RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 VCAM1P19320 739 aa10.22□□□□□ -0.77
CD46-202ENST00000322918 NELFBQ8WX92 580 aa10.22□□□□□ -0.77
CD46-202ENST00000322918 GSDMAQ96QA5 445 aa10.22□□□□□ -0.77
CD46-202ENST00000322918 SH2D3AQ9BRG2 576 aa10.22□□□□□ -0.77
CD46-202ENST00000322918 BMP2KQ9NSY1 1161 aaPredicted RBP10.22□□□□□ -0.77
CD46-202ENST00000322918 GCOM1H8Y6P7 765 aaPredicted RBP10.22□□□□□ -0.77
CD46-202ENST00000322918 POLR2MP0CAP2 368 aa10.22□□□□□ -0.77
CD46-202ENST00000322918 MYCLP12524 364 aaPredicted RBP10.22□□□□□ -0.77
CD46-202ENST00000322918 PMS1P54277 932 aaKnown RBP10.22□□□□□ -0.77
CD46-202ENST00000322918 SP4Q02446 784 aa10.22□□□□□ -0.77
CD46-202ENST00000322918 STK4Q13043 487 aa10.22□□□□□ -0.77
CD46-202ENST00000322918 GLIS3Q8NEA6 775 aa10.22□□□□□ -0.77
CD46-202ENST00000322918 ATG4CQ96DT6 458 aa10.22□□□□□ -0.77
CD46-202ENST00000322918 RAB34Q9BZG1 259 aa10.22□□□□□ -0.77
CD46-202ENST00000322918 RGL1Q9NZL6 768 aa10.22□□□□□ -0.77
CD46-202ENST00000322918 DACH1Q9UI36 760 aa10.22□□□□□ -0.77
CD46-202ENST00000322918 PPP1R3GB7ZBB8 358 aa10.21□□□□□ -0.77
CD46-202ENST00000322918 LAD1O00515 517 aa10.21□□□□□ -0.77
CD46-202ENST00000322918 ZBTB39O15060 712 aa10.21□□□□□ -0.77
CD46-202ENST00000322918 TEX33O43247 280 aa10.21□□□□□ -0.77
CD46-202ENST00000322918 KRT18P05783 430 aaKnown RBP10.21□□□□□ -0.77
CD46-202ENST00000322918 EIF2AK2P19525 551 aaKnown RBP10.21□□□□□ -0.77
CD46-202ENST00000322918 PABPC4Q13310 644 aaKnown RBP eCLIP10.21□□□□□ -0.77
CD46-202ENST00000322918 MUM1L1Q5H9M0 696 aa10.21□□□□□ -0.77
CD46-202ENST00000322918 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.77
CD46-202ENST00000322918 SV2BQ7L1I2 683 aa10.21□□□□□ -0.77
CD46-202ENST00000322918 IGSF22Q8N9C0 903 aa10.21□□□□□ -0.77
CD46-202ENST00000322918 PNMA5Q96PV4 448 aa10.21□□□□□ -0.77
CD46-202ENST00000322918 SLF1Q9BQI6 1058 aa10.21□□□□□ -0.77
CD46-202ENST00000322918 EMILIN3Q9NT22 766 aa10.21□□□□□ -0.77
CD46-202ENST00000322918 EXOC1Q9NV70 894 aa10.21□□□□□ -0.77
CD46-202ENST00000322918 MYMKA6NI61 221 aa10.21□□□□□ -0.78
CD46-202ENST00000322918 IKBKBO14920 756 aa10.21□□□□□ -0.78
CD46-202ENST00000322918 TBC1D12O60347 775 aa10.21□□□□□ -0.78
CD46-202ENST00000322918 PRPHP41219 470 aa10.21□□□□□ -0.78
CD46-202ENST00000322918 PSMC6P62333 389 aa10.21□□□□□ -0.78
CD46-202ENST00000322918 GPC2Q8N158 579 aa10.21□□□□□ -0.78
CD46-202ENST00000322918 PIGOQ8TEQ8 1089 aa10.21□□□□□ -0.78
CD46-202ENST00000322918 ZNF592Q92610 1267 aa10.21□□□□□ -0.78
CD46-202ENST00000322918 LARP4BQ92615 738 aaKnown RBP10.21□□□□□ -0.78
CD46-202ENST00000322918 C16orf45Q96MC5 204 aaPredicted RBP10.21□□□□□ -0.78
CD46-202ENST00000322918 CCSER1Q9C0I3 900 aa10.21□□□□□ -0.78
CD46-202ENST00000322918 CGNQ9P2M7 1197 aaKnown RBP10.21□□□□□ -0.78
CD46-202ENST00000322918 ZNF646O15015 1829 aaPredicted RBP10.2□□□□□ -0.78
CD46-202ENST00000322918 CTNND1O60716 968 aaKnown RBP10.2□□□□□ -0.78
CD46-202ENST00000322918 SKILP12757 684 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 ADKP55263 362 aaKnown RBP10.2□□□□□ -0.78
CD46-202ENST00000322918 MKRN3Q13064 507 aaKnown RBP10.2□□□□□ -0.78
CD46-202ENST00000322918 NOLC1Q14978 699 aaKnown RBP eCLIP10.2□□□□□ -0.782e-8■■■□□ 18.1
CD46-202ENST00000322918 NT5DC1Q5TFE4 455 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 MAEAQ7L5Y9 396 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 PRPF38AQ8NAV1 312 aaKnown RBP10.2□□□□□ -0.78
CD46-202ENST00000322918 MRFAP1L1Q96HT8 127 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 TRIM47Q96LD4 638 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 TRIM9Q9C026 710 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 BCAS3Q9H6U6 928 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 BLOC1S4Q9NUP1 217 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 TAB2Q9NYJ8 693 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 PAK1Q13153 545 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 CTTNQ14247 550 aaKnown RBP10.2□□□□□ -0.78
CD46-202ENST00000322918 DCAF15Q66K64 600 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 PPP4R3AQ6IN85 833 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 SARM1Q6SZW1 724 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 KRT26Q7Z3Y9 468 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 SULF1Q8IWU6 871 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 IL31RAQ8NI17 732 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 SPATA20Q8TB22 786 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 FEM1BQ9UK73 627 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 RIPK3Q9Y572 518 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 SFI1A8K8P3 1242 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 MSH4O15457 936 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 MED24O75448 989 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 PTPRAP18433 802 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 BTNL9Q6UXG8 535 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 LRRC8AQ8IWT6 810 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 TPH2Q8IWU9 490 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 NELFCDQ8IXH7 590 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 DDX12PQ92771 950 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 DCPSQ96C86 337 aaKnown RBP10.2□□□□□ -0.78
CD46-202ENST00000322918 AK8Q96MA6 479 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 BPIFA3Q9BQP9 254 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 COL20A1Q9P218 1284 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 SAMM50Q9Y512 469 aa10.2□□□□□ -0.78
CD46-202ENST00000322918 ARP10275 920 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 ZNF658Q5TYW1 1059 aaPredicted RBP10.19□□□□□ -0.78
CD46-202ENST00000322918 ZNF280CQ8ND82 737 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 CLMNQ96JQ2 1002 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 PRIMPOLQ96LW4 560 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 WDR18Q9BV38 432 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 SRRTQ9BXP5 876 aaKnown RBP10.19□□□□□ -0.78
CD46-202ENST00000322918 INTS13Q9NVM9 706 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 KBTBD4Q9NVX7 518 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 CLEC11AQ9Y240 323 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 MRPL11Q9Y3B7 192 aaKnown RBP10.19□□□□□ -0.78
CD46-202ENST00000322918 FER1L6Q2WGJ9 1857 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 USP27XA6NNY8 438 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 SCYL3Q8IZE3 742 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 TRIML1Q8N9V2 468 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 ENOX1Q8TC92 643 aaKnown RBP10.19□□□□□ -0.78
CD46-202ENST00000322918 OTUD5Q96G74 571 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms