RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 CCNE1P24864 410 aa20.27■□□□□ 0.84
LYSMD4-201ENST00000332728 KCNJ6P48051 423 aa20.27■□□□□ 0.84
LYSMD4-201ENST00000332728 SMCR8Q8TEV9 937 aaPredicted RBP20.27■□□□□ 0.84
LYSMD4-201ENST00000332728 GLIS2Q9BZE0 524 aaPredicted RBP20.27■□□□□ 0.84
LYSMD4-201ENST00000332728 KCNB1Q14721 858 aa20.27■□□□□ 0.84
LYSMD4-201ENST00000332728 GLIPR1L2Q4G1C9 344 aa20.27■□□□□ 0.84
LYSMD4-201ENST00000332728 GPATCH4Q5T3I0 446 aaKnown RBP20.27■□□□□ 0.84
LYSMD4-201ENST00000332728 RAD54LQ92698 747 aa20.27■□□□□ 0.84
LYSMD4-201ENST00000332728 IKZF4Q9H2S9 585 aa20.27■□□□□ 0.84
LYSMD4-201ENST00000332728 RASSF10A6NK89 507 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 KRT18P05783 430 aaKnown RBP20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 CLCN6P51797 869 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 SPAG1Q07617 926 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 DRC1Q96MC2 740 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 C7orf25Q9BPX7 421 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 TMEM39BQ9GZU3 492 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 SFI1A8K8P3 1242 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 KIF5CO60282 957 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 CFBP00751 764 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 RXRBP28702 533 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 PABPC4Q13310 644 aaKnown RBP eCLIP20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 ZNF397Q8NF99 534 aaPredicted RBP20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 REXO2Q9Y3B8 237 aaKnown RBP20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 MYH4Q9Y623 1939 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 LRRC10BA6NIK2 292 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 SRGAP2O75044 1071 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 AMPD3Q01432 767 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 FBXO28Q9NVF7 368 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 SUGT1Q9Y2Z0 365 aa20.26■□□□□ 0.83
LYSMD4-201ENST00000332728 MYH7BA7E2Y1 1941 aa20.25■□□□□ 0.83
LYSMD4-201ENST00000332728 MED24O75448 989 aa20.25■□□□□ 0.83
LYSMD4-201ENST00000332728 LARGE2Q8N3Y3 721 aa20.25■□□□□ 0.83
LYSMD4-201ENST00000332728 ESYT2A0FGR8 921 aa20.25■□□□□ 0.83
LYSMD4-201ENST00000332728 PSMD14O00487 310 aa20.25■□□□□ 0.83
LYSMD4-201ENST00000332728 MEIS2O14770 477 aa20.25■□□□□ 0.83
LYSMD4-201ENST00000332728 ZBTB39O15060 712 aa20.25■□□□□ 0.83
LYSMD4-201ENST00000332728 FAM83BQ5T0W9 1011 aa20.25■□□□□ 0.83
LYSMD4-201ENST00000332728 WDR59Q6PJI9 974 aa20.25■□□□□ 0.83
LYSMD4-201ENST00000332728 MACROD2A1Z1Q3 448 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 ARID5AQ03989 594 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 CNNM4Q6P4Q7 775 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 CYP26C1Q6V0L0 522 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 GPBP1Q86WP2 473 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 ZNF507Q8TCN5 953 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 CAPZA3Q96KX2 299 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 LTBP1Q14766 1721 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 RCCD1A6NED2 376 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 FAM86B1E9PN63 330 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 TADA3O75528 432 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 FAM86B2P0C5J1 330 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 RHOXF2BP0C7M4 288 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 CLK2P49760 499 aaKnown RBP20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 HERC4Q5GLZ8 1057 aaPredicted RBP20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 MIIPQ5JXC2 388 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 ANKRD13CQ8N6S4 541 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 RHOXF2Q9BQY4 288 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 NLRC4Q9NPP4 1024 aa20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 EPN1Q9Y6I3 576 aaPredicted RBP20.24■□□□□ 0.83
LYSMD4-201ENST00000332728 PLIN4Q96Q06 1357 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 TRAF5O00463 557 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 ZNF76P36508 570 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 ARHGAP4P98171 946 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 SLC15A2Q16348 729 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 OR8K1Q8NGG5 319 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 PSMB7Q99436 277 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 THAP9Q9H5L6 903 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 RGL1Q9NZL6 768 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 FXR2P51116 673 aaKnown RBP eCLIP20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 COASYQ13057 564 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 TSR1Q2NL82 804 aaKnown RBP20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 FBXO11Q86XK2 927 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 DHTKD1Q96HY7 919 aaPredicted RBP20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 RAB34Q9BZG1 259 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 PANK4Q9NVE7 773 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 MRFAP1Q9Y605 127 aa20.23■□□□□ 0.83
LYSMD4-201ENST00000332728 NDUFA10O95299 355 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 KCTD19Q17RG1 926 aaPredicted RBP20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 CCDC17Q96LX7 622 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 DNA2P51530 1060 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 MAP3K9P80192 1104 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 MRPS25P82663 173 aaKnown RBP20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 CT47A1Q5JQC4 288 aaPredicted RBP20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 SYDE2Q5VT97 1194 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 DNAAF5Q86Y56 855 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 TMTC1Q8IUR5 882 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 PIGOQ8TEQ8 1089 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 LACRTQ9GZZ8 138 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 FZD1Q9UP38 647 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 RSPH10B2B2RC85 870 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 DDX39AO00148 427 aaKnown RBP20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 PLA2G4BP0C869 781 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 RSPH10BP0C881 870 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 BMP3P12645 472 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 SMARCA1P28370 1054 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 ARHGAP25P42331 645 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 UNC13DQ70J99 1090 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 KIAA1328Q86T90 577 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 SH2D3AQ9BRG2 576 aa20.22■□□□□ 0.83
LYSMD4-201ENST00000332728 SPDYE3A6NKU9 549 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms