RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 KIAA1217Q5T5P2 1943 aa17.78■□□□□ 0.44
VAPA-201ENST00000340541 GCOM1H8Y6P7 765 aaPredicted RBP17.77■□□□□ 0.44
VAPA-201ENST00000340541 POLR2MP0CAP2 368 aa17.77■□□□□ 0.44
VAPA-201ENST00000340541 EIF2AK2P19525 551 aaKnown RBP17.77■□□□□ 0.44
VAPA-201ENST00000340541 DUSP28Q4G0W2 176 aa17.77■□□□□ 0.44
VAPA-201ENST00000340541 RNPC3Q96LT9 517 aaKnown RBP17.77■□□□□ 0.44
VAPA-201ENST00000340541 FAM161BQ96MY7 647 aa17.77■□□□□ 0.44
VAPA-201ENST00000340541 IWS1Q96ST2 819 aa17.77■□□□□ 0.44
VAPA-201ENST00000340541 MPHOSPH6Q99547 160 aaKnown RBP17.77■□□□□ 0.44
VAPA-201ENST00000340541 CDX2Q99626 313 aaPredicted RBP17.77■□□□□ 0.44
VAPA-201ENST00000340541 UPF3BQ9BZI7 483 aaKnown RBP17.77■□□□□ 0.44
VAPA-201ENST00000340541 A0A0U1RQG5 324 aaPredicted RBP17.76■□□□□ 0.43
VAPA-201ENST00000340541 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.76■□□□□ 0.43
VAPA-201ENST00000340541 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.76■□□□□ 0.43
VAPA-201ENST00000340541 B4DLN1 442 aa17.76■□□□□ 0.43
VAPA-201ENST00000340541 ARVCFO00192 962 aa17.76■□□□□ 0.43
VAPA-201ENST00000340541 CABYRO75952 493 aa17.76■□□□□ 0.43
VAPA-201ENST00000340541 ADD1P35611 737 aaKnown RBP17.76■□□□□ 0.43
VAPA-201ENST00000340541 MRPL12P52815 198 aaKnown RBP17.76■□□□□ 0.43
VAPA-201ENST00000340541 ARHGEF16Q5VV41 709 aa17.76■□□□□ 0.43
VAPA-201ENST00000340541 MFSD5Q6N075 450 aa17.76■□□□□ 0.43
VAPA-201ENST00000340541 TLK2Q86UE8 772 aa17.76■□□□□ 0.43
VAPA-201ENST00000340541 VTI1AQ96AJ9 217 aa17.76■□□□□ 0.43
VAPA-201ENST00000340541 IL17RAQ96F46 866 aa17.76■□□□□ 0.43
VAPA-201ENST00000340541 PDCD2LQ9BRP1 358 aa17.76■□□□□ 0.43
VAPA-201ENST00000340541 WDR11Q9BZH6 1224 aa17.76■□□□□ 0.43
VAPA-201ENST00000340541 TBX21Q9UL17 535 aa17.76■□□□□ 0.43
VAPA-201ENST00000340541 Q9Y3F1 56 aa17.76■□□□□ 0.43
VAPA-201ENST00000340541 CYP46A1Q9Y6A2 500 aa17.76■□□□□ 0.43
VAPA-201ENST00000340541 FRMPD4Q14CM0 1322 aa17.75■□□□□ 0.43
VAPA-201ENST00000340541 PIK3CDO00329 1044 aa17.75■□□□□ 0.43
VAPA-201ENST00000340541 MEIS2O14770 477 aa17.75■□□□□ 0.43
VAPA-201ENST00000340541 TLR3O15455 904 aaKnown RBP17.75■□□□□ 0.43
VAPA-201ENST00000340541 ARIH2O95376 493 aa17.75■□□□□ 0.43
VAPA-201ENST00000340541 NR3C2P08235 984 aa17.75■□□□□ 0.43
VAPA-201ENST00000340541 METAP2P50579 478 aaKnown RBP eCLIP17.75■□□□□ 0.43
VAPA-201ENST00000340541 EPHB4P54760 987 aa17.75■□□□□ 0.43
VAPA-201ENST00000340541 BEX3Q00994 111 aa17.75■□□□□ 0.43
VAPA-201ENST00000340541 PPP2R5BQ15173 497 aa17.75■□□□□ 0.43
VAPA-201ENST00000340541 STXBP2Q15833 593 aa17.75■□□□□ 0.43
VAPA-201ENST00000340541 TYW1BQ6NUM6 668 aa17.75■□□□□ 0.43
VAPA-201ENST00000340541 CCDC62Q6P9F0 684 aa17.75■□□□□ 0.43
VAPA-201ENST00000340541 NOL8Q76FK4 1167 aaKnown RBP17.75■□□□□ 0.43
VAPA-201ENST00000340541 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.75■□□□□ 0.434e-6■□□□□ 8.1
VAPA-201ENST00000340541 IL31RAQ8NI17 732 aa17.75■□□□□ 0.43
VAPA-201ENST00000340541 SCFD2Q8WU76 684 aa17.75■□□□□ 0.43
VAPA-201ENST00000340541 GPKOWQ92917 476 aaPredicted RBP eCLIP17.75■□□□□ 0.431e-7■■□□□ 14.2
VAPA-201ENST00000340541 NAP1L2Q9ULW6 460 aaPredicted RBP17.75■□□□□ 0.43
VAPA-201ENST00000340541 DYNC1LI2O43237 492 aaPredicted RBP17.74■□□□□ 0.43
VAPA-201ENST00000340541 RGS20O76081 388 aa17.74■□□□□ 0.43
VAPA-201ENST00000340541 PDIA3P30101 505 aaKnown RBP17.74■□□□□ 0.43
VAPA-201ENST00000340541 ANAPC15P60006 121 aa17.74■□□□□ 0.43
VAPA-201ENST00000340541 PPIGQ13427 754 aaKnown RBP eCLIP17.74■□□□□ 0.43
VAPA-201ENST00000340541 PGM5Q15124 567 aa17.74■□□□□ 0.43
VAPA-201ENST00000340541 WWC2Q6AWC2 1192 aa17.74■□□□□ 0.43
VAPA-201ENST00000340541 USP17L6PQ6QN14 398 aa17.74■□□□□ 0.43
VAPA-201ENST00000340541 VSIG10LQ86VR7 867 aa17.74■□□□□ 0.43
VAPA-201ENST00000340541 FCHSD1Q86WN1 690 aa17.74■□□□□ 0.43
VAPA-201ENST00000340541 SLC43A3Q8NBI5 491 aa17.74■□□□□ 0.43
VAPA-201ENST00000340541 TTYH1Q9H313 450 aaPredicted RBP17.74■□□□□ 0.43
VAPA-201ENST00000340541 V9GY48 417 aaPredicted RBP17.74■□□□□ 0.43
VAPA-201ENST00000340541 CUL9Q8IWT3 2517 aa17.73■□□□□ 0.43
VAPA-201ENST00000340541 ZEB2O60315 1214 aa17.73■□□□□ 0.43
VAPA-201ENST00000340541 EIF3JO75822 258 aaKnown RBP17.73■□□□□ 0.43
VAPA-201ENST00000340541 NTRK3Q16288 839 aa17.73■□□□□ 0.43
VAPA-201ENST00000340541 FSCN1Q16658 493 aaKnown RBP17.73■□□□□ 0.43
VAPA-201ENST00000340541 C8orf34Q49A92 452 aa17.73■□□□□ 0.43
VAPA-201ENST00000340541 HEATR3Q7Z4Q2 680 aa17.73■□□□□ 0.43
VAPA-201ENST00000340541 TMEM199Q8N511 208 aa17.73■□□□□ 0.43
VAPA-201ENST00000340541 COPS5Q92905 334 aa17.73■□□□□ 0.43
VAPA-201ENST00000340541 AP5M1Q9H0R1 490 aa17.73■□□□□ 0.43
VAPA-201ENST00000340541 CCDC196A0A1B0GTZ2 297 aa17.72■□□□□ 0.43
VAPA-201ENST00000340541 CD4P01730 458 aa17.72■□□□□ 0.43
VAPA-201ENST00000340541 TXNP10599 105 aaKnown RBP17.72■□□□□ 0.43
VAPA-201ENST00000340541 SEPT14Q6ZU15 432 aa17.72■□□□□ 0.43
VAPA-201ENST00000340541 FAM126BQ8IXS8 530 aa17.72■□□□□ 0.43
VAPA-201ENST00000340541 PSTPIP2Q9H939 334 aa17.72■□□□□ 0.43
VAPA-201ENST00000340541 PDRG1Q9NUG6 133 aa17.72■□□□□ 0.43
VAPA-201ENST00000340541 STXBP3O00186 592 aa17.71■□□□□ 0.43
VAPA-201ENST00000340541 NKRFO15226 690 aaKnown RBP eCLIP17.71■□□□□ 0.432e-10■■■□□ 15.3
VAPA-201ENST00000340541 MYCLP12524 364 aaPredicted RBP17.71■□□□□ 0.43
VAPA-201ENST00000340541 TTLL4Q14679 1199 aa17.71■□□□□ 0.43
VAPA-201ENST00000340541 MAFAQ8NHW3 353 aaPredicted RBP17.71■□□□□ 0.43
VAPA-201ENST00000340541 ZFP91Q96JP5 570 aaPredicted RBP17.71■□□□□ 0.43
VAPA-201ENST00000340541 LARP6Q9BRS8 491 aaKnown RBP17.71■□□□□ 0.43
VAPA-201ENST00000340541 NCOA5Q9HCD5 579 aaKnown RBP17.71■□□□□ 0.43
VAPA-201ENST00000340541 UNC80Q8N2C7 3258 aa17.71■□□□□ 0.42
VAPA-201ENST00000340541 EIF5BO60841 1220 aaKnown RBP17.7■□□□□ 0.42
VAPA-201ENST00000340541 CCT2P78371 535 aaKnown RBP17.7■□□□□ 0.42
VAPA-201ENST00000340541 MRPS9P82933 396 aaKnown RBP17.7■□□□□ 0.42
VAPA-201ENST00000340541 PKN1Q16512 942 aa17.7■□□□□ 0.42
VAPA-201ENST00000340541 UBE2SQ16763 222 aa17.7■□□□□ 0.42
VAPA-201ENST00000340541 PFKFB3Q16875 520 aaPredicted RBP17.7■□□□□ 0.42
VAPA-201ENST00000340541 TMEM240Q5SV17 173 aa17.7■□□□□ 0.42
VAPA-201ENST00000340541 RASIP1Q5U651 963 aa17.7■□□□□ 0.42
VAPA-201ENST00000340541 PPP1R18Q6NYC8 613 aa17.7■□□□□ 0.42
VAPA-201ENST00000340541 CXCL17Q6UXB2 119 aa17.7■□□□□ 0.42
VAPA-201ENST00000340541 OR6J1Q8NGC5 347 aa17.7■□□□□ 0.42
VAPA-201ENST00000340541 SMARCC2Q8TAQ2 1214 aa17.7■□□□□ 0.42
VAPA-201ENST00000340541 ZNF274Q96GC6 653 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms