RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 CARSP49589 748 aaKnown RBP9.45□□□□□ -0.9
USF3-201ENST00000316407 MDH1BQ5I0G3 518 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 CADPS2Q86UW7 1296 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 GCNT4Q9P109 453 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 TRAF3IP3Q9Y228 551 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 SYCP2Q9BX26 1530 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 USP27XA6NNY8 438 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 PRPF6O94906 941 aaKnown RBP9.45□□□□□ -0.9
USF3-201ENST00000316407 ARHGDIAP52565 204 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 DTX3LQ8TDB6 740 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 HDAC6Q9UBN7 1215 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 MYH9P35579 1960 aaKnown RBP9.45□□□□□ -0.9
USF3-201ENST00000316407 PNMA6EA0A0J9YXQ4 647 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 ADNPQ9H2P0 1102 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 ADCY7P51828 1080 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 STAT2P52630 851 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 ATG16L1Q676U5 607 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 SYT2Q8N9I0 419 aaPredicted RBP9.45□□□□□ -0.9
USF3-201ENST00000316407 COQ7Q99807 217 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 NDE1Q9NXR1 346 aa9.45□□□□□ -0.9
USF3-201ENST00000316407 UBTFL6P0CB48 400 aaPredicted RBP9.44□□□□□ -0.9
USF3-201ENST00000316407 BLVRAP53004 296 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 EPHB1P54762 984 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 ADCY9O60503 1353 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 RGS12O14924 1447 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 KCNA3P22001 575 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 RINT1Q6NUQ1 792 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 ARMCX6Q7L4S7 300 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 E7EWF7 191 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 PI4K2BG5E9Z4 385 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 PCGF5Q86SE9 256 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 ARHGAP18Q8N392 663 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 OLFM3Q96PB7 478 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 EXOC7Q9UPT5 735 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 EXOC3L4Q17RC7 722 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 WDR75Q8IWA0 830 aaKnown RBP9.44□□□□□ -0.9
USF3-201ENST00000316407 CDKL2Q92772 493 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 STX18Q9P2W9 335 aaKnown RBP9.44□□□□□ -0.9
USF3-201ENST00000316407 DAB1O75553 588 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 STX1BP61266 288 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 MYOCDQ8IZQ8 938 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 METTL13Q8N6R0 699 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 NEK9Q8TD19 979 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 TTC17Q96AE7 1141 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 GOLGA8QA0A0J9YX86 632 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 GOLGA8OA6NCC3 632 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 F5H423 210 aaPredicted RBP9.44□□□□□ -0.9
USF3-201ENST00000316407 GOLGA8NF8WBI6 632 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 NOP56O00567 594 aaKnown RBP9.44□□□□□ -0.9
USF3-201ENST00000316407 UPF3AQ9H1J1 476 aaKnown RBP9.44□□□□□ -0.9
USF3-201ENST00000316407 REXO1Q8N1G1 1221 aaKnown RBP9.44□□□□□ -0.9
USF3-201ENST00000316407 AGR3Q8TD06 166 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 CCHCR1Q8TD31 782 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 ASZ1Q8WWH4 475 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 TUBGCP2Q9BSJ2 902 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 DISC1Q9NRI5 854 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 ARPP21Q9UBL0 812 aaPredicted RBP9.44□□□□□ -0.9
USF3-201ENST00000316407 ELF1P32519 619 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 E9PMD0 336 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 GLE1Q53GS7 698 aaKnown RBP9.44□□□□□ -0.9
USF3-201ENST00000316407 TTC6Q86TZ1 520 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 GJA10Q969M2 543 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 PRMT1Q99873 361 aaKnown RBP9.44□□□□□ -0.9
USF3-201ENST00000316407 RIOK1Q9BRS2 568 aaKnown RBP9.44□□□□□ -0.9
USF3-201ENST00000316407 SERPINB3P29508 390 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 CCDC127Q96BQ5 260 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 FGFR1OP2Q9NVK5 253 aa9.44□□□□□ -0.9
USF3-201ENST00000316407 NSFL1CQ9UNZ2 370 aaKnown RBP9.44□□□□□ -0.9
USF3-201ENST00000316407 K7ENM7 598 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 GARSP41250 739 aaKnown RBP9.43□□□□□ -0.9
USF3-201ENST00000316407 YARSP54577 528 aaKnown RBP9.43□□□□□ -0.9
USF3-201ENST00000316407 TMPRSS15P98073 1019 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 SLC44A4Q53GD3 710 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 MUM1L1Q5H9M0 696 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 CC2D1AQ6P1N0 951 aaPredicted RBP9.43□□□□□ -0.9
USF3-201ENST00000316407 G2E3Q7L622 706 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 ADAMTS2O95450 1211 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 PITPNM3Q9BZ71 974 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 ADA2Q9NZK5 511 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 SUCLA2Q9P2R7 463 aaPredicted RBP9.43□□□□□ -0.9
USF3-201ENST00000316407 DIAPH2O60879 1101 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 ATP1A3P13637 1013 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 BTNL9Q6UXG8 535 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 EPM2AIP1Q7L775 607 aaPredicted RBP9.43□□□□□ -0.9
USF3-201ENST00000316407 RETREG2Q8NC44 543 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 PJA2O43164 708 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 GNA14O95837 355 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 MDM2Q00987 491 aaPredicted RBP9.43□□□□□ -0.9
USF3-201ENST00000316407 PTH1RQ03431 593 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 RIMBP2O15034 1052 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 FAM180AQ6UWF9 173 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 ATP6V1E2Q96A05 226 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 MMS19Q96T76 1030 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 CARMIL3Q8ND23 1372 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 CUL1Q13616 776 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 KRT31Q15323 416 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 NAIF1Q69YI7 327 aaPredicted RBP9.43□□□□□ -0.9
USF3-201ENST00000316407 SZRD1Q7Z422 152 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 LONP2Q86WA8 852 aa9.43□□□□□ -0.9
USF3-201ENST00000316407 RASSF3Q86WH2 238 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms