RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 KDM3AQ9Y4C1 1321 aa13.05□□□□□ -0.32
DDR1-223ENST00000324771 TCP11X2Q5H9J9 407 aa13.05□□□□□ -0.32
DDR1-223ENST00000324771 SLFN12Q8IYM2 578 aa13.05□□□□□ -0.32
DDR1-223ENST00000324771 SELENOOQ9BVL4 669 aa13.05□□□□□ -0.32
DDR1-223ENST00000324771 RAVER2Q9HCJ3 691 aaKnown RBP13.05□□□□□ -0.32
DDR1-223ENST00000324771 LRRC4BQ9NT99 713 aa13.05□□□□□ -0.32
DDR1-223ENST00000324771 CTTNBP2NLQ9P2B4 639 aa13.05□□□□□ -0.32
DDR1-223ENST00000324771 SAR1BQ9Y6B6 198 aa13.05□□□□□ -0.32
DDR1-223ENST00000324771 PIK3C2AO00443 1686 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 ZEB2O60315 1214 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 TNNI1P19237 187 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 ARHGAP4P98171 946 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 PTPAQ15257 358 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 IFI16Q16666 785 aaKnown RBP13.04□□□□□ -0.32
DDR1-223ENST00000324771 AK8Q96MA6 479 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 NOX5Q96PH1 765 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 RGL1Q9NZL6 768 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 NPHP3-ACAD11A0A0J9YXS1 232 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 SPOPO43791 374 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 FKBP3Q00688 224 aaKnown RBP13.04□□□□□ -0.32
DDR1-223ENST00000324771 EZH2Q15910 746 aaKnown RBP13.04□□□□□ -0.32
DDR1-223ENST00000324771 SEPT7Q16181 437 aaKnown RBP13.04□□□□□ -0.32
DDR1-223ENST00000324771 SARM1Q6SZW1 724 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 PPM1KQ8N3J5 372 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 TUBB4AP04350 444 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 CDC25BP30305 580 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 RWDD2AQ9UIY3 292 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 COL4A3BPQ9Y5P4 624 aa13.04□□□□□ -0.32
DDR1-223ENST00000324771 GOLGA8IPA6NC78 632 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 GOLGA8JA6NMD2 632 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 FOSP01100 380 aaPredicted RBP13.03□□□□□ -0.32
DDR1-223ENST00000324771 MCM3P25205 808 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 SEC23AQ15436 765 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
DDR1-223ENST00000324771 VTI1AQ96AJ9 217 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 IFT74Q96LB3 600 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 TEKT3Q9BXF9 490 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 DLG5Q8TDM6 1919 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 PDHBP11177 359 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 CAPN2P17655 700 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 RDXP35241 583 aaKnown RBP13.03□□□□□ -0.32
DDR1-223ENST00000324771 EHHADHQ08426 723 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 DALRD3Q5D0E6 543 aaKnown RBP13.03□□□□□ -0.32
DDR1-223ENST00000324771 C8orf74Q6P047 294 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 PHLDB2Q86SQ0 1253 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 LARSQ9P2J5 1176 aaKnown RBP13.03□□□□□ -0.32
DDR1-223ENST00000324771 USTQ9Y2C2 406 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 LAD1O00515 517 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 STK4Q13043 487 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 SBK1Q52WX2 424 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 SLC10A5Q5PT55 438 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 SEPT14Q6ZU15 432 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 USP37Q86T82 979 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 METTL13Q8N6R0 699 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 FAM133AQ8N9E0 248 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 DHTKD1Q96HY7 919 aaPredicted RBP13.03□□□□□ -0.32
DDR1-223ENST00000324771 ZNF668Q96K58 619 aaPredicted RBP13.03□□□□□ -0.32
DDR1-223ENST00000324771 PPP1R16BQ96T49 567 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 NDUFB10O96000 172 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 IGBP1P78318 339 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 TTC16Q8NEE8 873 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 AGXT2Q9BYV1 514 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 TAOK3Q9H2K8 898 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 NDST4Q9H3R1 872 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 ADAMTS1Q9UHI8 967 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 CSADQ9Y600 493 aa13.03□□□□□ -0.32
DDR1-223ENST00000324771 HSF2BPO75031 334 aa13.02□□□□□ -0.32
DDR1-223ENST00000324771 KIAA0754O94854 1291 aa13.02□□□□□ -0.32
DDR1-223ENST00000324771 VAV2P52735 878 aa13.02□□□□□ -0.32
DDR1-223ENST00000324771 EXOC3L4Q17RC7 722 aa13.02□□□□□ -0.32
DDR1-223ENST00000324771 BANK1Q8NDB2 785 aa13.02□□□□□ -0.32
DDR1-223ENST00000324771 TMEM39BQ9GZU3 492 aa13.02□□□□□ -0.32
DDR1-223ENST00000324771 FBXO28Q9NVF7 368 aa13.02□□□□□ -0.32
DDR1-223ENST00000324771 GPR75-ASB3A0A0A6YYF3 556 aa13.02□□□□□ -0.33
DDR1-223ENST00000324771 LRRIQ4A6NIV6 560 aa13.02□□□□□ -0.33
DDR1-223ENST00000324771 SRGAP2O75044 1071 aa13.02□□□□□ -0.33
DDR1-223ENST00000324771 KRT19P08727 400 aa13.02□□□□□ -0.33
DDR1-223ENST00000324771 EIF4A3P38919 411 aaKnown RBP13.02□□□□□ -0.33
DDR1-223ENST00000324771 STAT1P42224 750 aa13.02□□□□□ -0.33
DDR1-223ENST00000324771 SND1Q7KZF4 910 aaKnown RBP eCLIP13.02□□□□□ -0.33
DDR1-223ENST00000324771 PCDHAC2Q9Y5I4 1007 aa13.02□□□□□ -0.33
DDR1-223ENST00000324771 DDR1Q08345 913 aa13.02□□□□□ -0.33
DDR1-223ENST00000324771 ZNF543Q08ER8 600 aa13.02□□□□□ -0.33
DDR1-223ENST00000324771 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.33
DDR1-223ENST00000324771 MRRFQ96E11 262 aaKnown RBP13.02□□□□□ -0.33
DDR1-223ENST00000324771 PRMT6Q96LA8 375 aaPredicted RBP13.02□□□□□ -0.33
DDR1-223ENST00000324771 PIM2Q9P1W9 311 aa13.02□□□□□ -0.33
DDR1-223ENST00000324771 RSPH14Q9UHP6 348 aa13.02□□□□□ -0.33
DDR1-223ENST00000324771 ZHX2Q9Y6X8 837 aa13.02□□□□□ -0.33
DDR1-223ENST00000324771 FAM205AQ6ZU69 1335 aa13.02□□□□□ -0.33
DDR1-223ENST00000324771 NWD1Q149M9 1564 aa13.01□□□□□ -0.33
DDR1-223ENST00000324771 NRXN3Q9Y4C0 1643 aa13.01□□□□□ -0.33
DDR1-223ENST00000324771 GOLGA6L10A0A0M3HER8 536 aa13.01□□□□□ -0.33
DDR1-223ENST00000324771 TTC26A0AVF1 554 aa13.01□□□□□ -0.33
DDR1-223ENST00000324771 KCNK3O14649 394 aa13.01□□□□□ -0.33
DDR1-223ENST00000324771 CD19P15391 556 aa13.01□□□□□ -0.33
DDR1-223ENST00000324771 KRT26Q7Z3Y9 468 aa13.01□□□□□ -0.33
DDR1-223ENST00000324771 SULF1Q8IWU6 871 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms