RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 SIK3Q9Y2K2 1263 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 SNED1Q8TER0 1413 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 TRAF5O00463 557 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 RNF40O75150 1001 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 SCNN1DP51172 638 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 CKAP4Q07065 602 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 TDRD12Q587J7 1177 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 FGFBP2Q9BYJ0 223 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 JMJD4Q9H9V9 463 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 DDX25Q9UHL0 483 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 PLAGL2Q9UPG8 496 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 A0A1B0GUL6 1792 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 PPP1R11O60927 126 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 TACC1O75410 805 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 ACTN2P35609 894 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 MAGEA1P43355 309 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 MAN2A1Q16706 1144 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 LEKR1Q6ZMV7 388 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 LRRC1Q9BTT6 524 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 POLD4Q9HCU8 107 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 LCMT1Q9UIC8 334 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 SALL4Q9UJQ4 1053 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 DAGLAQ9Y4D2 1042 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 SCN7AQ01118 1682 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 A0A1W2PQJ5 194 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 USP17L15C9J2P7 530 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 USP17L10C9JJH3 530 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 USP17L13C9JLJ4 530 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 USP17L11C9JVI0 530 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 USP17L18D6R9N7 530 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 USP17L22D6RA61 530 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 USP17L17D6RBQ6 530 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 USP17L19D6RCP7 530 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 USP17L20D6RJB6 530 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 E9PMD0 336 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 SYF2O95926 243 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 TUBBP07437 444 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 PLCG2P16885 1265 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 ATP2B4P23634 1241 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 GGCXP38435 758 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 USP17L24Q0WX57 530 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 CCDC40Q4G0X9 1142 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 USP17L6PQ6QN14 398 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 CREG2Q8IUH2 290 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 TBC1D16Q8TBP0 767 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 FAM71BQ8TC56 605 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 RAB34Q9BZG1 259 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 ACBD3Q9H3P7 528 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 DDX4Q9NQI0 724 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 SNX12Q9UMY4 172 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 JRKLQ9Y4A0 524 aa10.97□□□□□ -0.65
UBE2D3-203ENST00000343106 PVALEFA0A1B0GWK0 134 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 SERPINB2P05120 415 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 IL1R1P14778 569 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 RNASE9P60153 205 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 DOK7Q18PE1 504 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 MAP9Q49MG5 647 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 CCDC181Q5TID7 509 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 CCNI2Q6ZMN8 369 aaPredicted RBP10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 MYOCDQ8IZQ8 938 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 GUF1Q8N442 669 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 GOLGA6L1Q8N7Z2 621 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 TRIM58Q8NG06 486 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 GOLGA5Q8TBA6 731 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 HAS1Q92839 578 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 MS4A14Q96JA4 679 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 TSG101Q99816 390 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 TSGA10Q9BZW7 698 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 SH2D4AQ9H788 454 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 LRRC4BQ9NT99 713 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 PANK4Q9NVE7 773 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 DMGDHQ9UI17 866 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 HPCAL4Q9UM19 191 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 PCDHA12Q9UN75 941 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 KIAA1024Q9UPX6 916 aa10.96□□□□□ -0.65
UBE2D3-203ENST00000343106 FAM196BA6NMK8 535 aa10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 ANKRD65E5RJM6 399 aa10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 STAT3P40763 770 aa10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 PPP1R2P41236 205 aa10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 SNAP25P60880 206 aa10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 MAPK8IP2Q13387 824 aaPredicted RBP10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 CCDC84Q86UT8 332 aaPredicted RBP10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 RBM17Q96I25 401 aaKnown RBP10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 PURBQ96QR8 312 aaKnown RBP10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 SELENOOQ9BVL4 669 aa10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 PSTPIP2Q9H939 334 aa10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 USP40Q9NVE5 1235 aa10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 PSD3Q9NYI0 1048 aa10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 STK17AQ9UEE5 414 aa10.96□□□□□ -0.66
UBE2D3-203ENST00000343106 PNMA6FA0A0J9YX94 578 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 ANO9A1A5B4 782 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 TRIM66O15016 1216 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 FGFR1OPO95684 399 aaKnown RBP10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 TTLL1O95922 423 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 SLC1A4P43007 532 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 NT5C2P49902 561 aa10.95□□□□□ -0.66
UBE2D3-203ENST00000343106 POLR2FP61218 127 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms