RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 SMARCA1P28370 1054 aa22.09■■□□□ 1.13
CDCA4-201ENST00000336219 POTEDQ86YR6 584 aa22.09■■□□□ 1.13
CDCA4-201ENST00000336219 ARL8AQ96BM9 186 aa22.09■■□□□ 1.13
CDCA4-201ENST00000336219 SALL4Q9UJQ4 1053 aa22.09■■□□□ 1.13
CDCA4-201ENST00000336219 CDK17Q00537 523 aa22.09■■□□□ 1.13
CDCA4-201ENST00000336219 ORC2Q13416 577 aaPredicted RBP22.09■■□□□ 1.13
CDCA4-201ENST00000336219 C15orf52Q6ZUT6 534 aaKnown RBP22.09■■□□□ 1.13
CDCA4-201ENST00000336219 CALML4Q96GE6 196 aa22.09■■□□□ 1.13
CDCA4-201ENST00000336219 PIGSQ96S52 555 aa22.09■■□□□ 1.13
CDCA4-201ENST00000336219 SEMA6BQ9H3T3 888 aa22.09■■□□□ 1.13
CDCA4-201ENST00000336219 SH2D4AQ9H788 454 aa22.09■■□□□ 1.13
CDCA4-201ENST00000336219 JRKLQ9Y4A0 524 aa22.09■■□□□ 1.13
CDCA4-201ENST00000336219 MYH10P35580 1976 aa22.09■■□□□ 1.13
CDCA4-201ENST00000336219 ICE2Q659A1 982 aa22.08■■□□□ 1.13
CDCA4-201ENST00000336219 REXO1Q8N1G1 1221 aaKnown RBP22.08■■□□□ 1.13
CDCA4-201ENST00000336219 MMGT1Q8N4V1 131 aa22.08■■□□□ 1.13
CDCA4-201ENST00000336219 CEP95Q96GE4 821 aa22.08■■□□□ 1.13
CDCA4-201ENST00000336219 OSBPL9Q96SU4 736 aa22.08■■□□□ 1.13
CDCA4-201ENST00000336219 VAT1LQ9HCJ6 419 aa22.08■■□□□ 1.13
CDCA4-201ENST00000336219 SLC39A2Q9NP94 309 aa22.08■■□□□ 1.13
CDCA4-201ENST00000336219 BIN2Q9UBW5 565 aaPredicted RBP22.08■■□□□ 1.13
CDCA4-201ENST00000336219 GRIN2DO15399 1336 aa22.08■■□□□ 1.13
CDCA4-201ENST00000336219 GPR75-ASB3A0A0A6YYF3 556 aa22.08■■□□□ 1.12
CDCA4-201ENST00000336219 EIF4A3P38919 411 aaKnown RBP22.08■■□□□ 1.12
CDCA4-201ENST00000336219 LIG3P49916 1009 aa22.08■■□□□ 1.12
CDCA4-201ENST00000336219 GNGT1P63211 74 aa22.08■■□□□ 1.12
CDCA4-201ENST00000336219 CENPPQ6IPU0 288 aa22.08■■□□□ 1.12
CDCA4-201ENST00000336219 TADA2BQ86TJ2 420 aa22.08■■□□□ 1.12
CDCA4-201ENST00000336219 TEX11Q8IYF3 940 aa22.08■■□□□ 1.12
CDCA4-201ENST00000336219 CAPS2Q9BXY5 557 aa22.08■■□□□ 1.12
CDCA4-201ENST00000336219 ESYT2A0FGR8 921 aa22.07■■□□□ 1.12
CDCA4-201ENST00000336219 TACC1O75410 805 aa22.07■■□□□ 1.12
CDCA4-201ENST00000336219 KIF11P52732 1056 aa22.07■■□□□ 1.12
CDCA4-201ENST00000336219 EFCAB13Q8IY85 973 aa22.07■■□□□ 1.12
CDCA4-201ENST00000336219 FNBP4Q8N3X1 1017 aaPredicted RBP22.07■■□□□ 1.12
CDCA4-201ENST00000336219 TRIM58Q8NG06 486 aa22.07■■□□□ 1.12
CDCA4-201ENST00000336219 BCAS4Q8TDM0 211 aa22.07■■□□□ 1.12
CDCA4-201ENST00000336219 SAMM50Q9Y512 469 aa22.07■■□□□ 1.12
CDCA4-201ENST00000336219 GRB10Q13322 594 aa22.07■■□□□ 1.12
CDCA4-201ENST00000336219 TTMPQ5BVD1 217 aa22.07■■□□□ 1.12
CDCA4-201ENST00000336219 IQCEQ6IPM2 695 aa22.07■■□□□ 1.12
CDCA4-201ENST00000336219 MS4A14Q96JA4 679 aa22.07■■□□□ 1.12
CDCA4-201ENST00000336219 BLOC1S4Q9NUP1 217 aa22.07■■□□□ 1.12
CDCA4-201ENST00000336219 CCNL1Q9UK58 526 aaPredicted RBP22.07■■□□□ 1.12
CDCA4-201ENST00000336219 TXKP42681 527 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 GTF2A1P52655 376 aaPredicted RBP22.06■■□□□ 1.12
CDCA4-201ENST00000336219 HAUS3Q68CZ6 603 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 CCDC70Q6NSX1 233 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 SV2BQ7L1I2 683 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 MTMR9Q96QG7 549 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 TMEM260Q9NX78 707 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 TAF1LQ8IZX4 1826 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 BUB1O43683 1085 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 NOVP48745 357 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 DNA2P51530 1060 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 PPFIA1Q13136 1202 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 TMC4Q7Z404 712 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 SH2D3CQ8N5H7 860 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 IQCDQ96DY2 449 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 TSGA10Q9BZW7 698 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 DEF6Q9H4E7 631 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 MMRN2Q9H8L6 949 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 CD209Q9NNX6 404 aa22.06■■□□□ 1.12
CDCA4-201ENST00000336219 USO1O60763 962 aaKnown RBP22.05■■□□□ 1.12
CDCA4-201ENST00000336219 CCDC155Q8N6L0 562 aa22.05■■□□□ 1.12
CDCA4-201ENST00000336219 KAT2BQ92831 832 aa22.05■■□□□ 1.12
CDCA4-201ENST00000336219 UBA5Q9GZZ9 404 aa22.05■■□□□ 1.12
CDCA4-201ENST00000336219 RIOX1Q9H6W3 641 aa22.05■■□□□ 1.12
CDCA4-201ENST00000336219 STK17AQ9UEE5 414 aa22.05■■□□□ 1.12
CDCA4-201ENST00000336219 FAM169AQ9Y6X4 670 aa22.05■■□□□ 1.12
CDCA4-201ENST00000336219 MYMKA6NI61 221 aa22.05■■□□□ 1.12
CDCA4-201ENST00000336219 USP17L5A8MUK1 530 aa22.05■■□□□ 1.12
CDCA4-201ENST00000336219 HNRNPH3P31942 346 aaKnown RBP22.05■■□□□ 1.12
CDCA4-201ENST00000336219 KCTD16Q68DU8 428 aa22.05■■□□□ 1.12
CDCA4-201ENST00000336219 UNC13DQ70J99 1090 aa22.05■■□□□ 1.12
CDCA4-201ENST00000336219 PNMA5Q96PV4 448 aa22.05■■□□□ 1.12
CDCA4-201ENST00000336219 RBM12Q9NTZ6 932 aaKnown RBP22.05■■□□□ 1.12
CDCA4-201ENST00000336219 PLAGL2Q9UPG8 496 aa22.05■■□□□ 1.12
CDCA4-201ENST00000336219 LRRC53A6NM62 1247 aa22.04■■□□□ 1.12
CDCA4-201ENST00000336219 PLCG2P16885 1265 aa22.04■■□□□ 1.12
CDCA4-201ENST00000336219 FXR2P51116 673 aaKnown RBP eCLIP22.04■■□□□ 1.12
CDCA4-201ENST00000336219 GPSM2P81274 684 aa22.04■■□□□ 1.12
CDCA4-201ENST00000336219 CALCRLQ16602 461 aa22.04■■□□□ 1.12
CDCA4-201ENST00000336219 VWA3BQ502W6 1294 aa22.04■■□□□ 1.12
CDCA4-201ENST00000336219 RRAGAQ7L523 313 aa22.04■■□□□ 1.12
CDCA4-201ENST00000336219 SIK3Q9Y2K2 1263 aa22.04■■□□□ 1.12
CDCA4-201ENST00000336219 A0A087WUV0 522 aaPredicted RBP22.04■■□□□ 1.12
CDCA4-201ENST00000336219 ZSCAN5CA6NGD5 496 aaPredicted RBP22.04■■□□□ 1.12
CDCA4-201ENST00000336219 EIF3HO15372 352 aaKnown RBP eCLIP22.04■■□□□ 1.12
CDCA4-201ENST00000336219 AKR1B10O60218 316 aa22.04■■□□□ 1.12
CDCA4-201ENST00000336219 RHBDL3P58872 404 aa22.04■■□□□ 1.12
CDCA4-201ENST00000336219 GFPT1Q06210 699 aaPredicted RBP22.04■■□□□ 1.12
CDCA4-201ENST00000336219 CCDC181Q5TID7 509 aa22.04■■□□□ 1.12
CDCA4-201ENST00000336219 SH3GL2Q99962 352 aa22.04■■□□□ 1.12
CDCA4-201ENST00000336219 NHSQ6T4R5 1651 aa22.03■■□□□ 1.12
CDCA4-201ENST00000336219 PVALEFA0A1B0GWK0 134 aa22.03■■□□□ 1.12
CDCA4-201ENST00000336219 hCG_1984214I3L0E3 225 aa22.03■■□□□ 1.12
CDCA4-201ENST00000336219 PDCLQ13371 301 aa22.03■■□□□ 1.12
CDCA4-201ENST00000336219 ZNF713Q8N859 430 aaPredicted RBP22.03■■□□□ 1.12
CDCA4-201ENST00000336219 CNBD1Q8NA66 436 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms