RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 COL4A3BPQ9Y5P4 624 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 TOB1P50616 345 aaPredicted RBP12.88□□□□□ -0.35
TRAK1-202ENST00000341421 COL9A3Q14050 684 aaPredicted RBP12.88□□□□□ -0.35
TRAK1-202ENST00000341421 FBXO33Q7Z6M2 555 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 MSANTD4Q8NCY6 345 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 PSMB7Q99436 277 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 SPZ1Q9BXG8 430 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 SRP68Q9UHB9 627 aaKnown RBP12.88□□□□□ -0.35
TRAK1-202ENST00000341421 USP21Q9UK80 565 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 TNFAIP3P21580 790 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 HNRNPH1P31943 449 aaKnown RBP12.88□□□□□ -0.35
TRAK1-202ENST00000341421 ADAM9Q13443 819 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 TBC1D9BQ66K14 1250 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 PPP1R18Q6NYC8 613 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 VGLL2Q8N8G2 317 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 EEF2KMTQ96G04 330 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 IRX2Q9BZI1 471 aaPredicted RBP12.88□□□□□ -0.35
TRAK1-202ENST00000341421 MTRF1LQ9UGC7 380 aaKnown RBP12.88□□□□□ -0.35
TRAK1-202ENST00000341421 POLR2FP61218 127 aaKnown RBP12.88□□□□□ -0.35
TRAK1-202ENST00000341421 FBXW10Q5XX13 1052 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 PROM2Q8N271 834 aa12.88□□□□□ -0.35
TRAK1-202ENST00000341421 CEP104O60308 925 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 GCNT3O95395 438 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
TRAK1-202ENST00000341421 SEC23AQ15436 765 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 SNCBQ16143 134 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 PPP2R5EQ16537 467 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 FOXR1Q6PIV2 292 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 ADSSL1Q8N142 457 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 NEDD1Q8NHV4 660 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 SUGCTQ9HAC7 445 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 MTUS1Q9ULD2 1270 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 PCDHA1Q9Y5I3 950 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 PNMA6FA0A0J9YX94 578 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 TTC26A0AVF1 554 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 SLC8A1P32418 973 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 GRIN1Q05586 938 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 MTMR3Q13615 1198 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 NT5DC1Q5TFE4 455 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 CAPN11Q9UMQ6 739 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 MED1Q15648 1581 aaPredicted RBP12.87□□□□□ -0.35
TRAK1-202ENST00000341421 TRIM49BA6NDI0 452 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 GGCXP38435 758 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 TTC19Q6DKK2 380 aaPredicted RBP12.87□□□□□ -0.35
TRAK1-202ENST00000341421 PEX26Q7Z412 305 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 COG1Q8WTW3 980 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 ARHGEF35A5YM69 484 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 ERCC3P19447 782 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 CROCCP2Q86T23 111 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 PNKPQ96T60 521 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 KIAA1024Q9UPX6 916 aa12.87□□□□□ -0.35
TRAK1-202ENST00000341421 ATRNO75882 1429 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 STAT1P42224 750 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 ATP1A2P50993 1020 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 KIF11P52732 1056 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 EPHB4P54760 987 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 MTF1Q14872 753 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 SWT1Q5T5J6 900 aaKnown RBP12.86□□□□□ -0.35
TRAK1-202ENST00000341421 SLFN13Q68D06 897 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 FBXO11Q86XK2 927 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 AMNQ9BXJ7 453 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.86□□□□□ -0.35
TRAK1-202ENST00000341421 UTP11Q9Y3A2 253 aaKnown RBP12.86□□□□□ -0.35
TRAK1-202ENST00000341421 PDS5AQ29RF7 1337 aaKnown RBP12.86□□□□□ -0.35
TRAK1-202ENST00000341421 RHOBTB3O94955 611 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 CNPY4Q8N129 248 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 MYCT1Q8N699 235 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 RIOK1Q9BRS2 568 aaKnown RBP12.86□□□□□ -0.35
TRAK1-202ENST00000341421 NSRP1Q9H0G5 558 aaKnown RBP12.86□□□□□ -0.35
TRAK1-202ENST00000341421 PCDHA13Q9Y5I0 950 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 ZMYND10O75800 440 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 ZNF18P17022 549 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 EIF4A3P38919 411 aaKnown RBP12.86□□□□□ -0.35
TRAK1-202ENST00000341421 TXNRD1Q16881 649 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 CERKLQ49MI3 558 aaPredicted RBP12.86□□□□□ -0.35
TRAK1-202ENST00000341421 C10orf76Q5T2E6 689 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
TRAK1-202ENST00000341421 FAM196AQ6ZSG2 479 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 CPLX4Q7Z7G2 160 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 GUF1Q8N442 669 aaKnown RBP12.86□□□□□ -0.35
TRAK1-202ENST00000341421 RAB21Q9UL25 225 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 PCDHA6Q9UN73 950 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 PCDHA8Q9Y5H6 950 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 BCL9O00512 1426 aa12.86□□□□□ -0.35
TRAK1-202ENST00000341421 SERPINB2P05120 415 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 PRR16Q569H4 304 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 MSL3Q8N5Y2 521 aaKnown RBP12.85□□□□□ -0.35
TRAK1-202ENST00000341421 EDEM3Q9BZQ6 932 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 FAM217BQ9NTX9 383 aaPredicted RBP12.85□□□□□ -0.35
TRAK1-202ENST00000341421 PPP1R1BQ9UD71 204 aaPredicted RBP12.85□□□□□ -0.35
TRAK1-202ENST00000341421 RIC1Q4ADV7 1423 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 E7EVH7 732 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 USP14P54578 494 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 SEL1L2Q5TEA6 688 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 INTS5Q6P9B9 1019 aaKnown RBP12.85□□□□□ -0.35
TRAK1-202ENST00000341421 COA7Q96BR5 231 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 PPP1R3GB7ZBB8 358 aa12.85□□□□□ -0.35
TRAK1-202ENST00000341421 SERPING1P05155 500 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms