RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PYGBP11216 843 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 NPR1P16066 1061 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 MAPK4P31152 587 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 TRIM59Q8IWR1 403 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 ATP6V1E2Q96A05 226 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 ATG3Q9NT62 314 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 ZNF532Q9HCE3 1301 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 SERPINI2O75830 405 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 ACSL3O95573 720 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 ITGA6P23229 1130 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 ARHGDIAP52565 204 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 MDM2Q00987 491 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-201ENST00000334504 EMBQ6PCB8 327 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 FAM186BQ8IYM0 893 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 NYXQ9GZU5 481 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 SH2D4AQ9H788 454 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 SUPT3HO75486 399 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 AP2B1P63010 937 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 CUL1Q13616 776 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 KMT5BQ4FZB7 885 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 ZNF654Q8IZM8 581 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 NFATC2IPQ8NCF5 419 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 SKA2Q8WVK7 121 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-201ENST00000334504 RMDN2Q96LZ7 410 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 METTL14Q9HCE5 456 aaKnown RBP10.61□□□□□ -0.71
COL4A6-201ENST00000334504 GPHNQ9NQX3 736 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-201ENST00000334504 ZNF229Q9UJW7 825 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 MAN1B1Q9UKM7 699 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 NSFL1CQ9UNZ2 370 aaKnown RBP10.61□□□□□ -0.71
COL4A6-201ENST00000334504 SNX5Q9Y5X3 404 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 A0A1W2PQ27 194 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 A0A1W2PQ64 194 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 A0A1W2PQD8 194 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 E9PMD0 336 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 MCF2LO15068 1137 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 ACTN1P12814 892 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 C4orf50Q6ZRC1 276 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL4A6-201ENST00000334504 DEPDC1BQ8WUY9 529 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 ZNF653Q96CK0 615 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 PIK3C2GO75747 1445 aa10.61□□□□□ -0.71
COL4A6-201ENST00000334504 GMNCA6NCL1 334 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 MYO1FO00160 1098 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 CAPN9O14815 690 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 PFDN6O15212 129 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 GJC2Q5T442 439 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 FAM47EQ6ZV65 393 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 MYLK4Q86YV6 388 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 ING2Q9H160 280 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 RTEL1Q9NZ71 1219 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 SYNJ2BP-COX16A0A087WUM0 186 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 GTPBP10A4D1E9 387 aaKnown RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 NOP56O00567 594 aaKnown RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 WBP4O75554 376 aaKnown RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 OR52Z1P0C646 297 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 DLATP10515 647 aaKnown RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 HSPA8P11142 646 aaKnown RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 EIF4A3P38919 411 aaKnown RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 SPOPLQ6IQ16 392 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 CRLF3Q8IUI8 442 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 COX16Q9P0S2 106 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 TSC22D4Q9Y3Q8 395 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 A6NJR5 290 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 OATP04181 439 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 DYNLT1P63172 113 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 BASP1P80723 227 aaKnown RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 IQCB1Q15051 598 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 FAM133AQ8N9E0 248 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 DDX17Q92841 729 aaKnown RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 TRIM55Q9BYV6 548 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 AZI2Q9H6S1 392 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 ARHGEF10LQ9HCE6 1279 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 SUCLA2Q9P2R7 463 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 MORC2Q9Y6X9 1032 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 TMEM232C9JQI7 657 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 NDUFA10O95299 355 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 CFBP00751 764 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 KRT1P04264 644 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 ZAP70P43403 619 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 TSTA3Q13630 321 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 SPARCL1Q14515 664 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 GSDMAQ96QA5 445 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 ZCCHC17Q9NP64 241 aaKnown RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 ARID5BQ14865 1188 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 RNF169Q8NCN4 708 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 ICA1LQ8NDH6 482 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 SUCLG2Q96I99 432 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 ZC3H12CQ9C0D7 883 aaKnown RBP10.6□□□□□ -0.71
COL4A6-201ENST00000334504 LMTK3Q96Q04 1460 aa10.6□□□□□ -0.71
COL4A6-201ENST00000334504 DAB1O75553 588 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 PIK3CAP42336 1068 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 SCRN1Q12765 414 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 DEPTORQ8TB45 409 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 GIPC2Q8TF65 315 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 CCDC90BQ9GZT6 254 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 STK32BQ9NY57 414 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 TLK1Q9UKI8 766 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 PPIP5K1Q6PFW1 1433 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 IQGAP2Q13576 1575 aa10.59□□□□□ -0.71
COL4A6-201ENST00000334504 LIG4P49917 911 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms