RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 RBM28Q9NW13 759 aaKnown RBP17.22■□□□□ 0.35
KATNA1-201ENST00000335643 NAP1L2Q9ULW6 460 aaPredicted RBP17.22■□□□□ 0.35
KATNA1-201ENST00000335643 MYH7BA7E2Y1 1941 aa17.22■□□□□ 0.35
KATNA1-201ENST00000335643 DOCK5Q9H7D0 1870 aa17.21■□□□□ 0.35
KATNA1-201ENST00000335643 A0A0U1RQG5 324 aaPredicted RBP17.21■□□□□ 0.35
KATNA1-201ENST00000335643 ARVCFO00192 962 aa17.21■□□□□ 0.35
KATNA1-201ENST00000335643 CLTBP09497 229 aa17.21■□□□□ 0.35
KATNA1-201ENST00000335643 BMP8BP34820 402 aa17.21■□□□□ 0.35
KATNA1-201ENST00000335643 MRPS9P82933 396 aaKnown RBP17.21■□□□□ 0.35
KATNA1-201ENST00000335643 FGD1P98174 961 aa17.21■□□□□ 0.35
KATNA1-201ENST00000335643 TOB2Q14106 344 aaPredicted RBP17.21■□□□□ 0.35
KATNA1-201ENST00000335643 RUFY3Q7L099 469 aa17.21■□□□□ 0.35
KATNA1-201ENST00000335643 VTI1AQ96AJ9 217 aa17.21■□□□□ 0.35
KATNA1-201ENST00000335643 UPF3BQ9BZI7 483 aaKnown RBP17.21■□□□□ 0.35
KATNA1-201ENST00000335643 DDX41Q9UJV9 622 aaKnown RBP17.21■□□□□ 0.35
KATNA1-201ENST00000335643 NID2Q14112 1375 aa17.2■□□□□ 0.34
KATNA1-201ENST00000335643 SCN10AQ9Y5Y9 1956 aa17.2■□□□□ 0.34
KATNA1-201ENST00000335643 A6NJR5 290 aa17.2■□□□□ 0.34
KATNA1-201ENST00000335643 PIK3CDO00329 1044 aa17.2■□□□□ 0.34
KATNA1-201ENST00000335643 PSMA5P28066 241 aa17.2■□□□□ 0.34
KATNA1-201ENST00000335643 METAP2P50579 478 aaKnown RBP eCLIP17.2■□□□□ 0.34
KATNA1-201ENST00000335643 PURAQ00577 322 aaKnown RBP17.2■□□□□ 0.34
KATNA1-201ENST00000335643 SP2Q02086 613 aa17.2■□□□□ 0.34
KATNA1-201ENST00000335643 ARHGAP1Q07960 439 aa17.2■□□□□ 0.34
KATNA1-201ENST00000335643 UBE2SQ16763 222 aa17.2■□□□□ 0.34
KATNA1-201ENST00000335643 HEATR3Q7Z4Q2 680 aa17.2■□□□□ 0.34
KATNA1-201ENST00000335643 FAM126BQ8IXS8 530 aa17.2■□□□□ 0.34
KATNA1-201ENST00000335643 SLC43A3Q8NBI5 491 aa17.2■□□□□ 0.34
KATNA1-201ENST00000335643 BADQ92934 168 aa17.2■□□□□ 0.34
KATNA1-201ENST00000335643 TOX2Q96NM4 488 aa17.2■□□□□ 0.34
KATNA1-201ENST00000335643 LARP6Q9BRS8 491 aaKnown RBP17.2■□□□□ 0.34
KATNA1-201ENST00000335643 V9GY48 417 aaPredicted RBP17.2■□□□□ 0.34
KATNA1-201ENST00000335643 NKRFO15226 690 aaKnown RBP eCLIP17.19■□□□□ 0.34
KATNA1-201ENST00000335643 SORBS3O60504 671 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 PPFIA3O75145 1194 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 SEC24BO95487 1268 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 RCAN1P53805 252 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 ITGA7Q13683 1181 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 BCAS3Q9H6U6 928 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 SOX1O00570 391 aaPredicted RBP17.19■□□□□ 0.34
KATNA1-201ENST00000335643 MYL3P08590 195 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 CPT1AP50416 773 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 SMARCC2Q8TAQ2 1214 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 AFG1LQ8WV93 481 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 UBE2OQ9C0C9 1292 aaKnown RBP17.19■□□□□ 0.34
KATNA1-201ENST00000335643 PSTPIP2Q9H939 334 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 PRKAG2Q9UGJ0 569 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 TBX21Q9UL17 535 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 MRVI1Q9Y6F6 885 aa17.19■□□□□ 0.34
KATNA1-201ENST00000335643 KIAA0355O15063 1070 aa17.18■□□□□ 0.34
KATNA1-201ENST00000335643 ADAMTS3O15072 1205 aa17.18■□□□□ 0.34
KATNA1-201ENST00000335643 ZEB2O60315 1214 aa17.18■□□□□ 0.34
KATNA1-201ENST00000335643 CABYRO75952 493 aa17.18■□□□□ 0.34
KATNA1-201ENST00000335643 CD4P01730 458 aa17.18■□□□□ 0.34
KATNA1-201ENST00000335643 CCND2P30279 289 aa17.18■□□□□ 0.34
KATNA1-201ENST00000335643 EVCP57679 992 aa17.18■□□□□ 0.34
KATNA1-201ENST00000335643 SEMA3FQ13275 785 aa17.18■□□□□ 0.34
KATNA1-201ENST00000335643 NCOA5Q9HCD5 579 aaKnown RBP17.18■□□□□ 0.34
KATNA1-201ENST00000335643 TMEM39AQ9NV64 488 aa17.18■□□□□ 0.34
KATNA1-201ENST00000335643 RTEL1Q9NZ71 1219 aa17.18■□□□□ 0.34
KATNA1-201ENST00000335643 STXBP3O00186 592 aa17.17■□□□□ 0.34
KATNA1-201ENST00000335643 GH1P01241 217 aa17.17■□□□□ 0.34
KATNA1-201ENST00000335643 MMP3P08254 477 aa17.17■□□□□ 0.34
KATNA1-201ENST00000335643 PDIA3P30101 505 aaKnown RBP17.17■□□□□ 0.34
KATNA1-201ENST00000335643 NTRK3Q16288 839 aa17.17■□□□□ 0.34
KATNA1-201ENST00000335643 PHKBQ93100 1093 aa17.17■□□□□ 0.34
KATNA1-201ENST00000335643 TM6SF1Q9BZW5 370 aa17.17■□□□□ 0.34
KATNA1-201ENST00000335643 TRPV6Q9H1D0 765 aa17.17■□□□□ 0.34
KATNA1-201ENST00000335643 CYP46A1Q9Y6A2 500 aa17.17■□□□□ 0.34
KATNA1-201ENST00000335643 COL6A3P12111 3177 aa17.16■□□□□ 0.34
KATNA1-201ENST00000335643 DCDC2CA8MYV0 355 aa17.16■□□□□ 0.34
KATNA1-201ENST00000335643 B4GALT4O60513 344 aa17.16■□□□□ 0.34
KATNA1-201ENST00000335643 UBA1P22314 1058 aaKnown RBP17.16■□□□□ 0.34
KATNA1-201ENST00000335643 EPHB4P54760 987 aa17.16■□□□□ 0.34
KATNA1-201ENST00000335643 CCT2P78371 535 aaKnown RBP17.16■□□□□ 0.34
KATNA1-201ENST00000335643 PKN1Q16512 942 aa17.16■□□□□ 0.34
KATNA1-201ENST00000335643 TDHQ8IZJ6 230 aa17.16■□□□□ 0.34
KATNA1-201ENST00000335643 CUL5Q93034 780 aa17.16■□□□□ 0.34
KATNA1-201ENST00000335643 INPP4AQ96PE3 977 aaPredicted RBP17.16■□□□□ 0.34
KATNA1-201ENST00000335643 LBHD1Q9BQE6 289 aaPredicted RBP17.16■□□□□ 0.34
KATNA1-201ENST00000335643 POLR3EQ9NVU0 708 aa17.16■□□□□ 0.34
KATNA1-201ENST00000335643 TELO2Q9Y4R8 837 aa17.16■□□□□ 0.34
KATNA1-201ENST00000335643 EYSQ5T1H1 3165 aa17.16■□□□□ 0.34
KATNA1-201ENST00000335643 MROH7Q68CQ1 1323 aa17.16■□□□□ 0.34
KATNA1-201ENST00000335643 A0A1W2PPC1 479 aa17.15■□□□□ 0.34
KATNA1-201ENST00000335643 NAPAP54920 295 aa17.15■□□□□ 0.34
KATNA1-201ENST00000335643 PCNX4Q63HM2 1172 aa17.15■□□□□ 0.34
KATNA1-201ENST00000335643 KAT2BQ92831 832 aa17.15■□□□□ 0.34
KATNA1-201ENST00000335643 EMID1Q96A84 441 aaPredicted RBP17.15■□□□□ 0.34
KATNA1-201ENST00000335643 PGBD1Q96JS3 809 aa17.15■□□□□ 0.34
KATNA1-201ENST00000335643 MTG1Q9BT17 334 aaPredicted RBP17.15■□□□□ 0.34
KATNA1-201ENST00000335643 BARHL2Q9NY43 387 aa17.15■□□□□ 0.34
KATNA1-201ENST00000335643 UMODL1Q5DID0 1318 aa17.15■□□□□ 0.34
KATNA1-201ENST00000335643 GGPS1O95749 300 aa17.15■□□□□ 0.34
KATNA1-201ENST00000335643 PFKFB3Q16875 520 aaPredicted RBP17.15■□□□□ 0.34
KATNA1-201ENST00000335643 NBPF20Q3BBV1 942 aa17.15■□□□□ 0.34
KATNA1-201ENST00000335643 HSDL1Q3SXM5 330 aa17.15■□□□□ 0.34
KATNA1-201ENST00000335643 C9orf50Q5SZB4 431 aa17.15■□□□□ 0.34
KATNA1-201ENST00000335643 MYSM1Q5VVJ2 828 aa17.15■□□□□ 0.34
KATNA1-201ENST00000335643 LRCH3Q96II8 777 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms