RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CTDNEP1O95476 244 aa17.5■□□□□ 0.39
UBE3B-201ENST00000340074 GJA9P57773 515 aa17.5■□□□□ 0.39
UBE3B-201ENST00000340074 RABEP1Q15276 862 aa17.5■□□□□ 0.39
UBE3B-201ENST00000340074 KLHDC9Q8NEP7 349 aa17.5■□□□□ 0.39
UBE3B-201ENST00000340074 CCDC12Q8WUD4 166 aaPredicted RBP17.5■□□□□ 0.39
UBE3B-201ENST00000340074 SENP6Q9GZR1 1112 aaPredicted RBP17.5■□□□□ 0.39
UBE3B-201ENST00000340074 ZMYND12Q9H0C1 365 aa17.5■□□□□ 0.39
UBE3B-201ENST00000340074 SPC25Q9HBM1 224 aa17.5■□□□□ 0.39
UBE3B-201ENST00000340074 VPS54Q9P1Q0 977 aa17.5■□□□□ 0.39
UBE3B-201ENST00000340074 LIMCH1Q9UPQ0 1083 aa17.5■□□□□ 0.39
UBE3B-201ENST00000340074 CTAGE5O15320 804 aa17.49■□□□□ 0.39
UBE3B-201ENST00000340074 DYNC1LI2O43237 492 aaPredicted RBP17.49■□□□□ 0.39
UBE3B-201ENST00000340074 TXNP10599 105 aaKnown RBP17.49■□□□□ 0.39
UBE3B-201ENST00000340074 MRPS9P82933 396 aaKnown RBP17.49■□□□□ 0.39
UBE3B-201ENST00000340074 TTLL4Q14679 1199 aa17.49■□□□□ 0.39
UBE3B-201ENST00000340074 CCDC62Q6P9F0 684 aa17.49■□□□□ 0.39
UBE3B-201ENST00000340074 GLT8D2Q9H1C3 349 aa17.49■□□□□ 0.39
UBE3B-201ENST00000340074 PCDHA6Q9UN73 950 aa17.49■□□□□ 0.39
UBE3B-201ENST00000340074 Q9Y3F1 56 aa17.49■□□□□ 0.39
UBE3B-201ENST00000340074 PCDHA8Q9Y5H6 950 aa17.49■□□□□ 0.39
UBE3B-201ENST00000340074 ESYT2A0FGR8 921 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 ADAMTS3O15072 1205 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 RGS20O76081 388 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 BEX3Q00994 111 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 KCNA10Q16322 511 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 GNASQ5JWF2 1037 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 TEX2Q8IWB9 1127 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 COPS5Q92905 334 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 FERMT2Q96AC1 680 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 PGBD1Q96JS3 809 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 AIFM3Q96NN9 605 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 HTATIP2Q9BUP3 242 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 AP5M1Q9H0R1 490 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 C6orf50Q9HD87 102 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 SH3GLB2Q9NR46 395 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 TMEM260Q9NX78 707 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 STK36Q9NRP7 1315 aa17.48■□□□□ 0.39
UBE3B-201ENST00000340074 CST5P28325 142 aaPredicted RBP17.47■□□□□ 0.39
UBE3B-201ENST00000340074 CLK2P49760 499 aaKnown RBP17.47■□□□□ 0.39
UBE3B-201ENST00000340074 NKX3-2P78367 333 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 ST3GAL1Q11201 340 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 LY6KQ17RY6 165 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 PCNX4Q63HM2 1172 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 CCSAPQ6IQ19 270 aaPredicted RBP17.47■□□□□ 0.39
UBE3B-201ENST00000340074 CCDC148Q8NFR7 591 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 TSEN34Q9BSV6 310 aaKnown RBP17.47■□□□□ 0.39
UBE3B-201ENST00000340074 RTEL1Q9NZ71 1219 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 PHF24Q9UPV7 400 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 MRVI1Q9Y6F6 885 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 NKRFO15226 690 aaKnown RBP eCLIP17.47■□□□□ 0.39
UBE3B-201ENST00000340074 STAM2O75886 525 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 GNA11P29992 359 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 FSCN1Q16658 493 aaKnown RBP17.47■□□□□ 0.39
UBE3B-201ENST00000340074 JAKMIP3Q5VZ66 844 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 PCSK9Q8NBP7 692 aaKnown RBP17.47■□□□□ 0.39
UBE3B-201ENST00000340074 OR6J1Q8NGC5 347 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 DPF3Q92784 378 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 ANO3Q9BYT9 981 aa17.47■□□□□ 0.39
UBE3B-201ENST00000340074 DDX41Q9UJV9 622 aaKnown RBP17.47■□□□□ 0.39
UBE3B-201ENST00000340074 A0A1W2PQ45 241 aaPredicted RBP17.46■□□□□ 0.39
UBE3B-201ENST00000340074 A0A1W2PQY0 241 aa17.46■□□□□ 0.39
UBE3B-201ENST00000340074 ST18O60284 1047 aa17.46■□□□□ 0.39
UBE3B-201ENST00000340074 FOSP01100 380 aaPredicted RBP17.46■□□□□ 0.39
UBE3B-201ENST00000340074 ASGR1P07306 291 aa17.46■□□□□ 0.39
UBE3B-201ENST00000340074 ACLYP53396 1101 aa17.46■□□□□ 0.39
UBE3B-201ENST00000340074 ATN1P54259 1190 aaPredicted RBP17.46■□□□□ 0.39
UBE3B-201ENST00000340074 NLRP5P59047 1200 aa17.46■□□□□ 0.39
UBE3B-201ENST00000340074 AP3B2Q13367 1082 aa17.46■□□□□ 0.39
UBE3B-201ENST00000340074 LRRC26Q2I0M4 334 aa17.46■□□□□ 0.39
UBE3B-201ENST00000340074 XRRA1Q6P2D8 792 aa17.46■□□□□ 0.39
UBE3B-201ENST00000340074 REXO1Q8N1G1 1221 aaKnown RBP17.46■□□□□ 0.39
UBE3B-201ENST00000340074 NSUN7Q8NE18 718 aaKnown RBP17.46■□□□□ 0.39
UBE3B-201ENST00000340074 EHMT1Q9H9B1 1298 aa17.46■□□□□ 0.39
UBE3B-201ENST00000340074 ORC3Q9UBD5 711 aaPredicted RBP17.46■□□□□ 0.39
UBE3B-201ENST00000340074 MOXD2PA6NHM9 499 aa17.45■□□□□ 0.38
UBE3B-201ENST00000340074 FDPSP14324 419 aaKnown RBP17.45■□□□□ 0.38
UBE3B-201ENST00000340074 GNPTABQ3T906 1256 aa17.45■□□□□ 0.38
UBE3B-201ENST00000340074 KCNV1Q6PIU1 500 aa17.45■□□□□ 0.38
UBE3B-201ENST00000340074 CCDC83Q8IWF9 413 aa17.45■□□□□ 0.38
UBE3B-201ENST00000340074 BICD2Q8TD16 824 aa17.45■□□□□ 0.38
UBE3B-201ENST00000340074 ZSCAN31Q96LW9 406 aaPredicted RBP17.45■□□□□ 0.38
UBE3B-201ENST00000340074 INPP4AQ96PE3 977 aaPredicted RBP17.45■□□□□ 0.38
UBE3B-201ENST00000340074 JAK2O60674 1132 aa17.44■□□□□ 0.38
UBE3B-201ENST00000340074 GH1P01241 217 aa17.44■□□□□ 0.38
UBE3B-201ENST00000340074 CPT1AP50416 773 aa17.44■□□□□ 0.38
UBE3B-201ENST00000340074 SP2Q02086 613 aa17.44■□□□□ 0.38
UBE3B-201ENST00000340074 ARHGAP1Q07960 439 aa17.44■□□□□ 0.38
UBE3B-201ENST00000340074 SLC39A5Q6ZMH5 540 aa17.44■□□□□ 0.38
UBE3B-201ENST00000340074 RASGRP4Q8TDF6 673 aa17.44■□□□□ 0.38
UBE3B-201ENST00000340074 SH2B1Q9NRF2 756 aaPredicted RBP17.44■□□□□ 0.38
UBE3B-201ENST00000340074 SPATA31C2B4DYI2 1134 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 ZEB2O60315 1214 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 EVI5O60447 810 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 SORBS3O60504 671 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 CD2BP2O95400 341 aaKnown RBP17.43■□□□□ 0.38
UBE3B-201ENST00000340074 TGFB3P10600 412 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 ITGB5P18084 799 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 ICAM3P32942 547 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 SREBF1P36956 1147 aa17.43■□□□□ 0.38
UBE3B-201ENST00000340074 SEMA3FQ13275 785 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms