RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 ZNF576Q9H609 170 aa17.04■□□□□ 0.32
TSPO-201ENST00000329563 LY9Q9HBG7 655 aa17.04■□□□□ 0.32
TSPO-201ENST00000329563 VCANP13611 3396 aa17.03■□□□□ 0.32
TSPO-201ENST00000329563 SCN10AQ9Y5Y9 1956 aa17.03■□□□□ 0.32
TSPO-201ENST00000329563 A6NJR5 290 aa17.03■□□□□ 0.32
TSPO-201ENST00000329563 NKRFO15226 690 aaKnown RBP eCLIP17.03■□□□□ 0.32
TSPO-201ENST00000329563 RGS20O76081 388 aa17.03■□□□□ 0.32
TSPO-201ENST00000329563 MYL3P08590 195 aa17.03■□□□□ 0.32
TSPO-201ENST00000329563 SUPT20HL2P0C7V6 817 aa17.03■□□□□ 0.32
TSPO-201ENST00000329563 HOXA13P31271 388 aaPredicted RBP17.03■□□□□ 0.32
TSPO-201ENST00000329563 LY6KQ17RY6 165 aa17.03■□□□□ 0.32
TSPO-201ENST00000329563 SEPT14Q6ZU15 432 aa17.03■□□□□ 0.32
TSPO-201ENST00000329563 RPUSD2Q8IZ73 545 aaKnown RBP17.03■□□□□ 0.32
TSPO-201ENST00000329563 VWCEQ96DN2 955 aa17.03■□□□□ 0.32
TSPO-201ENST00000329563 GAS2L1Q99501 681 aaPredicted RBP17.03■□□□□ 0.32
TSPO-201ENST00000329563 COL25A1Q9BXS0 654 aaPredicted RBP17.03■□□□□ 0.32
TSPO-201ENST00000329563 ALDH8A1Q9H2A2 487 aaPredicted RBP17.03■□□□□ 0.32
TSPO-201ENST00000329563 PXMP2Q9NR77 195 aa17.03■□□□□ 0.32
TSPO-201ENST00000329563 TRMT13Q9NUP7 481 aaKnown RBP17.03■□□□□ 0.32
TSPO-201ENST00000329563 MSRAQ9UJ68 235 aa17.03■□□□□ 0.32
TSPO-201ENST00000329563 PCDHA1Q9Y5I3 950 aa17.03■□□□□ 0.32
TSPO-201ENST00000329563 NCOR1O75376 2440 aa17.03■□□□□ 0.32
TSPO-201ENST00000329563 ERICH2A1L162 156 aa17.02■□□□□ 0.32
TSPO-201ENST00000329563 FGBP02675 491 aa17.02■□□□□ 0.32
TSPO-201ENST00000329563 ACRP10323 421 aa17.02■□□□□ 0.32
TSPO-201ENST00000329563 ARHGAP1Q07960 439 aa17.02■□□□□ 0.32
TSPO-201ENST00000329563 RABEP1Q15276 862 aa17.02■□□□□ 0.32
TSPO-201ENST00000329563 RASIP1Q5U651 963 aa17.02■□□□□ 0.32
TSPO-201ENST00000329563 ZNF365Q70YC5 407 aa17.02■□□□□ 0.32
TSPO-201ENST00000329563 RASEFQ8IZ41 740 aa17.02■□□□□ 0.32
TSPO-201ENST00000329563 IL31RAQ8NI17 732 aa17.02■□□□□ 0.32
TSPO-201ENST00000329563 HERVK_113Q902F9 699 aa17.02■□□□□ 0.32
TSPO-201ENST00000329563 SYMPKQ92797 1274 aaKnown RBP17.02■□□□□ 0.32
TSPO-201ENST00000329563 NEK1Q96PY6 1258 aa17.02■□□□□ 0.32
TSPO-201ENST00000329563 NOC4LQ9BVI4 516 aaKnown RBP17.02■□□□□ 0.32
TSPO-201ENST00000329563 WNT8AQ9H1J5 351 aa17.02■□□□□ 0.32
TSPO-201ENST00000329563 RBAK-RBAKDNI3L0D1 243 aa17.01■□□□□ 0.31
TSPO-201ENST00000329563 PRC1O43663 620 aa17.01■□□□□ 0.31
TSPO-201ENST00000329563 KPNA6O60684 536 aa17.01■□□□□ 0.31
TSPO-201ENST00000329563 NR3C2P08235 984 aa17.01■□□□□ 0.31
TSPO-201ENST00000329563 PFKMP08237 780 aa17.01■□□□□ 0.31
TSPO-201ENST00000329563 TTLL4Q14679 1199 aa17.01■□□□□ 0.31
TSPO-201ENST00000329563 STXBP2Q15833 593 aa17.01■□□□□ 0.31
TSPO-201ENST00000329563 NBPF20Q3BBV1 942 aa17.01■□□□□ 0.31
TSPO-201ENST00000329563 ARHGEF16Q5VV41 709 aa17.01■□□□□ 0.31
TSPO-201ENST00000329563 ZNF654Q8IZM8 581 aa17.01■□□□□ 0.31
TSPO-201ENST00000329563 ZFP91Q96JP5 570 aaPredicted RBP17.01■□□□□ 0.31
TSPO-201ENST00000329563 IWS1Q96ST2 819 aa17.01■□□□□ 0.31
TSPO-201ENST00000329563 PDCD2LQ9BRP1 358 aa17.01■□□□□ 0.31
TSPO-201ENST00000329563 GBF1Q92538 1859 aa17.01■□□□□ 0.31
TSPO-201ENST00000329563 BAZ2BQ9UIF8 2168 aaKnown RBP17.01■□□□□ 0.31
TSPO-201ENST00000329563 SH2B2O14492 632 aaPredicted RBP17■□□□□ 0.31
TSPO-201ENST00000329563 CYP2C9P11712 490 aa17■□□□□ 0.31
TSPO-201ENST00000329563 CCL23P55773 120 aa17■□□□□ 0.31
TSPO-201ENST00000329563 GRIN2CQ14957 1233 aa17■□□□□ 0.31
TSPO-201ENST00000329563 SART3Q15020 963 aaKnown RBP17■□□□□ 0.31
TSPO-201ENST00000329563 BLOC1S2Q6QNY1 142 aa17■□□□□ 0.31
TSPO-201ENST00000329563 CATIPQ7Z7H3 387 aa17■□□□□ 0.31
TSPO-201ENST00000329563 AFG1LQ8WV93 481 aa17■□□□□ 0.31
TSPO-201ENST00000329563 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
TSPO-201ENST00000329563 JAKMIP1Q96N16 626 aaKnown RBP17■□□□□ 0.31
TSPO-201ENST00000329563 MTG1Q9BT17 334 aaPredicted RBP17■□□□□ 0.31
TSPO-201ENST00000329563 PBX4Q9BYU1 374 aa17■□□□□ 0.31
TSPO-201ENST00000329563 DDX41Q9UJV9 622 aaKnown RBP17■□□□□ 0.31
TSPO-201ENST00000329563 CYP46A1Q9Y6A2 500 aa17■□□□□ 0.31
TSPO-201ENST00000329563 PNMA6FA0A0J9YX94 578 aa16.99■□□□□ 0.31
TSPO-201ENST00000329563 GRXCR1A8MXD5 290 aa16.99■□□□□ 0.31
TSPO-201ENST00000329563 PLEKHA8P1O95397 391 aa16.99■□□□□ 0.31
TSPO-201ENST00000329563 MMP3P08254 477 aa16.99■□□□□ 0.31
TSPO-201ENST00000329563 RXRAP19793 462 aa16.99■□□□□ 0.31
TSPO-201ENST00000329563 PGM5Q15124 567 aa16.99■□□□□ 0.31
TSPO-201ENST00000329563 CMTR1Q8N1G2 835 aaKnown RBP16.99■□□□□ 0.31
TSPO-201ENST00000329563 KAT2BQ92831 832 aa16.99■□□□□ 0.31
TSPO-201ENST00000329563 GPKOWQ92917 476 aaPredicted RBP eCLIP16.99■□□□□ 0.31
TSPO-201ENST00000329563 CTAGE1Q96RT6 745 aa16.99■□□□□ 0.31
TSPO-201ENST00000329563 KIF2CQ99661 725 aa16.99■□□□□ 0.31
TSPO-201ENST00000329563 LRRC2Q9BYS8 371 aa16.99■□□□□ 0.31
TSPO-201ENST00000329563 ZSWIM6Q9HCJ5 1215 aa16.99■□□□□ 0.31
TSPO-201ENST00000329563 TSHZ2Q9NRE2 1034 aa16.99■□□□□ 0.31
TSPO-201ENST00000329563 CXXC1Q9P0U4 656 aaPredicted RBP16.99■□□□□ 0.31
TSPO-201ENST00000329563 EIF3JO75822 258 aaKnown RBP16.98■□□□□ 0.31
TSPO-201ENST00000329563 DDAH1O94760 285 aa16.98■□□□□ 0.31
TSPO-201ENST00000329563 GH1P01241 217 aa16.98■□□□□ 0.31
TSPO-201ENST00000329563 CASTP20810 708 aaKnown RBP16.98■□□□□ 0.31
TSPO-201ENST00000329563 SP2Q02086 613 aa16.98■□□□□ 0.31
TSPO-201ENST00000329563 RUFY3Q7L099 469 aa16.98■□□□□ 0.31
TSPO-201ENST00000329563 DHX32Q7L7V1 743 aaKnown RBP16.98■□□□□ 0.31
TSPO-201ENST00000329563 VSIG10LQ86VR7 867 aa16.98■□□□□ 0.31
TSPO-201ENST00000329563 RAB11FIP4Q86YS3 637 aa16.98■□□□□ 0.31
TSPO-201ENST00000329563 SRBD1Q8N5C6 995 aaKnown RBP16.98■□□□□ 0.31
TSPO-201ENST00000329563 SCLYQ96I15 445 aa16.98■□□□□ 0.31
TSPO-201ENST00000329563 MAP3K14Q99558 947 aa16.98■□□□□ 0.31
TSPO-201ENST00000329563 MTA3Q9BTC8 594 aa16.98■□□□□ 0.31
TSPO-201ENST00000329563 SLC28A3Q9HAS3 691 aa16.98■□□□□ 0.31
TSPO-201ENST00000329563 MAP3K20Q9NYL2 800 aaKnown RBP16.98■□□□□ 0.31
TSPO-201ENST00000329563 SCN5AQ14524 2016 aa16.97■□□□□ 0.31
TSPO-201ENST00000329563 TANC1Q9C0D5 1861 aa16.97■□□□□ 0.31
TSPO-201ENST00000329563 ST18O60284 1047 aa16.97■□□□□ 0.31
TSPO-201ENST00000329563 MYCLP12524 364 aaPredicted RBP16.97■□□□□ 0.31
TSPO-201ENST00000329563 ACTN1P12814 892 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms