RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 TMEM119Q4V9L6 283 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 VWA3BQ502W6 1294 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 TAF3Q5VWG9 929 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 FOXR2Q6PJQ5 311 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 DYMQ7RTS9 669 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 CLEC10AQ8IUN9 316 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 ADGRF4Q8IZF3 695 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 SNX29Q8TEQ0 813 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 LRRC27Q9C0I9 530 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 COA1Q9GZY4 146 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 NDST4Q9H3R1 872 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 ZCCHC17Q9NP64 241 aaKnown RBP16.2■□□□□ 0.18
TDP2-201ENST00000341060 HDAC6Q9UBN7 1215 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 SIK3Q9Y2K2 1263 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 FGFR1OPO95684 399 aaKnown RBP16.19■□□□□ 0.18
TDP2-201ENST00000341060 TNNI2P48788 182 aa16.19■□□□□ 0.18
TDP2-201ENST00000341060 PSMD2Q13200 908 aa16.19■□□□□ 0.18
TDP2-201ENST00000341060 MAN2A1Q16706 1144 aa16.19■□□□□ 0.18
TDP2-201ENST00000341060 GPCPD1Q9NPB8 672 aa16.19■□□□□ 0.18
TDP2-201ENST00000341060 NRXN2Q9P2S2 1712 aa16.19■□□□□ 0.18
TDP2-201ENST00000341060 PPP1R11O60927 126 aaPredicted RBP16.19■□□□□ 0.18
TDP2-201ENST00000341060 VAV2P52735 878 aa16.19■□□□□ 0.18
TDP2-201ENST00000341060 DDR1Q08345 913 aa16.19■□□□□ 0.18
TDP2-201ENST00000341060 GPATCH4Q5T3I0 446 aaKnown RBP16.19■□□□□ 0.18
TDP2-201ENST00000341060 CCDC84Q86UT8 332 aaPredicted RBP16.19■□□□□ 0.18
TDP2-201ENST00000341060 COL23A1Q86Y22 540 aaPredicted RBP16.19■□□□□ 0.18
TDP2-201ENST00000341060 SP8Q8IXZ3 490 aa16.19■□□□□ 0.18
TDP2-201ENST00000341060 DDX12PQ92771 950 aa16.19■□□□□ 0.18
TDP2-201ENST00000341060 RPGRIP1Q96KN7 1286 aa16.19■□□□□ 0.18
TDP2-201ENST00000341060 CAMKK2Q96RR4 588 aa16.19■□□□□ 0.18
TDP2-201ENST00000341060 NUDT12Q9BQG2 462 aa16.19■□□□□ 0.18
TDP2-201ENST00000341060 TSGA10Q9BZW7 698 aa16.19■□□□□ 0.18
TDP2-201ENST00000341060 H3BQF6 201 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 POLRMTO00411 1230 aaKnown RBP16.18■□□□□ 0.18
TDP2-201ENST00000341060 PPEF1O14829 653 aaPredicted RBP16.18■□□□□ 0.18
TDP2-201ENST00000341060 GPS2Q13227 327 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 LRRC55Q6ZSA7 311 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 KCNK18Q7Z418 384 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 DEFB132Q7Z7B7 95 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 CERS5Q8N5B7 392 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 CUL5Q93034 780 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 CCDC42Q96M95 316 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 ERICH4A6NGS2 130 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 ZNF263O14978 683 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 EIF3JO75822 258 aaKnown RBP16.18■□□□□ 0.18
TDP2-201ENST00000341060 SHMT1P34896 483 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 KIF5AQ12840 1032 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 UBE2SQ16763 222 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 HAS1Q92839 578 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 MMS19Q96T76 1030 aa16.18■□□□□ 0.18
TDP2-201ENST00000341060 DDX25Q9UHL0 483 aaKnown RBP16.18■□□□□ 0.18
TDP2-201ENST00000341060 KIF13BQ9NQT8 1826 aa16.17■□□□□ 0.18
TDP2-201ENST00000341060 F8W031 263 aaPredicted RBP16.17■□□□□ 0.18
TDP2-201ENST00000341060 ZBTB5O15062 677 aa16.17■□□□□ 0.18
TDP2-201ENST00000341060 IDEP14735 1019 aa16.17■□□□□ 0.18
TDP2-201ENST00000341060 GCFC2P16383 781 aaKnown RBP16.17■□□□□ 0.18
TDP2-201ENST00000341060 HMGB2P26583 209 aaKnown RBP16.17■□□□□ 0.18
TDP2-201ENST00000341060 CYP27A1Q02318 531 aa16.17■□□□□ 0.18
TDP2-201ENST00000341060 CKAP4Q07065 602 aaKnown RBP16.17■□□□□ 0.18
TDP2-201ENST00000341060 SF3B2Q13435 895 aaKnown RBP16.17■□□□□ 0.18
TDP2-201ENST00000341060 SEPT2Q15019 361 aa16.17■□□□□ 0.18
TDP2-201ENST00000341060 SPA17Q15506 151 aa16.17■□□□□ 0.18
TDP2-201ENST00000341060 MTMR8Q96EF0 704 aa16.17■□□□□ 0.18
TDP2-201ENST00000341060 SUGCTQ9HAC7 445 aa16.17■□□□□ 0.18
TDP2-201ENST00000341060 RIMBP2O15034 1052 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 EPHB6O15197 1021 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 LCA5LO95447 670 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 PLEKP08567 350 aaPredicted RBP16.16■□□□□ 0.18
TDP2-201ENST00000341060 MRPL12P52815 198 aaKnown RBP16.16■□□□□ 0.18
TDP2-201ENST00000341060 USP14P54578 494 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 SECISBP2LQ93073 1101 aaKnown RBP16.16■□□□□ 0.18
TDP2-201ENST00000341060 PDE11AQ9HCR9 933 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 FAM207AQ9NSI2 230 aaPredicted RBP16.16■□□□□ 0.18
TDP2-201ENST00000341060 ARHGAP20Q9P2F6 1191 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 ATP6V0A2Q9Y487 856 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 DUSP10Q9Y6W6 482 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 SRGAP2O75044 1071 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 MCM3P25205 808 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 CASP8Q14790 479 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 HYIQ5T013 277 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 TTBK2Q6IQ55 1244 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 DNAJC19Q96DA6 116 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 TSG101Q99816 390 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 IFIH1Q9BYX4 1025 aaKnown RBP16.16■□□□□ 0.18
TDP2-201ENST00000341060 USP40Q9NVE5 1235 aa16.16■□□□□ 0.18
TDP2-201ENST00000341060 KDM3AQ9Y4C1 1321 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 MACROD2A1Z1Q3 448 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 KIF11P52732 1056 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 COASYQ13057 564 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 ECM1Q16610 540 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 ZCWPW2Q504Y3 356 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 C2CD5Q86YS7 1000 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 TRIM58Q8NG06 486 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 NT5C3AQ9H0P0 336 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 COL11A2P13942 1736 aaPredicted RBP16.15■□□□□ 0.18
TDP2-201ENST00000341060 TARSL2A2RTX5 802 aaKnown RBP16.15■□□□□ 0.18
TDP2-201ENST00000341060 USO1O60763 962 aaKnown RBP16.15■□□□□ 0.18
TDP2-201ENST00000341060 KRT26Q7Z3Y9 468 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 MYOCDQ8IZQ8 938 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 TXLNBQ8N3L3 684 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms