RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 KANK3Q6NY19 840 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 DNAJC9Q8WXX5 260 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 NR1H4Q96RI1 486 aaPredicted RBP10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 IWS1Q96ST2 819 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 HSFX1Q9UBD0 423 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 SCOCQ9UIL1 159 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 SNX12Q9UMY4 172 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 HPSEQ9Y251 543 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 USP20Q9Y2K6 914 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 MYH13Q9UKX3 1938 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 SYNRGQ9UMZ2 1314 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 IFIT3O14879 490 aaKnown RBP10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 OXCT1P55809 520 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 NEXNQ0ZGT2 675 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 TMEM53Q6P2H8 277 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 CCDC80Q76M96 950 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 RETREG2Q8NC44 543 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 SMC1BQ8NDV3 1235 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 NELFBQ8WX92 580 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 KRT12Q99456 494 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 TMCO1Q9UM00 188 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 DAAM1Q9Y4D1 1078 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 MYO3AQ8NEV4 1616 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 PPLO60437 1756 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 CD163L1Q9NR16 1453 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 POLR2DO15514 142 aaKnown RBP10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 MMEP08473 750 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 FLT3P36888 993 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 AFMP43652 599 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 USP11P51784 963 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 DPYDQ12882 1025 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 EMC10Q5UCC4 262 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 ZNF365Q70YC5 407 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 STAMQ92783 540 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 EVI5LQ96CN4 794 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 VCXQ9H320 206 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 LRWD1Q9UFC0 647 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 EFR3BQ9Y2G0 817 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 LRRC42Q9Y546 428 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 A0A0J9YVX5 310 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 TTC26A0AVF1 554 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 A6NJR5 290 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 TAF5LO75529 589 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 GSTA1P08263 222 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 VCAM1P19320 739 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 PTDSS1P48651 473 aaKnown RBP10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 GALK1P51570 392 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 RRS1Q15050 365 aaKnown RBP10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 KSR1Q8IVT5 923 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 KLHL7Q8IXQ5 586 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 FAM133AQ8N9E0 248 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 UHMK1Q8TAS1 419 aaKnown RBP10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 UTP4Q969X6 686 aaKnown RBP10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 EEF2KMTQ96G04 330 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 DYDC2Q96IM9 177 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 PFDN4Q9NQP4 134 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 SPO11Q9Y5K1 396 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 SALL1Q9NSC2 1324 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 QRICH2Q9H0J4 1663 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 A2ML1A8K2U0 1454 aa10.57□□□□□ -0.72
PTCHD4-201ENST00000339488 USP32Q8NFA0 1604 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 ATP9AO75110 1047 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 CHN1P15882 459 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 KRT31Q15323 416 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 KRT71Q3SY84 523 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 RIC3Q7Z5B4 369 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 P3H4Q92791 437 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 HIC2Q96JB3 615 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 TMEM237Q96Q45 408 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 CTNND2Q9UQB3 1225 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 WDR37Q9Y2I8 494 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 CEP104O60308 925 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 PEX11AO75192 247 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 PENKP01210 267 aaPredicted RBP10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 PLCD1P51178 756 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 DIXDC1Q155Q3 683 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 PTPROQ16827 1216 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 USP49Q70CQ1 688 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 IFT20Q8IY31 132 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 CLASRPQ8N2M8 674 aaKnown RBP10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 TMCO5AQ8N6Q1 288 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 FERMT2Q96AC1 680 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 ABHD8Q96I13 439 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 AGAP3Q96P47 875 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 TRAPPC9Q96Q05 1148 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 SAMD15Q9P1V8 674 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 RABL2BQ9UNT1 228 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 DLG5Q8TDM6 1919 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 NEXMIFQ5QGS0 1516 aa10.56□□□□□ -0.72
PTCHD4-201ENST00000339488 SPDYE16A6NNV3 312 aaPredicted RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 IPO5O00410 1097 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 CHL1O00533 1208 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 FOXO3O43524 673 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 KRT86O43790 486 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 TPBGLP0DKB5 382 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 PDIA3P30101 505 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 ERFP50548 548 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 PSMD7P51665 324 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 MORC3Q14149 939 aa10.55□□□□□ -0.72
PTCHD4-201ENST00000339488 SLC39A14Q15043 492 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms