RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 METTL23Q86XA0 190 aa19.02■□□□□ 0.64
SMAD4-201ENST00000342988 CCDC90BQ9GZT6 254 aa19.02■□□□□ 0.64
SMAD4-201ENST00000342988 OLFML3Q9NRN5 406 aa19.02■□□□□ 0.64
SMAD4-201ENST00000342988 CCT5P48643 541 aa19.02■□□□□ 0.63
SMAD4-201ENST00000342988 EIF3BP55884 814 aaKnown RBP19.02■□□□□ 0.63
SMAD4-201ENST00000342988 INAQ16352 499 aa19.02■□□□□ 0.63
SMAD4-201ENST00000342988 OR8K1Q8NGG5 319 aa19.02■□□□□ 0.63
SMAD4-201ENST00000342988 TTC38Q5R3I4 469 aa19.02■□□□□ 0.63
SMAD4-201ENST00000342988 ANO5Q75V66 913 aa19.02■□□□□ 0.63
SMAD4-201ENST00000342988 IL16Q14005 1332 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 GOLGA8MH3BSY2 632 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 RHPN1Q8TCX5 695 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 RAPGEF5Q92565 580 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 TFAP4Q01664 338 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 ADALQ6DHV7 355 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 CAPN12Q6ZSI9 719 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 RPRD1BQ9NQG5 326 aaKnown RBP19.01■□□□□ 0.63
SMAD4-201ENST00000342988 MAPK8IP1Q9UQF2 711 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 DMC1Q14565 340 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 ARL13BQ3SXY8 428 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 TPTE2Q6XPS3 522 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 VCAM1P19320 739 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 SLC7A5P2Q9GIP4 190 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 MBD2Q9UBB5 411 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 PPARDQ03181 441 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 PLD3Q8IV08 490 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 ZNF555Q8NEP9 628 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 TBC1D7Q9P0N9 293 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 PI4KAP2A4QPH2 592 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 RAB42Q8N4Z0 105 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 PI4KAP1Q8N8J0 262 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 SLF1Q9BQI6 1058 aa19.01■□□□□ 0.63
SMAD4-201ENST00000342988 ANGEL1Q9UNK9 670 aaKnown RBP19.01■□□□□ 0.63
SMAD4-201ENST00000342988 KRT72Q14CN4 511 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 REXO1Q8N1G1 1221 aaKnown RBP19■□□□□ 0.63
SMAD4-201ENST00000342988 GLG1Q92896 1179 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 TSC22D4Q9Y3Q8 395 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 PJA2O43164 708 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 SLC1A4P43007 532 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 KCNA1Q09470 495 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 LRMPQ12912 555 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 CCDC142Q17RM4 750 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 KRT26Q7Z3Y9 468 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 RBM17Q96I25 401 aaKnown RBP19■□□□□ 0.63
SMAD4-201ENST00000342988 TMEM60Q9H2L4 133 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 SNTNA6NMZ2 147 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 GYG2O15488 501 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 PTK2Q05397 1052 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 MTX1Q13505 466 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 PIK3AP1Q6ZUJ8 805 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 RFX6Q8HWS3 928 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 DTX3LQ8TDB6 740 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 METTL14Q9HCE5 456 aaKnown RBP19■□□□□ 0.63
SMAD4-201ENST00000342988 FAM207AQ9NSI2 230 aaPredicted RBP19■□□□□ 0.63
SMAD4-201ENST00000342988 ARHGEF16Q5VV41 709 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 KCTD6Q8NC69 237 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 ANKRD36BP1Q96IX9 119 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 SEL1LQ9UBV2 794 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 WDR97A6NE52 1622 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 MYO1DO94832 1006 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 BUD13Q9BRD0 619 aaKnown RBP eCLIP19■□□□□ 0.631e-10■□□□□ 10.9
SMAD4-201ENST00000342988 HACD3Q9P035 362 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 RASSF9O75901 435 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 CDH2P19022 906 aaPredicted RBP19■□□□□ 0.63
SMAD4-201ENST00000342988 RINLQ6ZS11 566 aa19■□□□□ 0.63
SMAD4-201ENST00000342988 DDX39AO00148 427 aaKnown RBP18.99■□□□□ 0.63
SMAD4-201ENST00000342988 TXKP42681 527 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMAD4-201ENST00000342988 FIS1Q9Y3D6 152 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 POTEFA5A3E0 1075 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 BFSP2Q13515 415 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 SMCR8Q8TEV9 937 aaPredicted RBP18.99■□□□□ 0.63
SMAD4-201ENST00000342988 DYDC2Q96IM9 177 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 TBC1D23Q9NUY8 699 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 MT-ND3P03897 115 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 E4F1Q66K89 784 aaPredicted RBP18.99■□□□□ 0.63
SMAD4-201ENST00000342988 CA4P22748 312 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 CECR2Q9BXF3 1484 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 CTNND1O60716 968 aaKnown RBP18.99■□□□□ 0.63
SMAD4-201ENST00000342988 PRKCQQ04759 706 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 ARHGEF6Q15052 776 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 KRT77Q7Z794 578 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 OTULINQ96BN8 352 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 CNBD2Q96M20 576 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 MYO1FO00160 1098 aa18.99■□□□□ 0.63
SMAD4-201ENST00000342988 PAPOLAP51003 745 aaKnown RBP18.99■□□□□ 0.63
SMAD4-201ENST00000342988 KCNJ18B7U540 433 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 SMARCA1P28370 1054 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 KCNJ12Q14500 433 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 FAM102BQ5T8I3 360 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 CFLARO15519 480 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 RUNX1T1Q06455 604 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 MAP3K15Q6ZN16 1313 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 EPHB4P54760 987 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 GOLGA8FQ08AF8 430 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 GOLGA8DPQ0D2H9 430 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 RRP15Q9Y3B9 282 aaKnown RBP18.98■□□□□ 0.63
SMAD4-201ENST00000342988 TP53BP2Q13625 1128 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 FGD2Q7Z6J4 655 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 CNPY4Q8N129 248 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms