RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 FAM160B2Q86V87 743 aa17.75■□□□□ 0.43
PDGFB-201ENST00000331163 TMX1Q9H3N1 280 aa17.75■□□□□ 0.43
PDGFB-201ENST00000331163 OGFRQ9NZT2 677 aa17.75■□□□□ 0.43
PDGFB-201ENST00000331163 GDAQ9Y2T3 454 aa17.75■□□□□ 0.43
PDGFB-201ENST00000331163 MATR3P43243 847 aaKnown RBP eCLIP17.75■□□□□ 0.43
PDGFB-201ENST00000331163 ANKRD13AQ8IZ07 590 aa17.75■□□□□ 0.43
PDGFB-201ENST00000331163 RIC8AQ9NPQ8 531 aa17.75■□□□□ 0.43
PDGFB-201ENST00000331163 LAMB2P55268 1798 aa17.75■□□□□ 0.43
PDGFB-201ENST00000331163 STIM1Q13586 685 aa17.75■□□□□ 0.43
PDGFB-201ENST00000331163 RDH13Q8NBN7 331 aa17.75■□□□□ 0.43
PDGFB-201ENST00000331163 TEPSINQ96N21 525 aa17.75■□□□□ 0.43
PDGFB-201ENST00000331163 NPHP3-ACAD11A0A0J9YXS1 232 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 P2RX7Q99572 595 aaKnown RBP17.74■□□□□ 0.43
PDGFB-201ENST00000331163 VPS33BQ9H267 617 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 PDE4DIPQ5VU43 2346 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 USP2O75604 605 aaPredicted RBP17.74■□□□□ 0.43
PDGFB-201ENST00000331163 TPM3P06753 285 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 GOLGA8FQ08AF8 430 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 GOLGA8DPQ0D2H9 430 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 SNW1Q13573 536 aaKnown RBP17.74■□□□□ 0.43
PDGFB-201ENST00000331163 ERMNQ8TAM6 284 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 VPS16Q9H269 839 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 NFE2L3Q9Y4A8 694 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 A0A087X0B3 334 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 POTEB2H3BUK9 544 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 RBAK-RBAKDNI3L0D1 243 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 WDR46O15213 610 aaKnown RBP17.74■□□□□ 0.43
PDGFB-201ENST00000331163 ATP1A3P13637 1013 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 CEP135Q66GS9 1140 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.74■□□□□ 0.43
PDGFB-201ENST00000331163 SCLT1Q96NL6 688 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 NUDT12Q9BQG2 462 aa17.74■□□□□ 0.43
PDGFB-201ENST00000331163 CCL15-CCL14A0A0B4J2E2 113 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 HARSP12081 509 aaKnown RBP17.73■□□□□ 0.43
PDGFB-201ENST00000331163 CCL15Q16663 113 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 RESP18Q5W5W9 173 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 ANKRD31Q8N7Z5 1873 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 A0A1W2PQ27 194 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 A0A1W2PQ64 194 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 A0A1W2PQD8 194 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 CNTN2Q02246 1040 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 METTL16Q86W50 562 aaKnown RBP17.73■□□□□ 0.43
PDGFB-201ENST00000331163 GPBP1Q86WP2 473 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 TMEM87AQ8NBN3 555 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 ANKRD20A12PQ8NF67 263 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 CACTINQ8WUQ7 758 aaKnown RBP17.73■□□□□ 0.43
PDGFB-201ENST00000331163 BHMT2Q9H2M3 363 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 FANCLQ9NW38 375 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 MAGEC2Q9UBF1 373 aaPredicted RBP17.73■□□□□ 0.43
PDGFB-201ENST00000331163 ZBTB39O15060 712 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 TBCAO75347 108 aaKnown RBP17.73■□□□□ 0.43
PDGFB-201ENST00000331163 MIER3Q7Z3K6 550 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 DPP9Q86TI2 863 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 NLRX1Q86UT6 975 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 ANKS1AQ92625 1134 aa17.73■□□□□ 0.43
PDGFB-201ENST00000331163 ZNF215Q9UL58 517 aaPredicted RBP17.73■□□□□ 0.43
PDGFB-201ENST00000331163 IGBP1P78318 339 aa17.72■□□□□ 0.43
PDGFB-201ENST00000331163 ATP2C1P98194 919 aaPredicted RBP17.72■□□□□ 0.43
PDGFB-201ENST00000331163 KCTD2Q14681 263 aa17.72■□□□□ 0.43
PDGFB-201ENST00000331163 ELF2Q15723 593 aa17.72■□□□□ 0.43
PDGFB-201ENST00000331163 GALNT17Q6IS24 598 aa17.72■□□□□ 0.43
PDGFB-201ENST00000331163 PAGE5Q96GU1 130 aa17.72■□□□□ 0.43
PDGFB-201ENST00000331163 WDR11Q9BZH6 1224 aa17.72■□□□□ 0.43
PDGFB-201ENST00000331163 SH3GLB2Q9NR46 395 aa17.72■□□□□ 0.43
PDGFB-201ENST00000331163 USP27XA6NNY8 438 aa17.72■□□□□ 0.43
PDGFB-201ENST00000331163 UBASH3AP57075 661 aa17.72■□□□□ 0.43
PDGFB-201ENST00000331163 HOXC10Q9NYD6 342 aa17.72■□□□□ 0.43
PDGFB-201ENST00000331163 TMEM150BA6NC51 233 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 TRAF1Q13077 416 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 NPY5RQ15761 445 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 PNMA8AQ86V59 439 aaPredicted RBP17.71■□□□□ 0.43
PDGFB-201ENST00000331163 ANKRD7Q92527 254 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 LRP5O75197 1615 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 SYCP3Q8IZU3 236 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 GLG1Q92896 1179 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 GMCL1Q96IK5 515 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 MYH7P12883 1935 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 SMTNL1A8MU46 457 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 ARP10275 920 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 CNGA1P29973 690 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 MTIF2P46199 727 aaKnown RBP17.71■□□□□ 0.43
PDGFB-201ENST00000331163 AMPD3Q01432 767 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 PTPN14Q15678 1187 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 KANK3Q6NY19 840 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 GBA2Q9HCG7 927 aaPredicted RBP17.71■□□□□ 0.43
PDGFB-201ENST00000331163 DNM3Q9UQ16 869 aa17.71■□□□□ 0.43
PDGFB-201ENST00000331163 COL4A5P29400 1685 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 CCDC169A6NNP5 214 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 FAM86B1E9PN63 330 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 NOP56O00567 594 aaKnown RBP17.7■□□□□ 0.42
PDGFB-201ENST00000331163 USO1O60763 962 aaKnown RBP17.7■□□□□ 0.42
PDGFB-201ENST00000331163 FAM86B2P0C5J1 330 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 TRAPPC10P48553 1259 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 FKBP1CQ5VVH2 108 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 IL31RAQ8NI17 732 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 ROBO3Q96MS0 1386 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 IGKV6D-41A0A0C4DH26 115 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 TRIM49BA6NDI0 452 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 N4BP3O15049 544 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 MTMR1Q13613 665 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms