RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 OLFML2BQ68BL8 750 aa20.33■□□□□ 0.84
SDCBP2-201ENST00000339987 NIPA1Q7RTP0 329 aa20.33■□□□□ 0.84
SDCBP2-201ENST00000339987 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.33■□□□□ 0.84
SDCBP2-201ENST00000339987 GABRQQ9UN88 632 aa20.33■□□□□ 0.84
SDCBP2-201ENST00000339987 UBIAD1Q9Y5Z9 338 aa20.33■□□□□ 0.84
SDCBP2-201ENST00000339987 CCNT1O60563 726 aaKnown RBP20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 EIF3JO75822 258 aaKnown RBP20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 MYCLP12524 364 aaPredicted RBP20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 ATP2B1P20020 1258 aa20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 CYP2B6P20813 491 aa20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 PRMT2P55345 433 aa20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 DNM1Q05193 864 aaKnown RBP20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 PRKCZQ05513 592 aa20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 PDE4DQ08499 809 aa20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 IRF5Q13568 498 aa20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 CEP55Q53EZ4 464 aa20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 TNPO1Q92973 898 aaKnown RBP20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 MXRA8Q9BRK3 442 aa20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 PCDHB6Q9Y5E3 794 aa20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 SYNGAP1Q96PV0 1343 aa20.32■□□□□ 0.84
SDCBP2-201ENST00000339987 TDP2O95551 362 aa20.31■□□□□ 0.84
SDCBP2-201ENST00000339987 BMP15O95972 392 aa20.31■□□□□ 0.84
SDCBP2-201ENST00000339987 IGHA2P01877 340 aa20.31■□□□□ 0.84
SDCBP2-201ENST00000339987 ZNF76P36508 570 aa20.31■□□□□ 0.84
SDCBP2-201ENST00000339987 NBR1Q14596 966 aa20.31■□□□□ 0.84
SDCBP2-201ENST00000339987 Q4G0T1 1027 aa20.31■□□□□ 0.84
SDCBP2-201ENST00000339987 ANO1Q5XXA6 986 aa20.31■□□□□ 0.84
SDCBP2-201ENST00000339987 ARMCX2Q7L311 632 aa20.31■□□□□ 0.84
SDCBP2-201ENST00000339987 TRMT44Q8IYL2 757 aaKnown RBP20.31■□□□□ 0.84
SDCBP2-201ENST00000339987 USP28Q96RU2 1077 aa20.31■□□□□ 0.84
SDCBP2-201ENST00000339987 TINF2Q9BSI4 451 aa20.31■□□□□ 0.84
SDCBP2-201ENST00000339987 POLR3EQ9NVU0 708 aa20.31■□□□□ 0.84
SDCBP2-201ENST00000339987 CFAP45Q9UL16 551 aa20.31■□□□□ 0.84
SDCBP2-201ENST00000339987 IGLV3-22A0A075B6J6 115 aa20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 FAM86B1E9PN63 330 aa20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 MEIS1O00470 390 aa20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 FAM86B2P0C5J1 330 aa20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 HSPA8P11142 646 aaKnown RBP20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 ITGB5P18084 799 aa20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 NASPP49321 788 aaPredicted RBP20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 KRT85P78386 507 aa20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 ZNF174Q15697 407 aa20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 FOXD4L6Q3SYB3 417 aaPredicted RBP20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 FOXD4L3Q6VB84 417 aaPredicted RBP20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 LENG9Q96B70 501 aa20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 INPP4AQ96PE3 977 aaPredicted RBP20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 JADE2Q9NQC1 790 aa20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 RTEL1Q9NZ71 1219 aa20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 DDX25Q9UHL0 483 aaKnown RBP20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 CEP131Q9UPN4 1083 aa20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 PCNTO95613 3336 aa20.3■□□□□ 0.84
SDCBP2-201ENST00000339987 FOXN1O15353 648 aa20.29■□□□□ 0.84
SDCBP2-201ENST00000339987 NEMFO60524 1076 aa20.29■□□□□ 0.84
SDCBP2-201ENST00000339987 HSPA1AP0DMV8 641 aaKnown RBP20.29■□□□□ 0.84
SDCBP2-201ENST00000339987 HSPA1BP0DMV9 641 aaKnown RBP20.29■□□□□ 0.84
SDCBP2-201ENST00000339987 MCM7P33993 719 aa20.29■□□□□ 0.84
SDCBP2-201ENST00000339987 SETQ01105 290 aaPredicted RBP20.29■□□□□ 0.84
SDCBP2-201ENST00000339987 SF3A1Q15459 793 aaKnown RBP20.29■□□□□ 0.84
SDCBP2-201ENST00000339987 NLRX1Q86UT6 975 aa20.29■□□□□ 0.84
SDCBP2-201ENST00000339987 GPRASP2Q96D09 838 aa20.29■□□□□ 0.84
SDCBP2-201ENST00000339987 FLRT1Q9NZU1 646 aa20.29■□□□□ 0.84
SDCBP2-201ENST00000339987 CLIC4Q9Y696 253 aa20.29■□□□□ 0.84
SDCBP2-201ENST00000339987 DDX49Q9Y6V7 483 aaKnown RBP20.29■□□□□ 0.84
SDCBP2-201ENST00000339987 MORC2Q9Y6X9 1032 aaPredicted RBP20.29■□□□□ 0.84
SDCBP2-201ENST00000339987 SLC37A4O43826 429 aa20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 YEATS4O95619 227 aa20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 CTCFP49711 727 aaPredicted RBP20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 GNPTABQ3T906 1256 aa20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 PRR16Q569H4 304 aa20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 CLEC17AQ6ZS10 378 aa20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 OTOP1Q7RTM1 612 aa20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 PLA2G4DQ86XP0 818 aa20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 CYP2W1Q8TAV3 490 aa20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 FTOQ9C0B1 505 aaKnown RBP eCLIP20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 VTA1Q9NP79 307 aa20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 TFIP11Q9UBB9 837 aaKnown RBP20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 MCM3APO60318 1980 aa20.28■□□□□ 0.84
SDCBP2-201ENST00000339987 LAD1O00515 517 aa20.27■□□□□ 0.84
SDCBP2-201ENST00000339987 TBX3O15119 743 aa20.27■□□□□ 0.84
SDCBP2-201ENST00000339987 MAFGO15525 162 aa20.27■□□□□ 0.84
SDCBP2-201ENST00000339987 RGS20O76081 388 aa20.27■□□□□ 0.84
SDCBP2-201ENST00000339987 SNAI1O95863 264 aaPredicted RBP20.27■□□□□ 0.84
SDCBP2-201ENST00000339987 ICAM3P32942 547 aa20.27■□□□□ 0.84
SDCBP2-201ENST00000339987 PTPAQ15257 358 aa20.27■□□□□ 0.84
SDCBP2-201ENST00000339987 CCL14Q16627 93 aa20.27■□□□□ 0.84
SDCBP2-201ENST00000339987 C4orf32Q8N8J7 132 aa20.27■□□□□ 0.84
SDCBP2-201ENST00000339987 ZFP91Q96JP5 570 aaPredicted RBP20.27■□□□□ 0.84
SDCBP2-201ENST00000339987 CDHR1Q96JP9 859 aa20.27■□□□□ 0.84
SDCBP2-201ENST00000339987 CAPN15O75808 1086 aa20.27■□□□□ 0.83
SDCBP2-201ENST00000339987 ATP2C1P98194 919 aaPredicted RBP20.27■□□□□ 0.83
SDCBP2-201ENST00000339987 PTGDRQ13258 359 aa20.27■□□□□ 0.83
SDCBP2-201ENST00000339987 MTMR1Q13613 665 aa20.27■□□□□ 0.83
SDCBP2-201ENST00000339987 SLC39A14Q15043 492 aa20.27■□□□□ 0.83
SDCBP2-201ENST00000339987 POTEDQ86YR6 584 aa20.27■□□□□ 0.83
SDCBP2-201ENST00000339987 LINC00301Q8NCQ3 95 aa20.27■□□□□ 0.83
SDCBP2-201ENST00000339987 CHAMP1Q96JM3 812 aa20.27■□□□□ 0.83
SDCBP2-201ENST00000339987 SCAND2PQ9GZW5 306 aaPredicted RBP20.27■□□□□ 0.83
SDCBP2-201ENST00000339987 KATNBL1Q9H079 304 aa20.27■□□□□ 0.83
SDCBP2-201ENST00000339987 KCNMB3Q9NPA1 279 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms