RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 USP17L6PQ6QN14 398 aa16.85■□□□□ 0.29
ERCC1-203ENST00000340192 VSIG10LQ86VR7 867 aa16.85■□□□□ 0.29
ERCC1-203ENST00000340192 BADQ92934 168 aa16.85■□□□□ 0.29
ERCC1-203ENST00000340192 BRF1Q92994 677 aa16.85■□□□□ 0.29
ERCC1-203ENST00000340192 TMEM39AQ9NV64 488 aa16.85■□□□□ 0.29
ERCC1-203ENST00000340192 CNTNAP5Q8WYK1 1306 aa16.85■□□□□ 0.29
ERCC1-203ENST00000340192 A6NJR5 290 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 PIK3CDO00329 1044 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 MEIS2O14770 477 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 KIAA0355O15063 1070 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 RGS20O76081 388 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 MYL3P08590 195 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 ITGB8P26012 769 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 CCND2P30279 289 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 RCAN1P53805 252 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 PSMC6P62333 389 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 PURAQ00577 322 aaKnown RBP16.84■□□□□ 0.29
ERCC1-203ENST00000340192 FUT2Q10981 343 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 BRDTQ58F21 947 aaPredicted RBP16.84■□□□□ 0.29
ERCC1-203ENST00000340192 HEATR3Q7Z4Q2 680 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 TDHQ8IZJ6 230 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 SLC43A3Q8NBI5 491 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 SMARCC2Q8TAQ2 1214 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 CUL5Q93034 780 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 FAM217BQ9NTX9 383 aaPredicted RBP16.84■□□□□ 0.29
ERCC1-203ENST00000340192 POLR3EQ9NVU0 708 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 DDX41Q9UJV9 622 aaKnown RBP16.84■□□□□ 0.29
ERCC1-203ENST00000340192 MRVI1Q9Y6F6 885 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 GRIN2DO15399 1336 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 FRMPD4Q14CM0 1322 aa16.84■□□□□ 0.29
ERCC1-203ENST00000340192 GH1P01241 217 aa16.83■□□□□ 0.28
ERCC1-203ENST00000340192 CDC27P30260 824 aa16.83■□□□□ 0.28
ERCC1-203ENST00000340192 METAP2P50579 478 aaKnown RBP eCLIP16.83■□□□□ 0.28
ERCC1-203ENST00000340192 ARHGAP1Q07960 439 aa16.83■□□□□ 0.28
ERCC1-203ENST00000340192 FAM126BQ8IXS8 530 aa16.83■□□□□ 0.28
ERCC1-203ENST00000340192 FBXL16Q8N461 479 aa16.83■□□□□ 0.28
ERCC1-203ENST00000340192 GPKOWQ92917 476 aaPredicted RBP eCLIP16.83■□□□□ 0.28
ERCC1-203ENST00000340192 ZFP91Q96JP5 570 aaPredicted RBP16.83■□□□□ 0.28
ERCC1-203ENST00000340192 PSTPIP2Q9H939 334 aa16.83■□□□□ 0.28
ERCC1-203ENST00000340192 SCN10AQ9Y5Y9 1956 aa16.83■□□□□ 0.28
ERCC1-203ENST00000340192 TLR3O15455 904 aaKnown RBP16.82■□□□□ 0.28
ERCC1-203ENST00000340192 RAG1P15918 1043 aa16.82■□□□□ 0.28
ERCC1-203ENST00000340192 WWC2Q6AWC2 1192 aa16.82■□□□□ 0.28
ERCC1-203ENST00000340192 RUFY3Q7L099 469 aa16.82■□□□□ 0.28
ERCC1-203ENST00000340192 AFG1LQ8WV93 481 aa16.82■□□□□ 0.28
ERCC1-203ENST00000340192 MTG1Q9BT17 334 aaPredicted RBP16.82■□□□□ 0.28
ERCC1-203ENST00000340192 AGXT2Q9BYV1 514 aa16.82■□□□□ 0.28
ERCC1-203ENST00000340192 ZSWIM6Q9HCJ5 1215 aa16.82■□□□□ 0.28
ERCC1-203ENST00000340192 TBX21Q9UL17 535 aa16.82■□□□□ 0.28
ERCC1-203ENST00000340192 V9GY48 417 aaPredicted RBP16.82■□□□□ 0.28
ERCC1-203ENST00000340192 DOCK5Q9H7D0 1870 aa16.82■□□□□ 0.28
ERCC1-203ENST00000340192 NID2Q14112 1375 aa16.81■□□□□ 0.28
ERCC1-203ENST00000340192 CCDC196A0A1B0GTZ2 297 aa16.81■□□□□ 0.28
ERCC1-203ENST00000340192 KPNA6O60684 536 aa16.81■□□□□ 0.28
ERCC1-203ENST00000340192 CD4P01730 458 aa16.81■□□□□ 0.28
ERCC1-203ENST00000340192 MMP3P08254 477 aa16.81■□□□□ 0.28
ERCC1-203ENST00000340192 ADD1P35611 737 aaKnown RBP16.81■□□□□ 0.28
ERCC1-203ENST00000340192 MRPS9P82933 396 aaKnown RBP16.81■□□□□ 0.28
ERCC1-203ENST00000340192 KCNV1Q6PIU1 500 aa16.81■□□□□ 0.28
ERCC1-203ENST00000340192 SEZ6LQ9BYH1 1024 aa16.81■□□□□ 0.28
ERCC1-203ENST00000340192 CYP46A1Q9Y6A2 500 aa16.81■□□□□ 0.28
ERCC1-203ENST00000340192 SOX1O00570 391 aaPredicted RBP16.8■□□□□ 0.28
ERCC1-203ENST00000340192 TIMP1P01033 207 aa16.8■□□□□ 0.28
ERCC1-203ENST00000340192 SP2Q02086 613 aa16.8■□□□□ 0.28
ERCC1-203ENST00000340192 UBE2SQ16763 222 aa16.8■□□□□ 0.28
ERCC1-203ENST00000340192 PCNX4Q63HM2 1172 aa16.8■□□□□ 0.28
ERCC1-203ENST00000340192 DHX37Q8IY37 1157 aaKnown RBP16.8■□□□□ 0.28
ERCC1-203ENST00000340192 EMID1Q96A84 441 aaPredicted RBP16.8■□□□□ 0.28
ERCC1-203ENST00000340192 TRPV6Q9H1D0 765 aa16.8■□□□□ 0.28
ERCC1-203ENST00000340192 STXBP3O00186 592 aa16.79■□□□□ 0.28
ERCC1-203ENST00000340192 B4GALT4O60513 344 aa16.79■□□□□ 0.28
ERCC1-203ENST00000340192 STAM2O75886 525 aa16.79■□□□□ 0.28
ERCC1-203ENST00000340192 TGFB3P10600 412 aa16.79■□□□□ 0.28
ERCC1-203ENST00000340192 NAPAP54920 295 aa16.79■□□□□ 0.28
ERCC1-203ENST00000340192 LAMC2Q13753 1193 aa16.79■□□□□ 0.28
ERCC1-203ENST00000340192 TOB2Q14106 344 aaPredicted RBP16.79■□□□□ 0.28
ERCC1-203ENST00000340192 NBPF20Q3BBV1 942 aa16.79■□□□□ 0.28
ERCC1-203ENST00000340192 CELF3Q5SZQ8 465 aaKnown RBP16.79■□□□□ 0.28
ERCC1-203ENST00000340192 TYW1BQ6NUM6 668 aa16.79■□□□□ 0.28
ERCC1-203ENST00000340192 PPTC7Q8NI37 304 aa16.79■□□□□ 0.28
ERCC1-203ENST00000340192 INPP4AQ96PE3 977 aaPredicted RBP16.79■□□□□ 0.28
ERCC1-203ENST00000340192 UPF3BQ9BZI7 483 aaKnown RBP16.79■□□□□ 0.28
ERCC1-203ENST00000340192 TM6SF1Q9BZW5 370 aa16.79■□□□□ 0.28
ERCC1-203ENST00000340192 ALDH8A1Q9H2A2 487 aaPredicted RBP16.79■□□□□ 0.28
ERCC1-203ENST00000340192 RTEL1Q9NZ71 1219 aa16.79■□□□□ 0.28
ERCC1-203ENST00000340192 hCG_1984214I3L0E3 225 aa16.78■□□□□ 0.28
ERCC1-203ENST00000340192 SORBS3O60504 671 aa16.78■□□□□ 0.28
ERCC1-203ENST00000340192 GGPS1O95749 300 aa16.78■□□□□ 0.28
ERCC1-203ENST00000340192 UBA1P22314 1058 aaKnown RBP16.78■□□□□ 0.28
ERCC1-203ENST00000340192 PDIA3P30101 505 aaKnown RBP16.78■□□□□ 0.28
ERCC1-203ENST00000340192 EVCP57679 992 aa16.78■□□□□ 0.28
ERCC1-203ENST00000340192 FPGSQ05932 587 aa16.78■□□□□ 0.28
ERCC1-203ENST00000340192 DGKDQ16760 1214 aa16.78■□□□□ 0.28
ERCC1-203ENST00000340192 LRIT3Q3SXY7 679 aa16.78■□□□□ 0.28
ERCC1-203ENST00000340192 GNPTABQ3T906 1256 aa16.78■□□□□ 0.28
ERCC1-203ENST00000340192 MYSM1Q5VVJ2 828 aa16.78■□□□□ 0.28
ERCC1-203ENST00000340192 PPP1R18Q6NYC8 613 aa16.78■□□□□ 0.28
ERCC1-203ENST00000340192 XRRA1Q6P2D8 792 aa16.78■□□□□ 0.28
ERCC1-203ENST00000340192 ZNF713Q8N859 430 aaPredicted RBP16.78■□□□□ 0.28
ERCC1-203ENST00000340192 PPP1R13LQ8WUF5 828 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms