RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 OGFRQ9NZT2 677 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 CEMIPQ8WUJ3 1361 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 N4BP1O75113 896 aaKnown RBP16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 AKR1B1P15121 316 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 MRPS9P82933 396 aaKnown RBP16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 ZNF365Q70YC5 407 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 FAM76AQ8TAV0 307 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 TIGD1Q96MW7 591 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 MYO1AQ9UBC5 1043 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 PRKAG2Q9UGJ0 569 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 RPS6KA1Q15418 735 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 PPM1KQ8N3J5 372 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 GPR161Q8N6U8 529 aaKnown RBP16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 PRPF38AQ8NAV1 312 aaKnown RBP16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 PKNOX2Q96KN3 472 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 MED10Q9BTT4 135 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 PCDHB6Q9Y5E3 794 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 ELF2Q15723 593 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 ANKS4BQ8N8V4 417 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 IFT20Q8IY31 132 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 NEDD1Q8NHV4 660 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 PSMB7Q99436 277 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 USP17L15C9J2P7 530 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 USP17L13C9JLJ4 530 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 USP17L11C9JVI0 530 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 USP17L18D6R9N7 530 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 USP17L22D6RA61 530 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 USP17L17D6RBQ6 530 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 USP17L19D6RCP7 530 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 USP17L20D6RJB6 530 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 USP17L24Q0WX57 530 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 AP3B2Q13367 1082 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 USP17L6PQ6QN14 398 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 PEX26Q7Z412 305 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 EXOC8Q8IYI6 725 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 CCDC63Q8NA47 563 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 GIMAP7Q8NHV1 300 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 MXD3Q9BW11 206 aa16.53■□□□□ 0.24
PCDHB13-201ENST00000341948 GAP43P17677 238 aa16.52■□□□□ 0.24
PCDHB13-201ENST00000341948 STXBP2Q15833 593 aa16.52■□□□□ 0.24
PCDHB13-201ENST00000341948 SLC17A8Q8NDX2 589 aa16.52■□□□□ 0.24
PCDHB13-201ENST00000341948 PCDHA6Q9UN73 950 aa16.52■□□□□ 0.24
PCDHB13-201ENST00000341948 PCDHA8Q9Y5H6 950 aa16.52■□□□□ 0.24
PCDHB13-201ENST00000341948 GYS1P13807 737 aa16.52■□□□□ 0.24
PCDHB13-201ENST00000341948 RSBN1LQ6PCB5 846 aaPredicted RBP16.52■□□□□ 0.24
PCDHB13-201ENST00000341948 PARP2Q9UGN5 583 aa16.52■□□□□ 0.24
PCDHB13-201ENST00000341948 UTP11Q9Y3A2 253 aaKnown RBP16.52■□□□□ 0.24
PCDHB13-201ENST00000341948 PNPLA7Q6ZV29 1317 aa16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 MARK3P27448 753 aa16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 CFAP221Q4G0U5 840 aa16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 RIOK1Q9BRS2 568 aaKnown RBP16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 FAM204AQ9H8W3 233 aa16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 HESX1Q9UBX0 185 aa16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 STK17AQ9UEE5 414 aa16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 LRRC41Q15345 812 aa16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 C12orf60Q5U649 245 aa16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 CPLX4Q7Z7G2 160 aa16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 TDRD7Q8NHU6 1098 aaKnown RBP16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 FBF1Q8TES7 1133 aa16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 NLRP7Q8WX94 980 aa16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 HACL1Q9UJ83 578 aa16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 FAM169AQ9Y6X4 670 aa16.52■□□□□ 0.23
PCDHB13-201ENST00000341948 EBAG9O00559 213 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 XPOTO43592 962 aaKnown RBP16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 HMGCS2P54868 508 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 PSMD14O00487 310 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 ABL1P00519 1130 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 OSBPL5Q9H0X9 879 aaPredicted RBP16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 KCNK9Q9NPC2 374 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 SH3GLB2Q9NR46 395 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 GJB4Q9NTQ9 266 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 RFX1P22670 979 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 NR2F2P24468 414 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 CEP128Q6ZU80 1094 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 KIAA1524Q8TCG1 905 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 U2AF1L4Q8WU68 220 aaKnown RBP16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 E7EVH7 732 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 ANGEL2Q5VTE6 544 aaKnown RBP16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 NSUN6Q8TEA1 469 aaKnown RBP16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 MTA3Q9BTC8 594 aa16.51■□□□□ 0.23
PCDHB13-201ENST00000341948 ZBTB16Q05516 673 aa16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 RESTQ13127 1097 aa16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 PFKFB3Q16875 520 aaPredicted RBP16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 CCDC14Q49A88 953 aa16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 PPP1R16BQ96T49 567 aa16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 DESI2Q9BSY9 194 aa16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 ELP3Q9H9T3 547 aa16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 STIM2Q9P246 746 aa16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 ZSCAN20P17040 1043 aaPredicted RBP16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 GMPSP49915 693 aaPredicted RBP16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 TOB2Q14106 344 aaPredicted RBP16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 CTTNQ14247 550 aaKnown RBP16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 TLR3O15455 904 aaKnown RBP16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 GAS8O95995 478 aa16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 SLFN14P0C7P3 912 aa16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 LRFN2Q9ULH4 789 aa16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 UBN2Q6ZU65 1347 aa16.5■□□□□ 0.23
PCDHB13-201ENST00000341948 MTMR1Q13613 665 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms