RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 JAG1P78504 1218 aa22.42■■□□□ 1.18
SPG7-202ENST00000341316 TATDN1Q6P1N9 297 aa22.42■■□□□ 1.18
SPG7-202ENST00000341316 KANSL2Q9H9L4 492 aa22.42■■□□□ 1.18
SPG7-202ENST00000341316 PCDHA1Q9Y5I3 950 aa22.42■■□□□ 1.18
SPG7-202ENST00000341316 ZNF646O15015 1829 aaPredicted RBP22.42■■□□□ 1.18
SPG7-202ENST00000341316 PVALEFA0A1B0GWK0 134 aa22.42■■□□□ 1.18
SPG7-202ENST00000341316 H0YIN7 160 aa22.42■■□□□ 1.18
SPG7-202ENST00000341316 GDF11O95390 407 aa22.42■■□□□ 1.18
SPG7-202ENST00000341316 SNAP25P60880 206 aa22.42■■□□□ 1.18
SPG7-202ENST00000341316 FKBP1AP62942 108 aaKnown RBP22.42■■□□□ 1.18
SPG7-202ENST00000341316 TBC1D8BQ0IIM8 1120 aa22.42■■□□□ 1.18
SPG7-202ENST00000341316 SLC35F6Q8N357 371 aa22.42■■□□□ 1.18
SPG7-202ENST00000341316 DDX12PQ92771 950 aa22.42■■□□□ 1.18
SPG7-202ENST00000341316 P2RX7Q99572 595 aaKnown RBP22.42■■□□□ 1.18
SPG7-202ENST00000341316 UBXN6Q9BZV1 441 aa22.42■■□□□ 1.18
SPG7-202ENST00000341316 EPN1Q9Y6I3 576 aaPredicted RBP22.42■■□□□ 1.18
SPG7-202ENST00000341316 MYH7BA7E2Y1 1941 aa22.42■■□□□ 1.18
SPG7-202ENST00000341316 NDUFA10O95299 355 aa22.41■■□□□ 1.18
SPG7-202ENST00000341316 PPP1R2P41236 205 aa22.41■■□□□ 1.18
SPG7-202ENST00000341316 MTIF2P46199 727 aaKnown RBP22.41■■□□□ 1.18
SPG7-202ENST00000341316 CDC37Q16543 378 aaPredicted RBP22.41■■□□□ 1.18
SPG7-202ENST00000341316 AOC3Q16853 763 aa22.41■■□□□ 1.18
SPG7-202ENST00000341316 HDLBPQ00341 1268 aaKnown RBP22.41■■□□□ 1.18
SPG7-202ENST00000341316 EHHADHQ08426 723 aa22.41■■□□□ 1.18
SPG7-202ENST00000341316 STYK1Q6J9G0 422 aa22.41■■□□□ 1.18
SPG7-202ENST00000341316 DCAF4Q8WV16 495 aa22.41■■□□□ 1.18
SPG7-202ENST00000341316 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.41■■□□□ 1.18
SPG7-202ENST00000341316 IDEP14735 1019 aa22.4■■□□□ 1.18
SPG7-202ENST00000341316 NOC4LQ9BVI4 516 aaKnown RBP22.4■■□□□ 1.18
SPG7-202ENST00000341316 TDRD3Q9H7E2 651 aaKnown RBP22.4■■□□□ 1.18
SPG7-202ENST00000341316 ZSWIM4Q9H7M6 989 aa22.4■■□□□ 1.18
SPG7-202ENST00000341316 ARFGAP3Q9NP61 516 aa22.4■■□□□ 1.18
SPG7-202ENST00000341316 TRIM10Q9UDY6 481 aa22.4■■□□□ 1.18
SPG7-202ENST00000341316 PCDHA12Q9UN75 941 aa22.4■■□□□ 1.18
SPG7-202ENST00000341316 ICA1Q05084 483 aa22.4■■□□□ 1.18
SPG7-202ENST00000341316 FAM114A1Q8IWE2 563 aa22.4■■□□□ 1.18
SPG7-202ENST00000341316 TFR2Q9UP52 801 aa22.4■■□□□ 1.18
SPG7-202ENST00000341316 TFRCP02786 760 aaKnown RBP22.39■■□□□ 1.17
SPG7-202ENST00000341316 OAS2P29728 719 aaKnown RBP22.39■■□□□ 1.17
SPG7-202ENST00000341316 LRRC41Q15345 812 aa22.39■■□□□ 1.17
SPG7-202ENST00000341316 SERPINA10Q9UK55 444 aa22.39■■□□□ 1.17
SPG7-202ENST00000341316 F5H6K3 240 aa22.38■■□□□ 1.17
SPG7-202ENST00000341316 MEIS2O14770 477 aa22.38■■□□□ 1.17
SPG7-202ENST00000341316 GCFC2P16383 781 aaKnown RBP22.38■■□□□ 1.17
SPG7-202ENST00000341316 TAL1P17542 331 aaPredicted RBP22.38■■□□□ 1.17
SPG7-202ENST00000341316 TRIM21P19474 475 aaKnown RBP22.38■■□□□ 1.17
SPG7-202ENST00000341316 KLRC3Q07444 240 aa22.38■■□□□ 1.17
SPG7-202ENST00000341316 RRP1BQ14684 758 aaKnown RBP22.38■■□□□ 1.17
SPG7-202ENST00000341316 GUF1Q8N442 669 aaKnown RBP22.38■■□□□ 1.17
SPG7-202ENST00000341316 C7orf43Q8WVR3 580 aa22.38■■□□□ 1.17
SPG7-202ENST00000341316 DNAJC19Q96DA6 116 aa22.38■■□□□ 1.17
SPG7-202ENST00000341316 MARCH6O60337 910 aa22.38■■□□□ 1.17
SPG7-202ENST00000341316 MEA1Q16626 185 aa22.38■■□□□ 1.17
SPG7-202ENST00000341316 TRIM34Q9BYJ4 488 aa22.38■■□□□ 1.17
SPG7-202ENST00000341316 ANO3Q9BYT9 981 aa22.38■■□□□ 1.17
SPG7-202ENST00000341316 ARFGEF1Q9Y6D6 1849 aa22.38■■□□□ 1.17
SPG7-202ENST00000341316 CHMP4BP1P59074 171 aa22.37■■□□□ 1.17
SPG7-202ENST00000341316 HERVK_113P62684 666 aa22.37■■□□□ 1.17
SPG7-202ENST00000341316 SMC1AQ14683 1233 aaKnown RBP22.37■■□□□ 1.17
SPG7-202ENST00000341316 TMEM179Q6ZVK1 233 aa22.37■■□□□ 1.17
SPG7-202ENST00000341316 ZCCHC17Q9NP64 241 aaKnown RBP22.37■■□□□ 1.17
SPG7-202ENST00000341316 KCNMB3Q9NPA1 279 aa22.37■■□□□ 1.17
SPG7-202ENST00000341316 E9PMD0 336 aa22.37■■□□□ 1.17
SPG7-202ENST00000341316 ABCB5Q2M3G0 1257 aa22.37■■□□□ 1.17
SPG7-202ENST00000341316 SRGAP1Q7Z6B7 1085 aa22.37■■□□□ 1.17
SPG7-202ENST00000341316 PRMT6Q96LA8 375 aaPredicted RBP22.37■■□□□ 1.17
SPG7-202ENST00000341316 ERGIC2Q96RQ1 377 aa22.37■■□□□ 1.17
SPG7-202ENST00000341316 FUT8Q9BYC5 575 aa22.37■■□□□ 1.17
SPG7-202ENST00000341316 CDC23Q9UJX2 597 aa22.37■■□□□ 1.17
SPG7-202ENST00000341316 CTAGE9A4FU28 777 aa22.36■■□□□ 1.17
SPG7-202ENST00000341316 NPM3O75607 178 aaKnown RBP22.36■■□□□ 1.17
SPG7-202ENST00000341316 NDUFB10O96000 172 aa22.36■■□□□ 1.17
SPG7-202ENST00000341316 STAT3P40763 770 aa22.36■■□□□ 1.17
SPG7-202ENST00000341316 KIF4BQ2VIQ3 1234 aa22.36■■□□□ 1.17
SPG7-202ENST00000341316 HYIQ5T013 277 aa22.36■■□□□ 1.17
SPG7-202ENST00000341316 FGFBP2Q9BYJ0 223 aa22.36■■□□□ 1.17
SPG7-202ENST00000341316 PUF60Q9UHX1 559 aaKnown RBP22.36■■□□□ 1.17
SPG7-202ENST00000341316 YDJCA8MPS7 323 aa22.36■■□□□ 1.17
SPG7-202ENST00000341316 LRRC55Q6ZSA7 311 aa22.36■■□□□ 1.17
SPG7-202ENST00000341316 RETREG2Q8NC44 543 aa22.36■■□□□ 1.17
SPG7-202ENST00000341316 CRYGNQ8WXF5 182 aa22.36■■□□□ 1.17
SPG7-202ENST00000341316 PCMTD1Q96MG8 357 aaPredicted RBP22.36■■□□□ 1.17
SPG7-202ENST00000341316 NUP58Q9BVL2 599 aa22.36■■□□□ 1.17
SPG7-202ENST00000341316 KIAA1024Q9UPX6 916 aa22.36■■□□□ 1.17
SPG7-202ENST00000341316 ERCC3P19447 782 aa22.35■■□□□ 1.17
SPG7-202ENST00000341316 USP11P51784 963 aa22.35■■□□□ 1.17
SPG7-202ENST00000341316 COASYQ13057 564 aa22.35■■□□□ 1.17
SPG7-202ENST00000341316 VWA3BQ502W6 1294 aa22.35■■□□□ 1.17
SPG7-202ENST00000341316 CALCOCO1Q9P1Z2 691 aa22.35■■□□□ 1.17
SPG7-202ENST00000341316 GUCA1BQ9UMX6 200 aa22.35■■□□□ 1.17
SPG7-202ENST00000341316 CYP3A7-CYP3A51PA0A087WV96 503 aa22.34■■□□□ 1.17
SPG7-202ENST00000341316 POTEB3A0JP26 581 aa22.34■■□□□ 1.17
SPG7-202ENST00000341316 POTECB2RU33 542 aa22.34■■□□□ 1.17
SPG7-202ENST00000341316 EPHB6O15197 1021 aa22.34■■□□□ 1.17
SPG7-202ENST00000341316 GH2P01242 217 aa22.34■■□□□ 1.17
SPG7-202ENST00000341316 SSBP05455 408 aaKnown RBP eCLIP22.34■■□□□ 1.17
SPG7-202ENST00000341316 CYP3A7P24462 503 aa22.34■■□□□ 1.17
SPG7-202ENST00000341316 ZBED6P86452 979 aa22.34■■□□□ 1.17
SPG7-202ENST00000341316 LONRF2Q1L5Z9 754 aa22.34■■□□□ 1.17
SPG7-202ENST00000341316 TSR1Q2NL82 804 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 203.7 ms