CLCN6-202ENST00000346436 DPF3Q92784 378 aa11.9□□□□□ -0.5
CLCN6-202ENST00000346436 TRIM31Q9BZY9 425 aa11.9□□□□□ -0.5
CLCN6-202ENST00000346436 ADAMTS13Q76LX8 1427 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms