RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 IDEP14735 1019 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.07■■□□□ 1.28
CPNE7-202ENST00000319518 NEK8Q86SG6 692 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 BLOC1S4Q9NUP1 217 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 USP40Q9NVE5 1235 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 SIK3Q9Y2K2 1263 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 CAPN6Q9Y6Q1 641 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 RPS6KA5O75582 802 aa23.06■■□□□ 1.28
CPNE7-202ENST00000319518 TNNT3P45378 269 aaPredicted RBP23.06■■□□□ 1.28
CPNE7-202ENST00000319518 C2orf54Q08AI8 447 aa23.06■■□□□ 1.28
CPNE7-202ENST00000319518 COBLL1Q53SF7 1204 aa23.06■■□□□ 1.28
CPNE7-202ENST00000319518 ZNF772Q68DY9 489 aaPredicted RBP23.06■■□□□ 1.28
CPNE7-202ENST00000319518 CENPPQ6IPU0 288 aa23.06■■□□□ 1.28
CPNE7-202ENST00000319518 TBCKQ8TEA7 893 aa23.06■■□□□ 1.28
CPNE7-202ENST00000319518 COG1Q8WTW3 980 aa23.06■■□□□ 1.28
CPNE7-202ENST00000319518 RPGRIP1Q96KN7 1286 aa23.06■■□□□ 1.28
CPNE7-202ENST00000319518 PLAGL2Q9UPG8 496 aa23.06■■□□□ 1.28
CPNE7-202ENST00000319518 HNRNPH3P31942 346 aaKnown RBP23.06■■□□□ 1.28
CPNE7-202ENST00000319518 NT5C2P49902 561 aa23.06■■□□□ 1.28
CPNE7-202ENST00000319518 CKAP4Q07065 602 aaKnown RBP23.06■■□□□ 1.28
CPNE7-202ENST00000319518 GRB10Q13322 594 aa23.06■■□□□ 1.28
CPNE7-202ENST00000319518 CREG2Q8IUH2 290 aa23.06■■□□□ 1.28
CPNE7-202ENST00000319518 FAM114A1Q8IWE2 563 aa23.06■■□□□ 1.28
CPNE7-202ENST00000319518 USP17L5A8MUK1 530 aa23.05■■□□□ 1.28
CPNE7-202ENST00000319518 EDIL3O43854 480 aa23.05■■□□□ 1.28
CPNE7-202ENST00000319518 AKR1B1P15121 316 aa23.05■■□□□ 1.28
CPNE7-202ENST00000319518 C2CD5Q86YS7 1000 aa23.05■■□□□ 1.28
CPNE7-202ENST00000319518 SECISBP2LQ93073 1101 aaKnown RBP23.05■■□□□ 1.28
CPNE7-202ENST00000319518 HINFPQ9BQA5 517 aa23.05■■□□□ 1.28
CPNE7-202ENST00000319518 UBA5Q9GZZ9 404 aa23.05■■□□□ 1.28
CPNE7-202ENST00000319518 JADE2Q9NQC1 790 aa23.05■■□□□ 1.28
CPNE7-202ENST00000319518 FRMPD2Q68DX3 1309 aaPredicted RBP23.05■■□□□ 1.28
CPNE7-202ENST00000319518 MYMKA6NI61 221 aa23.04■■□□□ 1.28
CPNE7-202ENST00000319518 TRIM66O15016 1216 aa23.04■■□□□ 1.28
CPNE7-202ENST00000319518 IPO7O95373 1038 aaKnown RBP23.04■■□□□ 1.28
CPNE7-202ENST00000319518 CHRNA5P30532 468 aa23.04■■□□□ 1.28
CPNE7-202ENST00000319518 LEKR1Q6ZMV7 388 aa23.04■■□□□ 1.28
CPNE7-202ENST00000319518 GPIHBP1Q8IV16 184 aa23.04■■□□□ 1.28
CPNE7-202ENST00000319518 LRRC47Q8N1G4 583 aaKnown RBP23.04■■□□□ 1.28
CPNE7-202ENST00000319518 LZTS2Q9BRK4 669 aa23.04■■□□□ 1.28
CPNE7-202ENST00000319518 MLXIPQ9HAP2 919 aa23.04■■□□□ 1.28
CPNE7-202ENST00000319518 TMEM260Q9NX78 707 aa23.04■■□□□ 1.28
CPNE7-202ENST00000319518 AGPSO00116 658 aa23.04■■□□□ 1.28
CPNE7-202ENST00000319518 CACNB3P54284 484 aa23.04■■□□□ 1.28
CPNE7-202ENST00000319518 KIF5AQ12840 1032 aa23.04■■□□□ 1.28
CPNE7-202ENST00000319518 EZH2Q15910 746 aaKnown RBP23.04■■□□□ 1.28
CPNE7-202ENST00000319518 CCNI2Q6ZMN8 369 aaPredicted RBP23.04■■□□□ 1.28
CPNE7-202ENST00000319518 CCDC42Q96M95 316 aa23.04■■□□□ 1.28
CPNE7-202ENST00000319518 BIN2Q9UBW5 565 aaPredicted RBP23.04■■□□□ 1.28
CPNE7-202ENST00000319518 MYO1CO00159 1063 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 NFIAQ12857 509 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 CDC42EP5Q6NZY7 148 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 CNNM4Q6P4Q7 775 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 LRRC31Q6UY01 552 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 SRLQ86TD4 932 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 CAGE1Q8TC20 777 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 CCDC47Q96A33 483 aaKnown RBP23.03■■□□□ 1.28
CPNE7-202ENST00000319518 ZFP91Q96JP5 570 aaPredicted RBP23.03■■□□□ 1.28
CPNE7-202ENST00000319518 PNMA5Q96PV4 448 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 PIGSQ96S52 555 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 ACBD3Q9H3P7 528 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 FAM207AQ9NSI2 230 aaPredicted RBP23.03■■□□□ 1.28
CPNE7-202ENST00000319518 CWC15Q9P013 229 aaKnown RBP23.03■■□□□ 1.28
CPNE7-202ENST00000319518 SNX12Q9UMY4 172 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 MAP9Q49MG5 647 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 VWA3BQ502W6 1294 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 ZFPM1Q8IX07 1006 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 HDAC7Q8WUI4 952 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 MTMR9Q96QG7 549 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 SELENOOQ9BVL4 669 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 SH2D4AQ9H788 454 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 C6orf50Q9HD87 102 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 FOCADQ5VW36 1801 aa23.03■■□□□ 1.28
CPNE7-202ENST00000319518 MCM3P25205 808 aa23.02■■□□□ 1.28
CPNE7-202ENST00000319518 TXKP42681 527 aa23.02■■□□□ 1.28
CPNE7-202ENST00000319518 GABPAQ06546 454 aa23.02■■□□□ 1.28
CPNE7-202ENST00000319518 CCDC96Q2M329 555 aa23.02■■□□□ 1.28
CPNE7-202ENST00000319518 FKBP15Q5T1M5 1219 aa23.02■■□□□ 1.28
CPNE7-202ENST00000319518 KIAA0825Q8IV33 1275 aa23.02■■□□□ 1.28
CPNE7-202ENST00000319518 NDST4Q9H3R1 872 aa23.02■■□□□ 1.28
CPNE7-202ENST00000319518 PCDHA13Q9Y5I0 950 aa23.02■■□□□ 1.28
CPNE7-202ENST00000319518 GGCXP38435 758 aa23.02■■□□□ 1.28
CPNE7-202ENST00000319518 AMPD3Q01432 767 aa23.02■■□□□ 1.28
CPNE7-202ENST00000319518 APOBEC3HQ6NTF7 200 aaKnown RBP23.02■■□□□ 1.28
CPNE7-202ENST00000319518 IFIH1Q9BYX4 1025 aaKnown RBP23.02■■□□□ 1.28
CPNE7-202ENST00000319518 TMX4Q9H1E5 349 aaPredicted RBP23.02■■□□□ 1.28
CPNE7-202ENST00000319518 SALL4Q9UJQ4 1053 aa23.02■■□□□ 1.28
CPNE7-202ENST00000319518 SLC37A4O43826 429 aa23.01■■□□□ 1.27
CPNE7-202ENST00000319518 MOCS3O95396 460 aa23.01■■□□□ 1.27
CPNE7-202ENST00000319518 ERCC3P19447 782 aa23.01■■□□□ 1.27
CPNE7-202ENST00000319518 GNA11P29992 359 aa23.01■■□□□ 1.27
CPNE7-202ENST00000319518 KIF11P52732 1056 aa23.01■■□□□ 1.27
CPNE7-202ENST00000319518 GLIS3Q8NEA6 775 aa23.01■■□□□ 1.27
CPNE7-202ENST00000319518 RRP15Q9Y3B9 282 aaKnown RBP23.01■■□□□ 1.27
CPNE7-202ENST00000319518 JRKLQ9Y4A0 524 aa23.01■■□□□ 1.27
CPNE7-202ENST00000319518 EIF4A3P38919 411 aaKnown RBP23.01■■□□□ 1.27
CPNE7-202ENST00000319518 PPP1R2P41236 205 aa23.01■■□□□ 1.27
CPNE7-202ENST00000319518 SLC20A2Q08357 652 aa23.01■■□□□ 1.27
CPNE7-202ENST00000319518 SPA17Q15506 151 aa23.01■■□□□ 1.27
CPNE7-202ENST00000319518 DYMQ7RTS9 669 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms