RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 KCTD1Q719H9 257 aa14.99□□□□□ -0.01
RTN4-202ENST00000337526 BBOF1Q8ND07 529 aa14.99□□□□□ -0.01
RTN4-202ENST00000337526 POMGNT1Q8WZA1 660 aa14.99□□□□□ -0.01
RTN4-202ENST00000337526 PCDHA13Q9Y5I0 950 aa14.99□□□□□ -0.01
RTN4-202ENST00000337526 IVNS1ABPQ9Y6Y0 642 aa14.99□□□□□ -0.01
RTN4-202ENST00000337526 LRRN2O75325 713 aa14.99□□□□□ -0.01
RTN4-202ENST00000337526 BFSP1Q12934 665 aa14.99□□□□□ -0.01
RTN4-202ENST00000337526 SPICE1Q8N0Z3 855 aa14.99□□□□□ -0.01
RTN4-202ENST00000337526 CPSF2Q9P2I0 782 aaKnown RBP14.99□□□□□ -0.01
RTN4-202ENST00000337526 SUN1O94901 812 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 CASP1P29466 404 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 SLC8A1P32418 973 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 MAN1A1P33908 653 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 DHX9Q08211 1270 aaKnown RBP14.98□□□□□ -0.01
RTN4-202ENST00000337526 NNTQ13423 1086 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 TBC1D10CQ8IV04 446 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 CCDC197Q8NCU1 140 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 NT5C1BQ96P26 610 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 DDX23Q9BUQ8 820 aaKnown RBP14.98□□□□□ -0.01
RTN4-202ENST00000337526 H0YCG3 227 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 P4HA1P13674 534 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 DMP1Q13316 513 aaPredicted RBP14.98□□□□□ -0.01
RTN4-202ENST00000337526 LLGL1Q15334 1064 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 SCYL2Q6P3W7 929 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 EFCAB13Q8IY85 973 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 ZNF579Q8NAF0 562 aaKnown RBP14.98□□□□□ -0.01
RTN4-202ENST00000337526 PROCA1Q8NCQ7 364 aaPredicted RBP14.98□□□□□ -0.01
RTN4-202ENST00000337526 RAB3IPQ96QF0 476 aaPredicted RBP14.98□□□□□ -0.01
RTN4-202ENST00000337526 ADAM21Q9UKJ8 722 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 CRCPO75575 148 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 CA8P35219 290 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 SLC7A5Q01650 507 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 TMEM94Q12767 1356 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 TAF12Q16514 161 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 TOGARAM2Q6ZUX3 1019 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 PREX2Q70Z35 1606 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 DGKHQ86XP1 1220 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 A0A087WUV0 522 aaPredicted RBP14.98□□□□□ -0.01
RTN4-202ENST00000337526 CTNND1O60716 968 aaKnown RBP14.98□□□□□ -0.01
RTN4-202ENST00000337526 POLR2BP30876 1174 aaKnown RBP14.98□□□□□ -0.01
RTN4-202ENST00000337526 BPIFB4P59827 614 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 ERFEQ4G0M1 354 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 KAZNQ674X7 775 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 STK32BQ9NY57 414 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 TTLL3Q9Y4R7 772 aa14.98□□□□□ -0.01
RTN4-202ENST00000337526 USP17L3A6NCW0 530 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 USP17L4A6NCW7 530 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 TCP10L2B9ZVM9 353 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 GIPC1O14908 333 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 GAP43P17677 238 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 MFAP3P55082 362 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 HNRNPH2P55795 449 aaKnown RBP14.97□□□□□ -0.01
RTN4-202ENST00000337526 PSMD2Q13200 908 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 DIXDC1Q155Q3 683 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 SEPT14Q6ZU15 432 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 USP17L1Q7RTZ2 530 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 MCF2L2Q86YR7 1114 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 hCG_1984214I3L0E3 225 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 SNAP23O00161 211 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 HNRNPDLO14979 420 aaKnown RBP14.97□□□□□ -0.01
RTN4-202ENST00000337526 SERPING1P05155 500 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 LRRC63Q05C16 580 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 CUL4BQ13620 913 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 BRDTQ58F21 947 aaPredicted RBP14.97□□□□□ -0.01
RTN4-202ENST00000337526 PHLDB3Q6NSJ2 640 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 ZNF713Q8N859 430 aaPredicted RBP14.97□□□□□ -0.01
RTN4-202ENST00000337526 BPIFA3Q9BQP9 254 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 MEIS1O00470 390 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 CYP27B1O15528 508 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 RNF8O76064 485 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 GFPT2O94808 682 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 CCDC125Q86Z20 511 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 NIM1KQ8IY84 436 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 AFAP1L2Q8N4X5 818 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 TAB3Q8N5C8 712 aaPredicted RBP14.97□□□□□ -0.01
RTN4-202ENST00000337526 KIF1BO60333 1816 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 USP27XA6NNY8 438 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 POC1B-GALNT4F8VUJ3 575 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 SARNPP82979 210 aaKnown RBP14.97□□□□□ -0.01
RTN4-202ENST00000337526 MUM1Q2TAK8 710 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 PIGBQ92521 554 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 PBKQ96KB5 322 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 KANSL2Q9H9L4 492 aa14.97□□□□□ -0.01
RTN4-202ENST00000337526 LRRIQ4A6NIV6 560 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 YARSP54577 528 aaKnown RBP14.96□□□□□ -0.01
RTN4-202ENST00000337526 GYS2P54840 703 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 UBXN2AP68543 259 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 MECOMQ03112 1051 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 ALS2CLQ60I27 953 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 ALKBH5Q6P6C2 394 aaKnown RBP14.96□□□□□ -0.01
RTN4-202ENST00000337526 TMTC3Q6ZXV5 915 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 ZBTB8OSQ8IWT0 167 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 LRRC8CQ8TDW0 803 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 STAG1Q8WVM7 1258 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 ZNF653Q96CK0 615 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 CFAP57Q96MR6 1250 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 SUGCTQ9HAC7 445 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 CYB5R4Q7L1T6 521 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 GCNT4Q9P109 453 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 CCPG1Q9ULG6 757 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms