RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 PLIN2Q99541 437 aa11.97□□□□□ -0.49
CCDC172-201ENST00000333254 ZC3H12CQ9C0D7 883 aaKnown RBP11.97□□□□□ -0.49
CCDC172-201ENST00000333254 DDX4Q9NQI0 724 aaKnown RBP11.97□□□□□ -0.49
CCDC172-201ENST00000333254 NYAP2Q9P242 653 aa11.97□□□□□ -0.49
CCDC172-201ENST00000333254 SYNPO2Q9UMS6 1093 aa11.97□□□□□ -0.49
CCDC172-201ENST00000333254 MTMR7Q9Y216 660 aa11.97□□□□□ -0.49
CCDC172-201ENST00000333254 SIK3Q9Y2K2 1263 aa11.97□□□□□ -0.49
CCDC172-201ENST00000333254 STK24Q9Y6E0 443 aa11.97□□□□□ -0.49
CCDC172-201ENST00000333254 FRMPD2Q68DX3 1309 aaPredicted RBP11.96□□□□□ -0.49
CCDC172-201ENST00000333254 TDP2O95551 362 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 VAV2P52735 878 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 MARSP56192 900 aaKnown RBP11.96□□□□□ -0.5
CCDC172-201ENST00000333254 ITIH3Q06033 890 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 CKAP4Q07065 602 aaKnown RBP11.96□□□□□ -0.5
CCDC172-201ENST00000333254 AP3B2Q13367 1082 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 LONRF2Q1L5Z9 754 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 ZCWPW2Q504Y3 356 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 LRRC55Q6ZSA7 311 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 ZC3H3Q8IXZ2 948 aaKnown RBP11.96□□□□□ -0.5
CCDC172-201ENST00000333254 LRRC47Q8N1G4 583 aaKnown RBP11.96□□□□□ -0.5
CCDC172-201ENST00000333254 NLGN1Q8N2Q7 840 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 KCTD17Q8N5Z5 321 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 SNX29Q8TEQ0 813 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 RUBCNQ92622 972 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 COA7Q96BR5 231 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 ZDHHC15Q96MV8 337 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 TSG101Q99816 390 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 NDST4Q9H3R1 872 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 VAT1LQ9HCJ6 419 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 USP40Q9NVE5 1235 aa11.96□□□□□ -0.5
CCDC172-201ENST00000333254 SLX4Q8IY92 1834 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 SCN9AQ15858 1988 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 TARSL2A2RTX5 802 aaKnown RBP11.95□□□□□ -0.5
CCDC172-201ENST00000333254 TBX3O15119 743 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 PPP1R11O60927 126 aaPredicted RBP11.95□□□□□ -0.5
CCDC172-201ENST00000333254 SASH3O75995 380 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 GNA14O95837 355 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 MCM6Q14566 821 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 BEND6Q5SZJ8 279 aaPredicted RBP11.95□□□□□ -0.5
CCDC172-201ENST00000333254 CCDC122Q5T0U0 273 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 TAF3Q5VWG9 929 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 APOBEC3HQ6NTF7 200 aaKnown RBP11.95□□□□□ -0.5
CCDC172-201ENST00000333254 CDC42EP5Q6NZY7 148 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 PODNQ7Z5L7 613 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 HAS1Q92839 578 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 JAKMIP2Q96AA8 810 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 DNAJC19Q96DA6 116 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 CEP63Q96MT8 703 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 IDI2Q9BXS1 227 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 NUCKS1Q9H1E3 243 aaKnown RBP11.95□□□□□ -0.5
CCDC172-201ENST00000333254 NHEJ1Q9H9Q4 299 aaPredicted RBP11.95□□□□□ -0.5
CCDC172-201ENST00000333254 DDX25Q9UHL0 483 aaKnown RBP11.95□□□□□ -0.5
CCDC172-201ENST00000333254 PITPNM2Q9BZ72 1349 aa11.95□□□□□ -0.5
CCDC172-201ENST00000333254 SEC31AO94979 1220 aaKnown RBP11.94□□□□□ -0.5
CCDC172-201ENST00000333254 PRLRP16471 622 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 PDE6BP35913 854 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 PICALMQ13492 652 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 HDXQ7Z353 690 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 ZNF572Q7Z3I7 529 aaPredicted RBP11.94□□□□□ -0.5
CCDC172-201ENST00000333254 KIAA1328Q86T90 577 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 CRYGNQ8WXF5 182 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 SYN2Q92777 582 aaPredicted RBP11.94□□□□□ -0.5
CCDC172-201ENST00000333254 KCNMB3Q9NPA1 279 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 GPCPD1Q9NPB8 672 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 AGPAT5Q9NUQ2 364 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 SAR1BQ9Y6B6 198 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 MYH10P35580 1976 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 ATRNL1Q5VV63 1379 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 SSU72P8A0A1W2PR75 194 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 FRMD3A2A2Y4 597 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 POTEMA6NI47 508 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 PES1O00541 588 aaKnown RBP11.94□□□□□ -0.5
CCDC172-201ENST00000333254 PJA2O43164 708 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 ABL1P00519 1130 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 TNNI2P48788 182 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 MMP14P50281 582 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 GPS2Q13227 327 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 MEX3CQ5U5Q3 659 aaKnown RBP11.94□□□□□ -0.5
CCDC172-201ENST00000333254 ZNF771Q7L3S4 317 aaPredicted RBP11.94□□□□□ -0.5
CCDC172-201ENST00000333254 SLFN12Q8IYM2 578 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 MYOCDQ8IZQ8 938 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 FLAD1Q8NFF5 587 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 TRIM58Q8NG06 486 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 DDX12PQ92771 950 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 PSTPIP2Q9H939 334 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 KANSL2Q9H9L4 492 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 SLC39A2Q9NP94 309 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 BMP2KQ9NSY1 1161 aaPredicted RBP11.94□□□□□ -0.5
CCDC172-201ENST00000333254 PSD3Q9NYI0 1048 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 PUF60Q9UHX1 559 aaKnown RBP11.94□□□□□ -0.5
CCDC172-201ENST00000333254 GUCA1BQ9UMX6 200 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 L1RE1Q9UN81 338 aa11.94□□□□□ -0.5
CCDC172-201ENST00000333254 USO1O60763 962 aaKnown RBP11.93□□□□□ -0.5
CCDC172-201ENST00000333254 CYP2C19P33261 490 aa11.93□□□□□ -0.5
CCDC172-201ENST00000333254 FKBP3Q00688 224 aaKnown RBP11.93□□□□□ -0.5
CCDC172-201ENST00000333254 KIF5AQ12840 1032 aa11.93□□□□□ -0.5
CCDC172-201ENST00000333254 COASYQ13057 564 aa11.93□□□□□ -0.5
CCDC172-201ENST00000333254 SMC1AQ14683 1233 aaKnown RBP11.93□□□□□ -0.5
CCDC172-201ENST00000333254 SPA17Q15506 151 aa11.93□□□□□ -0.5
CCDC172-201ENST00000333254 FAM26FQ5R3K3 315 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms