RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 DDHD1Q8NEL9 900 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 SLC13A4Q9UKG4 626 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 DIS3Q9Y2L1 958 aaKnown RBP11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 MAP3K2Q9Y2U5 619 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 KCNJ18B7U540 433 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 GPC4O75487 556 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 KCNJ12Q14500 433 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 FBXW10Q5XX13 1052 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 TRAF7Q6Q0C0 670 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 RNF169Q8NCN4 708 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 COG1Q8WTW3 980 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 ATAD3AQ9NVI7 634 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 CAPN9O14815 690 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 ZBTB22O15209 634 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 KRT6AP02538 564 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 KRT6BP04259 564 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 GUCY1A3Q02108 690 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 SIKE1Q9BRV8 207 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 ING2Q9H160 280 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 ECT2Q9H8V3 914 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 SYNMO15061 1565 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 PRR23D1E9PI22 279 aaPredicted RBP11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 PRR23D2P0DMB1 279 aaPredicted RBP11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 OLFML2BQ68BL8 750 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 FAM81AQ8TBF8 368 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 FAM8A1Q9UBU6 413 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 FSCBQ5H9T9 825 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 BEND6Q5SZJ8 279 aaPredicted RBP11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 HNRNPLLQ8WVV9 542 aaKnown RBP11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 ZMYND12Q9H0C1 365 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 KIF17Q9P2E2 1029 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 ADGRL1O94910 1474 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 SBNO2Q9Y2G9 1366 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 MED21Q13503 144 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 ADAT2Q7Z6V5 191 aaKnown RBP11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 CLMNQ96JQ2 1002 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 ATP6V1G3Q96LB4 118 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 POC1B-GALNT4F8VUJ3 575 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 PDE5AO76074 875 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 CAPN1P07384 714 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 KLHL30Q0D2K2 578 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 TSC22D1Q15714 1073 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 KAZNQ674X7 775 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 ANGPTL8Q6UXH0 198 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 MAEAQ7L5Y9 396 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 POLKQ9UBT6 870 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 MAGEA13PA6NCF6 341 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 PPIP5K2O43314 1243 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 EFCAB14O75071 495 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 GPTP24298 496 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 IFNAR2P48551 515 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 ZNF710Q8N1W2 664 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 DNAJC9Q8WXX5 260 aa11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 CDC5LQ99459 802 aaKnown RBP11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 ZNF277Q9NRM2 450 aaPredicted RBP11.15□□□□□ -0.62
SPTBN1-201ENST00000333896 CAV1Q03135 178 aa11.15□□□□□ -0.63
SPTBN1-201ENST00000333896 TMEM154Q6P9G4 183 aa11.15□□□□□ -0.63
SPTBN1-201ENST00000333896 NELFBQ8WX92 580 aa11.15□□□□□ -0.63
SPTBN1-201ENST00000333896 CCDC87Q9NVE4 849 aa11.15□□□□□ -0.63
SPTBN1-201ENST00000333896 RHBDL2Q9NX52 303 aa11.15□□□□□ -0.63
SPTBN1-201ENST00000333896 CCDC188H7C350 402 aa11.15□□□□□ -0.63
SPTBN1-201ENST00000333896 PODXLO00592 558 aa11.15□□□□□ -0.63
SPTBN1-201ENST00000333896 HEXIM1O94992 359 aaKnown RBP11.15□□□□□ -0.63
SPTBN1-201ENST00000333896 KRT6CP48668 564 aa11.15□□□□□ -0.63
SPTBN1-201ENST00000333896 CC2D2BQ6DHV5 1058 aa11.15□□□□□ -0.63
SPTBN1-201ENST00000333896 MCUQ8NE86 351 aa11.15□□□□□ -0.63
SPTBN1-201ENST00000333896 EPB41L5Q9HCM4 733 aa11.15□□□□□ -0.63
SPTBN1-201ENST00000333896 TPCN1Q9ULQ1 816 aa11.15□□□□□ -0.63
SPTBN1-201ENST00000333896 AHCYL1O43865 530 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 KRT19P08727 400 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 CEP78Q5JTW2 689 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 NUGGCQ68CJ6 796 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 PPP1R14BQ96C90 147 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 ZFYVE19Q96K21 471 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 PITPNM3Q9BZ71 974 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 FAM95CA0A1B0GW59 222 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 INHBAP08476 426 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 ATF2P15336 505 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 NCF2P19878 526 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 UBE3AQ05086 875 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 SWT1Q5T5J6 900 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 TBC1D7Q9P0N9 293 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 LIN7AO14910 233 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 TRIM16LQ309B1 348 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 DESI2Q9BSY9 194 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 ORC4O43929 436 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 PFKFB2O60825 505 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 ITFG2Q969R8 447 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 TTC21BQ7Z4L5 1316 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 GCNT3O95395 438 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 SCP2P22307 547 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 CYP7A1P22680 504 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 PTPROQ16827 1216 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 LDHAL6AQ6ZMR3 332 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 PARD3BQ8TEW8 1205 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 TEKT4Q8WW24 435 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms