RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 NOL9Q5SY16 702 aaKnown RBP22.76■■□□□ 1.23
RIPPLY3-201ENST00000329553 CYP2W1Q8TAV3 490 aa22.76■■□□□ 1.23
RIPPLY3-201ENST00000329553 ENOX1Q8TC92 643 aaKnown RBP22.76■■□□□ 1.23
RIPPLY3-201ENST00000329553 SNX29Q8TEQ0 813 aa22.76■■□□□ 1.23
RIPPLY3-201ENST00000329553 RAVER2Q9HCJ3 691 aaKnown RBP22.76■■□□□ 1.23
RIPPLY3-201ENST00000329553 PHIPQ8WWQ0 1821 aa22.76■■□□□ 1.23
RIPPLY3-201ENST00000329553 PPP1R3GB7ZBB8 358 aa22.76■■□□□ 1.23
RIPPLY3-201ENST00000329553 ERCC5P28715 1186 aaPredicted RBP22.76■■□□□ 1.23
RIPPLY3-201ENST00000329553 HMGCS2P54868 508 aa22.76■■□□□ 1.23
RIPPLY3-201ENST00000329553 DPY19L2Q6NUT2 758 aa22.76■■□□□ 1.23
RIPPLY3-201ENST00000329553 SULF1Q8IWU6 871 aa22.76■■□□□ 1.23
RIPPLY3-201ENST00000329553 TRMT44Q8IYL2 757 aaKnown RBP22.76■■□□□ 1.23
RIPPLY3-201ENST00000329553 BLOC1S4Q9NUP1 217 aa22.76■■□□□ 1.23
RIPPLY3-201ENST00000329553 CTIFO43310 598 aaKnown RBP22.75■■□□□ 1.23
RIPPLY3-201ENST00000329553 MYL1P05976 194 aa22.75■■□□□ 1.23
RIPPLY3-201ENST00000329553 SLFN12Q8IYM2 578 aa22.75■■□□□ 1.23
RIPPLY3-201ENST00000329553 CLEC4DQ8WXI8 215 aa22.75■■□□□ 1.23
RIPPLY3-201ENST00000329553 C19orf81C9J6K1 198 aa22.74■■□□□ 1.23
RIPPLY3-201ENST00000329553 KLRC4O43908 158 aa22.74■■□□□ 1.23
RIPPLY3-201ENST00000329553 ZNF76P36508 570 aa22.74■■□□□ 1.23
RIPPLY3-201ENST00000329553 ECM1Q16610 540 aa22.74■■□□□ 1.23
RIPPLY3-201ENST00000329553 CT47A1Q5JQC4 288 aaPredicted RBP22.74■■□□□ 1.23
RIPPLY3-201ENST00000329553 C12orf42Q96LP6 360 aa22.74■■□□□ 1.23
RIPPLY3-201ENST00000329553 RMND1Q9NWS8 449 aa22.74■■□□□ 1.23
RIPPLY3-201ENST00000329553 TBX3O15119 743 aa22.74■■□□□ 1.23
RIPPLY3-201ENST00000329553 KLHL10Q6JEL2 608 aa22.74■■□□□ 1.23
RIPPLY3-201ENST00000329553 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.74■■□□□ 1.23
RIPPLY3-201ENST00000329553 CDK5RAP3Q96JB5 506 aa22.74■■□□□ 1.23
RIPPLY3-201ENST00000329553 IFNKQ9P0W0 207 aa22.74■■□□□ 1.23
RIPPLY3-201ENST00000329553 AFG3L2Q9Y4W6 797 aa22.74■■□□□ 1.23
RIPPLY3-201ENST00000329553 NFIBO00712 420 aa22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 ALAS1P13196 640 aa22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 UBXN2AP68543 259 aa22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 FANCCQ00597 558 aa22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 DHX8Q14562 1220 aaKnown RBP22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 ZNF658Q5TYW1 1059 aaPredicted RBP22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 NFE2L3Q9Y4A8 694 aa22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 MSH4O15457 936 aa22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 HSD17B4P51659 736 aa22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 KMT5BQ4FZB7 885 aa22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 ATG4CQ96DT6 458 aa22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 WNK4Q96J92 1243 aa22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 L3MBTL3Q96JM7 780 aaPredicted RBP22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 C7orf25Q9BPX7 421 aa22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 TRIM9Q9C026 710 aa22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 XPO4Q9C0E2 1151 aaKnown RBP22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 STK17AQ9UEE5 414 aa22.73■■□□□ 1.23
RIPPLY3-201ENST00000329553 IGLV3-22A0A075B6J6 115 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 VWA5AO00534 786 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 ZBED4O75132 1171 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 STAT3P40763 770 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 MAP3K9P80192 1104 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 MCM6Q14566 821 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 TMEM119Q4V9L6 283 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 KRT26Q7Z3Y9 468 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 KCNK18Q7Z418 384 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 C16orf45Q96MC5 204 aaPredicted RBP22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 FAM20AQ96MK3 541 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 SPIRE1Q08AE8 756 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 VGLL4Q14135 290 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 KCNB1Q14721 858 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 GPR162Q16538 588 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 MUM1L1Q5H9M0 696 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 SV2BQ7L1I2 683 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 GDAQ9Y2T3 454 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 SNCAIPQ9Y6H5 919 aa22.72■■□□□ 1.23
RIPPLY3-201ENST00000329553 STX17P56962 302 aa22.71■■□□□ 1.23
RIPPLY3-201ENST00000329553 AMPD3Q01432 767 aa22.71■■□□□ 1.23
RIPPLY3-201ENST00000329553 LARP4BQ92615 738 aaKnown RBP22.71■■□□□ 1.23
RIPPLY3-201ENST00000329553 CCDC94Q9BW85 323 aaPredicted RBP22.71■■□□□ 1.23
RIPPLY3-201ENST00000329553 HOMER2Q9NSB8 354 aa22.71■■□□□ 1.23
RIPPLY3-201ENST00000329553 CTDP1Q9Y5B0 961 aaPredicted RBP22.71■■□□□ 1.23
RIPPLY3-201ENST00000329553 PARP14Q460N5 1801 aa22.71■■□□□ 1.23
RIPPLY3-201ENST00000329553 TNNT1P13805 278 aa22.7■■□□□ 1.23
RIPPLY3-201ENST00000329553 CCT6AP40227 531 aaKnown RBP22.7■■□□□ 1.23
RIPPLY3-201ENST00000329553 ARID5BQ14865 1188 aa22.7■■□□□ 1.23
RIPPLY3-201ENST00000329553 HSP90AA4PQ58FG1 418 aa22.7■■□□□ 1.23
RIPPLY3-201ENST00000329553 HYIQ5T013 277 aa22.7■■□□□ 1.23
RIPPLY3-201ENST00000329553 RAD54LQ92698 747 aa22.7■■□□□ 1.23
RIPPLY3-201ENST00000329553 EHMT1Q9H9B1 1298 aa22.7■■□□□ 1.23
RIPPLY3-201ENST00000329553 COL20A1Q9P218 1284 aa22.7■■□□□ 1.23
RIPPLY3-201ENST00000329553 PPP1R12BO60237 982 aaPredicted RBP22.7■■□□□ 1.22
RIPPLY3-201ENST00000329553 RHOBTB3O94955 611 aa22.7■■□□□ 1.22
RIPPLY3-201ENST00000329553 FDX1P10109 184 aa22.7■■□□□ 1.22
RIPPLY3-201ENST00000329553 ZNF18P17022 549 aa22.7■■□□□ 1.22
RIPPLY3-201ENST00000329553 USP50Q70EL3 339 aaPredicted RBP22.7■■□□□ 1.22
RIPPLY3-201ENST00000329553 MCF2L2Q86YR7 1114 aa22.7■■□□□ 1.22
RIPPLY3-201ENST00000329553 ZFP91Q96JP5 570 aaPredicted RBP22.7■■□□□ 1.22
RIPPLY3-201ENST00000329553 SAMSN1Q9NSI8 373 aaKnown RBP22.7■■□□□ 1.22
RIPPLY3-201ENST00000329553 RLFQ13129 1914 aa22.69■■□□□ 1.22
RIPPLY3-201ENST00000329553 EPHX2P34913 555 aa22.69■■□□□ 1.22
RIPPLY3-201ENST00000329553 GHRHRQ02643 423 aa22.69■■□□□ 1.22
RIPPLY3-201ENST00000329553 ANKRD7Q92527 254 aa22.69■■□□□ 1.22
RIPPLY3-201ENST00000329553 TMOD4Q9NZQ9 345 aa22.69■■□□□ 1.22
RIPPLY3-201ENST00000329553 MYMKA6NI61 221 aa22.69■■□□□ 1.22
RIPPLY3-201ENST00000329553 DSG3P32926 999 aa22.69■■□□□ 1.22
RIPPLY3-201ENST00000329553 PRCPP42785 496 aa22.69■■□□□ 1.22
RIPPLY3-201ENST00000329553 SPATA1Q5VX52 437 aa22.69■■□□□ 1.22
RIPPLY3-201ENST00000329553 CTNND2Q9UQB3 1225 aa22.69■■□□□ 1.22
RIPPLY3-201ENST00000329553 MAPK8IP1Q9UQF2 711 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms