RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 POLRMTO00411 1230 aaKnown RBP20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 GLI1P08151 1106 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 NF2P35240 595 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 GYG1P46976 350 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 MAP3K12Q12852 859 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 FIGNQ5HY92 759 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 CEP85LQ5SZL2 805 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 C6orf89Q6UWU4 347 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 CCDC125Q86Z20 511 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 NLGN1Q8N2Q7 840 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 CSGALNACT2Q8N6G5 542 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 ATP6V1G3Q96LB4 118 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 SRRM3A6NNA2 597 aaPredicted RBP20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 KLRC4O43908 158 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 TYW1BQ6NUM6 668 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 PIK3AP1Q6ZUJ8 805 aa20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 N4BP2L2Q92802 583 aaPredicted RBP20.04■□□□□ 0.8
CLSTN3-202ENST00000331148 ZNF804BA4D1E1 1349 aa20.03■□□□□ 0.8
CLSTN3-202ENST00000331148 SCP2P22307 547 aa20.03■□□□□ 0.8
CLSTN3-202ENST00000331148 LONP1P36776 959 aaKnown RBP20.03■□□□□ 0.8
CLSTN3-202ENST00000331148 TRAPPC10P48553 1259 aa20.03■□□□□ 0.8
CLSTN3-202ENST00000331148 KIF11P52732 1056 aa20.03■□□□□ 0.8
CLSTN3-202ENST00000331148 C1orf131Q8NDD1 294 aaKnown RBP20.03■□□□□ 0.8
CLSTN3-202ENST00000331148 RPGRQ92834 1020 aaKnown RBP20.03■□□□□ 0.8
CLSTN3-202ENST00000331148 CNOT6LQ96LI5 555 aaKnown RBP20.03■□□□□ 0.8
CLSTN3-202ENST00000331148 CENPHQ9H3R5 247 aa20.03■□□□□ 0.8
CLSTN3-202ENST00000331148 DISC1Q9NRI5 854 aa20.03■□□□□ 0.8
CLSTN3-202ENST00000331148 ARHGAP20Q9P2F6 1191 aa20.03■□□□□ 0.8
CLSTN3-202ENST00000331148 GNAT2P19087 354 aa20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 HNRNPH3P31942 346 aaKnown RBP20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 CRY2Q49AN0 593 aa20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 GIMAP8Q8ND71 665 aaPredicted RBP20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 ZNF622Q969S3 477 aaKnown RBP eCLIP20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 TNS1Q9HBL0 1735 aaKnown RBP20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 ESYT3A0FGR9 886 aa20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 ZSCAN5CA6NGD5 496 aaPredicted RBP20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 HMGB1P1B2RPK0 211 aaPredicted RBP20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 E7EVH7 732 aa20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 HEXIM1O94992 359 aaKnown RBP20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 CDR1P51861 262 aa20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 ITGB3BPQ13352 177 aaPredicted RBP20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 MIIPQ5JXC2 388 aa20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 IQCA1Q86XH1 822 aa20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 CCDC155Q8N6L0 562 aa20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 IFT81Q8WYA0 676 aa20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 EEF2KMTQ96G04 330 aa20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 FAM84BQ96KN1 310 aaPredicted RBP20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 ERGIC2Q96RQ1 377 aa20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 TLR10Q9BXR5 811 aa20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 ACTR5Q9H9F9 607 aaPredicted RBP20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 ODF2LQ9ULJ1 636 aa20.02■□□□□ 0.8
CLSTN3-202ENST00000331148 MYH2Q9UKX2 1941 aa20.02■□□□□ 0.79
CLSTN3-202ENST00000331148 RHOBTB3O94955 611 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 LCA5LO95447 670 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 GUCY2DQ02846 1103 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 NAALADL2Q58DX5 795 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 C2CD5Q86YS7 1000 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 CYFIP2Q96F07 1278 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 EPB41L5Q9HCM4 733 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 PLAGL2Q9UPG8 496 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 PNPLA7Q6ZV29 1317 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 TMCO5BA8MYB1 307 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 EIF4A3P38919 411 aaKnown RBP20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 MTIF2P46199 727 aaKnown RBP20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 GUCY2FP51841 1108 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 ATP2B2Q01814 1243 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 ARL6IP4Q66PJ3 421 aaKnown RBP20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 CCDC121Q6ZUS5 278 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 ENAHQ8N8S7 591 aaPredicted RBP20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 MIEF2Q96C03 454 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 DHTKD1Q96HY7 919 aaPredicted RBP20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 MS4A14Q96JA4 679 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 NOC4LQ9BVI4 516 aaKnown RBP20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 VEZTQ9HBM0 779 aa20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 RBM28Q9NW13 759 aaKnown RBP20.01■□□□□ 0.79
CLSTN3-202ENST00000331148 SNCBQ16143 134 aa20■□□□□ 0.79
CLSTN3-202ENST00000331148 CFAP221Q4G0U5 840 aa20■□□□□ 0.79
CLSTN3-202ENST00000331148 PPP4R3AQ6IN85 833 aa20■□□□□ 0.79
CLSTN3-202ENST00000331148 ZSCAN29Q8IWY8 852 aaPredicted RBP20■□□□□ 0.79
CLSTN3-202ENST00000331148 ESR2Q92731 530 aa20■□□□□ 0.79
CLSTN3-202ENST00000331148 CCDC114Q96M63 670 aa20■□□□□ 0.79
CLSTN3-202ENST00000331148 SALL4Q9UJQ4 1053 aa20■□□□□ 0.79
CLSTN3-202ENST00000331148 FBXO33Q7Z6M2 555 aa20■□□□□ 0.79
CLSTN3-202ENST00000331148 CATIPQ7Z7H3 387 aa20■□□□□ 0.79
CLSTN3-202ENST00000331148 FAM114A1Q8IWE2 563 aa20■□□□□ 0.79
CLSTN3-202ENST00000331148 FAM212AQ96EL1 285 aa20■□□□□ 0.79
CLSTN3-202ENST00000331148 RBM17Q96I25 401 aaKnown RBP20■□□□□ 0.79
CLSTN3-202ENST00000331148 GOLGA6L7A0A1B0GV03 622 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 TMTC3Q6ZXV5 915 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 PARP9Q8IXQ6 854 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 C4orf32Q8N8J7 132 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 P2RX5Q93086 422 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 IQCDQ96DY2 449 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 DOCK2Q92608 1830 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 CNTNAP5Q8WYK1 1306 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 KLHDC7AQ5VTJ3 777 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 CYB5D1Q6P9G0 228 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 WHAMMQ8TF30 809 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 CASKIN2Q8WXE0 1202 aa19.99■□□□□ 0.79
CLSTN3-202ENST00000331148 ZSCAN10Q96SZ4 725 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms