RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 TTC36A6NLP5 189 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 MEFVO15553 781 aaPredicted RBP18.96■□□□□ 0.63
SPAST-202ENST00000345662 STMN1P16949 149 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 PTPREP23469 700 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 ANKRD20A4Q4UJ75 823 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 ANKRD20A8PQ5CZ79 823 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 ANKRD20A2Q5SQ80 823 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 ANKRD20A1Q5TYW2 823 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 TFCP2L1Q9NZI6 479 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 KDM6BO15054 1643 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 LGALS16A8MUM7 142 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 GAS7O60861 476 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 RNF8O76064 485 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 ESRRAP11474 423 aaPredicted RBP18.96■□□□□ 0.63
SPAST-202ENST00000345662 CAPRIN2Q6IMN6 1127 aaKnown RBP18.96■□□□□ 0.63
SPAST-202ENST00000345662 STK17AQ9UEE5 414 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 TTC37Q6PGP7 1564 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 NSFP46459 744 aaKnown RBP18.96■□□□□ 0.63
SPAST-202ENST00000345662 TMED1Q13445 227 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 LRRC41Q15345 812 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 ATP6V1G3Q96LB4 118 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 PITPNM3Q9BZ71 974 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 HOXA7P31268 230 aaPredicted RBP18.96■□□□□ 0.63
SPAST-202ENST00000345662 DRP2Q13474 957 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 PRR16Q569H4 304 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 KAZNQ674X7 775 aa18.96■□□□□ 0.63
SPAST-202ENST00000345662 RIMBP2O15034 1052 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 MAGOHP61326 146 aaKnown RBP18.95■□□□□ 0.62
SPAST-202ENST00000345662 MYL7Q01449 175 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 ARHGEF10LQ9HCE6 1279 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 CFAP73A6NFT4 308 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 RPS6KA2Q15349 733 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 OTUD6AQ7L8S5 288 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 STOML1Q9UBI4 398 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.95■□□□□ 0.62
SPAST-202ENST00000345662 CFBP00751 764 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 SNX1Q13596 522 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 ZC3H18Q86VM9 953 aaKnown RBP18.95■□□□□ 0.62
SPAST-202ENST00000345662 ZNF710Q8N1W2 664 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 CDC25AP30304 524 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 ADORA1P30542 326 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 LIFRP42702 1097 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 ZNF579Q8NAF0 562 aaKnown RBP18.95■□□□□ 0.62
SPAST-202ENST00000345662 OSBP2Q969R2 916 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 HAUS1Q96CS2 278 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 KIAA1024Q9UPX6 916 aa18.95■□□□□ 0.62
SPAST-202ENST00000345662 IFT122Q9HBG6 1241 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 ADAMTS1Q9UHI8 967 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 SUFUQ9UMX1 484 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 EXOC1LA0A1B0GW35 172 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 MSH2P43246 934 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 DYNC1I2Q13409 638 aaKnown RBP18.94■□□□□ 0.62
SPAST-202ENST00000345662 IQCB1Q15051 598 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 GOLGA8HP0CJ92 632 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 MX2P20592 715 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 YWHAEP62258 255 aaKnown RBP18.94■□□□□ 0.62
SPAST-202ENST00000345662 DDB1Q16531 1140 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 SH3GL3Q99963 347 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 YY1AP1Q9H869 796 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 KCNG1Q9UIX4 513 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 DISP1Q96F81 1524 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 K7ENM7 598 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 PALMO75781 387 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 UFL1O94874 794 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 TTLL12Q14166 644 aaPredicted RBP18.94■□□□□ 0.62
SPAST-202ENST00000345662 ZNF653Q96CK0 615 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
SPAST-202ENST00000345662 H0Y3Z8 333 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 STAM2O75886 525 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 ASPHQ12797 758 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 ALKBH5Q6P6C2 394 aaKnown RBP18.93■□□□□ 0.62
SPAST-202ENST00000345662 RASGRP4Q8TDF6 673 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 OSBPL9Q96SU4 736 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 CPSF1Q10570 1443 aaKnown RBP18.93■□□□□ 0.62
SPAST-202ENST00000345662 ARHGAP31Q2M1Z3 1444 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 DNAJC8O75937 253 aaPredicted RBP18.93■□□□□ 0.62
SPAST-202ENST00000345662 SASH1O94885 1247 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 FGGP02679 453 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 CA4P22748 312 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 LRRC63Q05C16 580 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 HDAC6Q9UBN7 1215 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 EIF4G3O43432 1585 aaKnown RBP18.93■□□□□ 0.62
SPAST-202ENST00000345662 PSMC2P35998 433 aaKnown RBP18.93■□□□□ 0.62
SPAST-202ENST00000345662 PROSER3Q2NL68 480 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 FBXW10Q5XX13 1052 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 ARL6IP4Q66PJ3 421 aaKnown RBP18.93■□□□□ 0.62
SPAST-202ENST00000345662 EPS15L1Q9UBC2 864 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 MGEA5O60502 916 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 KRT81Q14533 505 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 AOC3Q16853 763 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 CDAN1Q8IWY9 1227 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 TAB3Q8N5C8 712 aaPredicted RBP18.93■□□□□ 0.62
SPAST-202ENST00000345662 SAMD9Q5K651 1589 aa18.93■□□□□ 0.62
SPAST-202ENST00000345662 PODXLO00592 558 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 PRPF3O43395 683 aaKnown RBP18.92■□□□□ 0.62
SPAST-202ENST00000345662 MAPK4P31152 587 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 ADD2P35612 726 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 MFAP3P55082 362 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 PHEXP78562 749 aa18.92■□□□□ 0.62
SPAST-202ENST00000345662 PSMD2Q13200 908 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms