RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 PLCD1P51178 756 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 CFAP100Q494V2 611 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 FIGNQ5HY92 759 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 ANKRD20A2Q5SQ80 823 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 ANKRD20A1Q5TYW2 823 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 ANKRD20A3Q5VUR7 823 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 MAATS1Q7Z4T9 603 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 NUTM2AQ8IVF1 878 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 GSPT2Q8IYD1 628 aaKnown RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 DPF2Q92785 391 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 NAF1Q96HR8 494 aaKnown RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 C8orf76Q96K31 380 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 NAPGQ99747 312 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 BOLA2Q9H3K6 86 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 NDST4Q9H3R1 872 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 RHBDL2Q9NX52 303 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 ITM2BQ9Y287 266 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 ROBO3Q96MS0 1386 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 A0A1W2PQC6 194 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 PFDN1O60925 122 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 ATP2C2O75185 946 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 SERPINC1P01008 464 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 ALADP13716 330 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 CCND1P24385 295 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 HOXA10P31260 410 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 STAT6P42226 847 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 PIP4K2AP48426 406 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 TAF11Q15544 211 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 CLPPQ16740 277 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 IGDCC4Q8TDY8 1250 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 CTNNBL1Q8WYA6 563 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 KIFAP3Q92845 792 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 FERMT2Q96AC1 680 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 MOV10L1Q9BXT6 1211 aaKnown RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 FANCLQ9NW38 375 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 UBAP1Q9NZ09 502 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 FBXO2Q9UK22 296 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 FAM184BQ9ULE4 1060 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 TTF2Q9UNY4 1162 aaKnown RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 EIF3FO00303 357 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 EVI5O60447 810 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 LGR5O75473 907 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 ATP1A3P13637 1013 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 CCNG1P51959 295 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 OXCT1P55809 520 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 SPAG1Q07617 926 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 FOXD4Q12950 439 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 SPECC1LQ69YQ0 1117 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 ANO7Q6IWH7 933 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 KLHL10Q6JEL2 608 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 SHC4Q6S5L8 630 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 PI16Q6UXB8 463 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 CCNI2Q6ZMN8 369 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 COPS6Q7L5N1 327 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 PNMA8AQ86V59 439 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-201ENST00000316433 LMNTD2Q8IXW0 634 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 SLC15A3Q8IY34 581 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 SLC35F6Q8N357 371 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 CCDC63Q8NA47 563 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 SMC1BQ8NDV3 1235 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 FGD4Q96M96 766 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 TRAPPC9Q96Q05 1148 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 GSDMAQ96QA5 445 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 INTS13Q9NVM9 706 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 ABCF2Q9UG63 623 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 MROH5Q6ZUA9 1318 aa7.31□□□□□ -1.24
ZNF540-201ENST00000316433 ACTN4O43707 911 aaKnown RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 PSMC1P62191 440 aaKnown RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 MAP3K12Q12852 859 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 NCAPH2Q6IBW4 605 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 MPRIPQ6WCQ1 1025 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 NANOGNBQ7Z5D8 188 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 SH2D3CQ8N5H7 860 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 TC2NQ8N9U0 490 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 ZBTB38Q8NAP3 1195 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 AENQ8WTP8 325 aaKnown RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 NOC3LQ8WTT2 800 aaKnown RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 ZNF496Q96IT1 587 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 MYD88Q99836 296 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 SYT15Q9BQS2 421 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 RNF26Q9BY78 433 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 KRT23Q9C075 422 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 CCDC8Q9H0W5 538 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 RGPD3A6NKT7 1758 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 RGPD4Q7Z3J3 1758 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 PPIP5K2O43314 1243 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 MMP1P03956 469 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 PRLRP16471 622 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 FLT3P36888 993 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 MDH1P40925 334 aaKnown RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 PSMD7P51665 324 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 TCIRG1Q13488 830 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 COL9A3Q14050 684 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 APBB1IPQ7Z5R6 666 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 METTL16Q86W50 562 aaKnown RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 PDILTQ8N807 584 aa7.3□□□□□ -1.24
ZNF540-201ENST00000316433 KRI1Q8N9T8 703 aaKnown RBP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.3□□□□□ -1.24
ZNF540-201ENST00000316433 ANKS1AQ92625 1134 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms