RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 ERCC4Q92889 916 aaPredicted RBP26.29■■□□□ 1.8
TSEN54-201ENST00000333213 TTC12Q9H892 705 aaPredicted RBP26.29■■□□□ 1.8
TSEN54-201ENST00000333213 FXR2P51116 673 aaKnown RBP eCLIP26.28■■□□□ 1.8
TSEN54-201ENST00000333213 ANKRD23Q86SG2 305 aa26.28■■□□□ 1.8
TSEN54-201ENST00000333213 CHST13Q8NET6 341 aa26.28■■□□□ 1.8
TSEN54-201ENST00000333213 TIGD1Q96MW7 591 aa26.28■■□□□ 1.8
TSEN54-201ENST00000333213 SLC45A1Q9Y2W3 748 aa26.28■■□□□ 1.8
TSEN54-201ENST00000333213 LRSAM1Q6UWE0 723 aa26.27■■□□□ 1.8
TSEN54-201ENST00000333213 SMC1BQ8NDV3 1235 aa26.27■■□□□ 1.8
TSEN54-201ENST00000333213 FUCA2Q9BTY2 467 aa26.27■■□□□ 1.8
TSEN54-201ENST00000333213 EHMT1Q9H9B1 1298 aa26.27■■□□□ 1.8
TSEN54-201ENST00000333213 RABGAP1Q9Y3P9 1069 aa26.27■■□□□ 1.8
TSEN54-201ENST00000333213 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.27■■□□□ 1.8
TSEN54-201ENST00000333213 LETM1O95202 739 aaPredicted RBP26.27■■□□□ 1.8
TSEN54-201ENST00000333213 MRPS9P82933 396 aaKnown RBP26.27■■□□□ 1.8
TSEN54-201ENST00000333213 RGMBQ6NW40 437 aa26.27■■□□□ 1.8
TSEN54-201ENST00000333213 KRBA2Q6ZNG9 492 aa26.27■■□□□ 1.8
TSEN54-201ENST00000333213 RMDN3Q96TC7 470 aa26.27■■□□□ 1.8
TSEN54-201ENST00000333213 PXMP2Q9NR77 195 aa26.27■■□□□ 1.8
TSEN54-201ENST00000333213 POTEMA6NI47 508 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 MSH4O15457 936 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 ACTN4O43707 911 aaKnown RBP26.26■■□□□ 1.79
TSEN54-201ENST00000333213 EIF2AK2P19525 551 aaKnown RBP26.26■■□□□ 1.79
TSEN54-201ENST00000333213 ZNF76P36508 570 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 PGM5Q15124 567 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 CEP55Q53EZ4 464 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 SDF4Q9BRK5 362 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 MMTAG2Q9BU76 263 aaKnown RBP26.26■■□□□ 1.79
TSEN54-201ENST00000333213 SERTAD1Q9UHV2 236 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 PNMA3Q9UL41 463 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 TLL2Q9Y6L7 1015 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 LCTP09848 1927 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 TESPA1A2RU30 521 aaPredicted RBP26.26■■□□□ 1.79
TSEN54-201ENST00000333213 ITGB5P18084 799 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 ERCC3P19447 782 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 E2F4Q16254 413 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 NCAPG2Q86XI2 1143 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 AK8Q96MA6 479 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 PDCD2LQ9BRP1 358 aa26.26■■□□□ 1.79
TSEN54-201ENST00000333213 FOXN1O15353 648 aa26.25■■□□□ 1.79
TSEN54-201ENST00000333213 KARSQ15046 597 aaKnown RBP26.25■■□□□ 1.79
TSEN54-201ENST00000333213 DHX58Q96C10 678 aa26.25■■□□□ 1.79
TSEN54-201ENST00000333213 CCSER1Q9C0I3 900 aa26.25■■□□□ 1.79
TSEN54-201ENST00000333213 PCDHA12Q9UN75 941 aa26.25■■□□□ 1.79
TSEN54-201ENST00000333213 MEIS1O00470 390 aa26.24■■□□□ 1.79
TSEN54-201ENST00000333213 TBX3O15119 743 aa26.24■■□□□ 1.79
TSEN54-201ENST00000333213 PCNX4Q63HM2 1172 aa26.24■■□□□ 1.79
TSEN54-201ENST00000333213 ZSCAN30Q86W11 494 aa26.24■■□□□ 1.79
TSEN54-201ENST00000333213 CNNM3Q8NE01 707 aa26.24■■□□□ 1.79
TSEN54-201ENST00000333213 LRRC15Q8TF66 581 aa26.24■■□□□ 1.79
TSEN54-201ENST00000333213 ASTN1O14525 1302 aa26.24■■□□□ 1.79
TSEN54-201ENST00000333213 ERVK-9P63128 1117 aa26.24■■□□□ 1.79
TSEN54-201ENST00000333213 ERVK-24P63145 666 aa26.24■■□□□ 1.79
TSEN54-201ENST00000333213 PDIA5Q14554 519 aa26.24■■□□□ 1.79
TSEN54-201ENST00000333213 MXRA8Q9BRK3 442 aa26.24■■□□□ 1.79
TSEN54-201ENST00000333213 FAM155AB1AL88 458 aaPredicted RBP26.23■■□□□ 1.79
TSEN54-201ENST00000333213 CTAGE5O15320 804 aa26.23■■□□□ 1.79
TSEN54-201ENST00000333213 TOMM70O94826 608 aa26.23■■□□□ 1.79
TSEN54-201ENST00000333213 ARP10275 920 aa26.23■■□□□ 1.79
TSEN54-201ENST00000333213 MDM2Q00987 491 aaPredicted RBP26.23■■□□□ 1.79
TSEN54-201ENST00000333213 SPIRE1Q08AE8 756 aa26.23■■□□□ 1.79
TSEN54-201ENST00000333213 PLA2G4DQ86XP0 818 aa26.23■■□□□ 1.79
TSEN54-201ENST00000333213 SMCR8Q8TEV9 937 aaPredicted RBP26.23■■□□□ 1.79
TSEN54-201ENST00000333213 NUDT12Q9BQG2 462 aa26.23■■□□□ 1.79
TSEN54-201ENST00000333213 LRWD1Q9UFC0 647 aa26.23■■□□□ 1.79
TSEN54-201ENST00000333213 SLC10A3P09131 477 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 UBA7P41226 1012 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 TMEM266Q2M3C6 531 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 NAALADL2Q58DX5 795 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 ARHGEF16Q5VV41 709 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 SLFN12Q8IYM2 578 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 ANKRD35Q8N283 1001 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 PDLIM2Q96JY6 352 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 MAF1Q9H063 256 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 FBXO40Q9UH90 709 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 UBIAD1Q9Y5Z9 338 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 IGF2BP3O00425 579 aaKnown RBP eCLIP26.22■■□□□ 1.79
TSEN54-201ENST00000333213 MARCH6O60337 910 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 SLC25A27O95847 323 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 CNTN2Q02246 1040 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 CABP7Q86V35 215 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 GRAMD1CQ8IYS0 662 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 ANKRD13CQ8N6S4 541 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 FAM20AQ96MK3 541 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 NAP1L5Q96NT1 182 aaPredicted RBP26.22■■□□□ 1.79
TSEN54-201ENST00000333213 WDR11Q9BZH6 1224 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 PORCNQ9H237 461 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 DISC1Q9NRI5 854 aa26.22■■□□□ 1.79
TSEN54-201ENST00000333213 PCNTO95613 3336 aa26.2■■□□□ 1.79
TSEN54-201ENST00000333213 A0A087WWV3 80 aa26.2■■□□□ 1.79
TSEN54-201ENST00000333213 SLFN14P0C7P3 912 aa26.2■■□□□ 1.79
TSEN54-201ENST00000333213 PNOCQ13519 176 aa26.2■■□□□ 1.79
TSEN54-201ENST00000333213 PDXDC2PQ6P474 469 aa26.2■■□□□ 1.79
TSEN54-201ENST00000333213 VSIG10LQ86VR7 867 aa26.2■■□□□ 1.79
TSEN54-201ENST00000333213 PLIN2Q99541 437 aa26.2■■□□□ 1.79
TSEN54-201ENST00000333213 KIAA1468Q9P260 1216 aa26.2■■□□□ 1.79
TSEN54-201ENST00000333213 VAV3Q9UKW4 847 aa26.2■■□□□ 1.79
TSEN54-201ENST00000333213 NR3C2P08235 984 aa26.2■■□□□ 1.78
TSEN54-201ENST00000333213 MYCLP12524 364 aaPredicted RBP26.2■■□□□ 1.78
TSEN54-201ENST00000333213 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms