RNA–Protein interactions for RNA: ENST00000319466.8

MCFD2-201, Transcript of multiple coagulation factor deficiency 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCFD2, Length 4,182 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-201ENST00000319466 PANK4Q9NVE7 773 aa17.31■□□□□ 0.36
MCFD2-201ENST00000319466 COL16A1Q07092 1604 aaPredicted RBP17.31■□□□□ 0.36
MCFD2-201ENST00000319466 N4BP1O75113 896 aaKnown RBP17.31■□□□□ 0.36
MCFD2-201ENST00000319466 MOCS3O95396 460 aa17.31■□□□□ 0.36
MCFD2-201ENST00000319466 UNC13DQ70J99 1090 aa17.31■□□□□ 0.36
MCFD2-201ENST00000319466 MEIS1O00470 390 aa17.31■□□□□ 0.36
MCFD2-201ENST00000319466 NFIAQ12857 509 aa17.31■□□□□ 0.36
MCFD2-201ENST00000319466 DNAJC7Q99615 494 aa17.31■□□□□ 0.36
MCFD2-201ENST00000319466 PNMA6FA0A0J9YX94 578 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 NPHP3-ACAD11A0A0J9YXS1 232 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 RCCD1A6NED2 376 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 C2orf54Q08AI8 447 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 FAM26FQ5R3K3 315 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 TEKT1Q969V4 418 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 ATP8B1O43520 1251 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 STAT3P40763 770 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 PRR16Q569H4 304 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 TRMT1LQ7Z2T5 733 aaKnown RBP17.3■□□□□ 0.36
MCFD2-201ENST00000319466 GPBP1Q86WP2 473 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 GJD4Q96KN9 370 aaPredicted RBP17.3■□□□□ 0.36
MCFD2-201ENST00000319466 BLOC1S4Q9NUP1 217 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 GDF11O95390 407 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 PPP1R2P41236 205 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 CKAP4Q07065 602 aaKnown RBP17.3■□□□□ 0.36
MCFD2-201ENST00000319466 RAPGEF1Q13905 1077 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 CASP8Q14790 479 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 PTPROQ16827 1216 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 RAD54LQ92698 747 aa17.3■□□□□ 0.36
MCFD2-201ENST00000319466 ARAP2Q8WZ64 1704 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 LRRC53A6NM62 1247 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 IL1R1P14778 569 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 RASSF7Q02833 373 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 PNMA5Q96PV4 448 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 ALS2CR12Q96Q35 445 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 STK17AQ9UEE5 414 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 FAN1Q9Y2M0 1017 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 POTEB3A0JP26 581 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 POTECB2RU33 542 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 CAPN2P17655 700 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 CYP4A11Q02928 519 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 MAN2A1Q16706 1144 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 POTEBQ6S5H4 581 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 H3BQF6 201 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 EPHB6O15197 1021 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 KIF11P52732 1056 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 ZNF543Q08ER8 600 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 CCDC84Q86UT8 332 aaPredicted RBP17.29■□□□□ 0.36
MCFD2-201ENST00000319466 RETREG2Q8NC44 543 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 MYH8P13535 1937 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 POLR2FP61218 127 aaKnown RBP17.29■□□□□ 0.36
MCFD2-201ENST00000319466 BEND6Q5SZJ8 279 aaPredicted RBP17.29■□□□□ 0.36
MCFD2-201ENST00000319466 SPICE1Q8N0Z3 855 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 LRRC27Q9C0I9 530 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 RIOX1Q9H6W3 641 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 ADAM21Q9UKJ8 722 aa17.29■□□□□ 0.36
MCFD2-201ENST00000319466 SHROOM1Q2M3G4 852 aaPredicted RBP17.28■□□□□ 0.36
MCFD2-201ENST00000319466 LEKR1Q6ZMV7 388 aa17.28■□□□□ 0.36
MCFD2-201ENST00000319466 SMARCAL1Q9NZC9 954 aa17.28■□□□□ 0.36
MCFD2-201ENST00000319466 TAL1P17542 331 aaPredicted RBP17.28■□□□□ 0.36
MCFD2-201ENST00000319466 CCDC65Q8IXS2 484 aa17.28■□□□□ 0.36
MCFD2-201ENST00000319466 LSM14BQ9BX40 385 aaKnown RBP17.28■□□□□ 0.36
MCFD2-201ENST00000319466 CALCOCO1Q9P1Z2 691 aa17.28■□□□□ 0.36
MCFD2-201ENST00000319466 PCDHA13Q9Y5I0 950 aa17.28■□□□□ 0.36
MCFD2-201ENST00000319466 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.28■□□□□ 0.36
MCFD2-201ENST00000319466 PLCH1Q4KWH8 1693 aa17.28■□□□□ 0.36
MCFD2-201ENST00000319466 DDR1Q08345 913 aa17.28■□□□□ 0.36
MCFD2-201ENST00000319466 MAP9Q49MG5 647 aa17.28■□□□□ 0.36
MCFD2-201ENST00000319466 SLFN13Q68D06 897 aa17.28■□□□□ 0.36
MCFD2-201ENST00000319466 TMC4Q7Z404 712 aa17.28■□□□□ 0.36
MCFD2-201ENST00000319466 GFPT1Q06210 699 aaPredicted RBP17.27■□□□□ 0.36
MCFD2-201ENST00000319466 PABPC4Q13310 644 aaKnown RBP eCLIP17.27■□□□□ 0.362e-6■■■□□ 17.5
MCFD2-201ENST00000319466 PCDHAC2Q9Y5I4 1007 aa17.27■□□□□ 0.36
MCFD2-201ENST00000319466 ZBTB5O15062 677 aa17.27■□□□□ 0.36
MCFD2-201ENST00000319466 PAFAH1B1P43034 410 aa17.27■□□□□ 0.36
MCFD2-201ENST00000319466 VAV2P52735 878 aa17.27■□□□□ 0.36
MCFD2-201ENST00000319466 COASYQ13057 564 aa17.27■□□□□ 0.36
MCFD2-201ENST00000319466 ZFPM1Q8IX07 1006 aa17.27■□□□□ 0.36
MCFD2-201ENST00000319466 CCDC170Q8IYT3 715 aa17.27■□□□□ 0.36
MCFD2-201ENST00000319466 KCNQ5Q9NR82 932 aa17.27■□□□□ 0.36
MCFD2-201ENST00000319466 HNRNPH2P55795 449 aaKnown RBP17.27■□□□□ 0.35
MCFD2-201ENST00000319466 CERKLQ49MI3 558 aaPredicted RBP17.27■□□□□ 0.35
MCFD2-201ENST00000319466 DCAF17Q5H9S7 520 aaPredicted RBP17.27■□□□□ 0.35
MCFD2-201ENST00000319466 MIIPQ5JXC2 388 aa17.27■□□□□ 0.35
MCFD2-201ENST00000319466 CDC42EP5Q6NZY7 148 aa17.27■□□□□ 0.35
MCFD2-201ENST00000319466 CERS5Q8N5B7 392 aa17.27■□□□□ 0.35
MCFD2-201ENST00000319466 COA1Q9GZY4 146 aa17.27■□□□□ 0.35
MCFD2-201ENST00000319466 SPDYE3A6NKU9 549 aa17.26■□□□□ 0.35
MCFD2-201ENST00000319466 NCK2O43639 380 aa17.26■□□□□ 0.35
MCFD2-201ENST00000319466 APBA1Q02410 837 aa17.26■□□□□ 0.35
MCFD2-201ENST00000319466 IQCEQ6IPM2 695 aa17.26■□□□□ 0.35
MCFD2-201ENST00000319466 PHLPP1O60346 1717 aa17.26■□□□□ 0.35
MCFD2-201ENST00000319466 EIF3CLB5ME19 914 aaKnown RBP17.26■□□□□ 0.35
MCFD2-201ENST00000319466 CHMP2AO43633 222 aa17.26■□□□□ 0.35
MCFD2-201ENST00000319466 NT5C2P49902 561 aa17.26■□□□□ 0.35
MCFD2-201ENST00000319466 SLC7A5Q01650 507 aa17.26■□□□□ 0.35
MCFD2-201ENST00000319466 QRICH1Q2TAL8 776 aa17.26■□□□□ 0.35
MCFD2-201ENST00000319466 EIF3CQ99613 913 aaKnown RBP17.26■□□□□ 0.35
MCFD2-201ENST00000319466 FAM53CQ9NYF3 392 aa17.26■□□□□ 0.35
MCFD2-201ENST00000319466 ROBO3Q96MS0 1386 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms