RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 C6orf50Q9HD87 102 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 SSX2IPQ9Y2D8 614 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 OVOS2A0A0G2JMS6 1433 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 SNUPNO95149 360 aaKnown RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 PFKFB1P16118 471 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 IGHMBP2P38935 993 aaKnown RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 INAQ16352 499 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 POTEAQ6S8J7 498 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 OGFOD1Q8N543 542 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ALKBH8Q96BT7 664 aaKnown RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 DIABLOQ9NR28 239 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ZNF652Q9Y2D9 606 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 KIDINS220Q9ULH0 1771 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 TTI1O43156 1089 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 MMP14P50281 582 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 BIRC2Q13490 618 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 DHX34Q14147 1143 aaKnown RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 RIC8AQ9NPQ8 531 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ST7Q9NRC1 585 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 TBC1D23Q9NUY8 699 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 SMG5Q9UPR3 1016 aaKnown RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 CES2O00748 559 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 AGTP01019 485 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ACBD5Q5T8D3 534 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 FRA10AC1Q70Z53 315 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 ATL2Q8NHH9 583 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 CPLX3Q8WVH0 158 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 POP5Q969H6 163 aaKnown RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 LSG1Q9H089 658 aaKnown RBP4.91□□□□□ -1.62
CNOT1-201ENST00000317147 NUP98P52948 1817 aa4.91□□□□□ -1.62
CNOT1-201ENST00000317147 RSPH10B2B2RC85 870 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 MGEA5O60502 916 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 NDUFA10O95299 355 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 BAG3O95817 575 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 LDHCP07864 332 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 RSPH10BP0C881 870 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 LAMB3Q13751 1172 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 KRT79Q5XKE5 535 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 CCDC124Q96CT7 223 aaKnown RBP4.9□□□□□ -1.62
CNOT1-201ENST00000317147 UBN1Q9NPG3 1134 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 TMEM51Q9NW97 253 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 SCHIP1Q9P0W5 487 aaPredicted RBP4.9□□□□□ -1.62
CNOT1-201ENST00000317147 KDM6AO15550 1401 aaPredicted RBP4.9□□□□□ -1.62
CNOT1-201ENST00000317147 RAPGEF3O95398 923 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 MAGEA1P43355 309 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 KARSQ15046 597 aaKnown RBP4.9□□□□□ -1.62
CNOT1-201ENST00000317147 MICU3Q86XE3 530 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 LRRC8CQ8TDW0 803 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 NLRP7Q8WX94 980 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 RPGRQ92834 1020 aaKnown RBP4.9□□□□□ -1.62
CNOT1-201ENST00000317147 FHOD1Q9Y613 1164 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 RALGAPA1Q6GYQ0 2036 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 ILF2Q12905 390 aaKnown RBP4.9□□□□□ -1.62
CNOT1-201ENST00000317147 RIPK1Q13546 671 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 MORC3Q14149 939 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 KRT25Q7Z3Z0 450 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 NLRP14Q86W24 1093 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 CCDC89Q8N998 374 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 DDI1Q8WTU0 396 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 LRRC37BQ96QE4 947 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 PLEKHF1Q96S99 279 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 TPCN1Q9ULQ1 816 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 PCDHA7Q9UN72 937 aa4.9□□□□□ -1.62
CNOT1-201ENST00000317147 PACSIN2Q9UNF0 486 aaPredicted RBP4.9□□□□□ -1.62
CNOT1-201ENST00000317147 A0A1B0GW55 424 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 H0YCG3 227 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 STARD3NLO95772 234 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 DUX4L2P0CJ85 424 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 DUX4L3P0CJ86 424 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 DUX4L4P0CJ87 422 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 DUX4L5P0CJ88 424 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 DUX4L6P0CJ89 424 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 DUX4L7P0CJ90 424 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 SKIV2L2P42285 1042 aaKnown RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 PRPF4BQ13523 1007 aaKnown RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 CCDC93Q567U6 631 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 ZNF662Q6ZS27 426 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 G2E3Q7L622 706 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 SYN2Q92777 582 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 ZFRQ96KR1 1074 aaKnown RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 CARD10Q9BWT7 1032 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 ZCCHC17Q9NP64 241 aaKnown RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 TXNDC16Q9P2K2 825 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 DUX4Q9UBX2 424 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 CTDP1Q9Y5B0 961 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 SCN5AQ14524 2016 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 MLH3Q9UHC1 1453 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 LOC102724159A0A0B4J2E5 919 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 STK10O94804 968 aaKnown RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 CDR2Q01850 454 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 PWP2Q15269 919 aaKnown RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 ASIC2Q16515 512 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 NDUFA5Q16718 116 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 TMEM259Q4ZIN3 620 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 CAVIN4Q5BKX8 364 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 RHOT2Q8IXI1 618 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 KLHDC4Q8TBB5 520 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 TRIM15Q9C019 465 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 ATG3Q9NT62 314 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms