RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 SLFN13Q68D06 897 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 GSPT2Q8IYD1 628 aaKnown RBP16.9■□□□□ 0.3
GCFC2-201ENST00000321027 NDST4Q9H3R1 872 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 MRFAP1Q9Y605 127 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 A6NNZ2 444 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 GNA14O95837 355 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 H2AFZP0C0S5 128 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 SETDB1Q15047 1291 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 TUBB8Q3ZCM7 444 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 SPATA31A1Q5TZJ5 1347 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 H2AFVQ71UI9 128 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 APBB1IPQ7Z5R6 666 aaPredicted RBP16.9■□□□□ 0.3
GCFC2-201ENST00000321027 LAD1O00515 517 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 NSMFQ6X4W1 530 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 ZNF365Q70YC5 407 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 CCDC105Q8IYK2 499 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 ASIC3Q9UHC3 531 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 AMFRQ9UKV5 643 aa16.9■□□□□ 0.3
GCFC2-201ENST00000321027 NR2F2P24468 414 aa16.89■□□□□ 0.29
GCFC2-201ENST00000321027 KIF11P52732 1056 aa16.89■□□□□ 0.29
GCFC2-201ENST00000321027 PRKG1Q13976 671 aa16.89■□□□□ 0.29
GCFC2-201ENST00000321027 SH3RF3Q8TEJ3 882 aaPredicted RBP16.89■□□□□ 0.29
GCFC2-201ENST00000321027 SREK1Q8WXA9 508 aaKnown RBP16.89■□□□□ 0.29
GCFC2-201ENST00000321027 TMC4Q7Z404 712 aa16.89■□□□□ 0.29
GCFC2-201ENST00000321027 PNMA8AQ86V59 439 aaPredicted RBP16.89■□□□□ 0.29
GCFC2-201ENST00000321027 THAP9Q9H5L6 903 aa16.89■□□□□ 0.29
GCFC2-201ENST00000321027 JRKLQ9Y4A0 524 aa16.89■□□□□ 0.29
GCFC2-201ENST00000321027 KDM3AQ9Y4C1 1321 aa16.89■□□□□ 0.29
GCFC2-201ENST00000321027 CCDC160A6NGH7 325 aa16.89■□□□□ 0.29
GCFC2-201ENST00000321027 RBM43Q6ZSC3 357 aaKnown RBP16.89■□□□□ 0.29
GCFC2-201ENST00000321027 KCTD1Q719H9 257 aa16.89■□□□□ 0.29
GCFC2-201ENST00000321027 DCP1AQ9NPI6 582 aaPredicted RBP16.89■□□□□ 0.29
GCFC2-201ENST00000321027 LGALS16A8MUM7 142 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 NFIXQ14938 502 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 UBL4BQ8N7F7 174 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 TC2NQ8N9U0 490 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 MAGEF1Q9HAY2 307 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 ADAMTS1Q9UHI8 967 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.88■□□□□ 0.29
GCFC2-201ENST00000321027 MYO5BQ9ULV0 1848 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 CLRN2A0PK11 232 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 GOLGA8KD6RF30 607 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 EXOC3L4Q17RC7 722 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 WDR44Q5JSH3 913 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 CCDC170Q8IYT3 715 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 FAM133AQ8N9E0 248 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 CHP1Q99653 195 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 MST1RQ04912 1400 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 ARHGAP23Q9P227 1491 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 MYCLP12524 364 aaPredicted RBP16.88■□□□□ 0.29
GCFC2-201ENST00000321027 FXR1P51114 621 aaKnown RBP eCLIP16.88■□□□□ 0.29
GCFC2-201ENST00000321027 PFKFB3Q16875 520 aaPredicted RBP16.88■□□□□ 0.29
GCFC2-201ENST00000321027 SYCE1Q8N0S2 351 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 SPICE1Q8N0Z3 855 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 CD209Q9NNX6 404 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 PICK1Q9NRD5 415 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 SLIT1O75093 1534 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 LLGL1Q15334 1064 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 UBE2SQ16763 222 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 INTS8Q75QN2 995 aaKnown RBP16.88■□□□□ 0.29
GCFC2-201ENST00000321027 PCDHA13Q9Y5I0 950 aa16.88■□□□□ 0.29
GCFC2-201ENST00000321027 KDM6AO15550 1401 aaPredicted RBP16.88■□□□□ 0.29
GCFC2-201ENST00000321027 CDK8P49336 464 aa16.87■□□□□ 0.29
GCFC2-201ENST00000321027 FMNL3Q8IVF7 1028 aa16.87■□□□□ 0.29
GCFC2-201ENST00000321027 EPB41L4AQ9HCS5 686 aaPredicted RBP16.87■□□□□ 0.29
GCFC2-201ENST00000321027 MEIS1O00470 390 aa16.87■□□□□ 0.29
GCFC2-201ENST00000321027 ARHGAP25P42331 645 aa16.87■□□□□ 0.29
GCFC2-201ENST00000321027 GJD4Q96KN9 370 aaPredicted RBP16.87■□□□□ 0.29
GCFC2-201ENST00000321027 CCDC17Q96LX7 622 aa16.87■□□□□ 0.29
GCFC2-201ENST00000321027 STIM2Q9P246 746 aa16.87■□□□□ 0.29
GCFC2-201ENST00000321027 GINS2Q9Y248 185 aa16.87■□□□□ 0.29
GCFC2-201ENST00000321027 RAD9BQ6WBX8 426 aa16.87■□□□□ 0.29
GCFC2-201ENST00000321027 DGKHQ86XP1 1220 aa16.87■□□□□ 0.29
GCFC2-201ENST00000321027 ATP2A2P16615 1042 aaKnown RBP16.86■□□□□ 0.29
GCFC2-201ENST00000321027 SMTNP53814 917 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 ABCB5Q2M3G0 1257 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 MGARPQ8TDB4 240 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 MAP3K9P80192 1104 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 BCS1LQ9Y276 419 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 GAS7O60861 476 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 TTLL1O95922 423 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 VPS41P49754 854 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 VSNL1P62760 191 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 FBXO11Q86XK2 927 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 CHURC1Q8WUH1 139 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 CSRNP1Q96S65 589 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 FAM169AQ9Y6X4 670 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 POTEMA6NI47 508 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 MYL1P05976 194 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 EPHB4P54760 987 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 TXNRD1Q16881 649 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 SRBD1Q8N5C6 995 aaKnown RBP16.86■□□□□ 0.29
GCFC2-201ENST00000321027 MSANTD4Q8NCY6 345 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 KIFAP3Q92845 792 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 AGTPBP1Q9UPW5 1226 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 COL4A3BPQ9Y5P4 624 aa16.86■□□□□ 0.29
GCFC2-201ENST00000321027 SIGLEC1Q9BZZ2 1709 aa16.85■□□□□ 0.29
GCFC2-201ENST00000321027 KRT26Q7Z3Y9 468 aa16.85■□□□□ 0.29
GCFC2-201ENST00000321027 USTQ9Y2C2 406 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms