RNA–Protein interactions for RNA: ENST00000311052.9

CARHSP1-201, Transcript of calcium regulated heat stable protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARHSP1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-201ENST00000311052 PRDM5Q9NQX1 630 aaPredicted RBP20.78■□□□□ 0.92
CARHSP1-201ENST00000311052 POLR3EQ9NVU0 708 aa20.78■□□□□ 0.92
CARHSP1-201ENST00000311052 CYP46A1Q9Y6A2 500 aa20.78■□□□□ 0.92
CARHSP1-201ENST00000311052 FRMPD4Q14CM0 1322 aa20.78■□□□□ 0.92
CARHSP1-201ENST00000311052 A6NJR5 290 aa20.77■□□□□ 0.92
CARHSP1-201ENST00000311052 CLTBP09497 229 aa20.77■□□□□ 0.92
CARHSP1-201ENST00000311052 ADD1P35611 737 aaKnown RBP20.77■□□□□ 0.92
CARHSP1-201ENST00000311052 LY6KQ17RY6 165 aa20.77■□□□□ 0.92
CARHSP1-201ENST00000311052 KCNV1Q6PIU1 500 aa20.77■□□□□ 0.92
CARHSP1-201ENST00000311052 USP17L6PQ6QN14 398 aa20.77■□□□□ 0.92
CARHSP1-201ENST00000311052 HEATR3Q7Z4Q2 680 aa20.77■□□□□ 0.92
CARHSP1-201ENST00000311052 IL31RAQ8NI17 732 aa20.77■□□□□ 0.92
CARHSP1-201ENST00000311052 DDX41Q9UJV9 622 aaKnown RBP20.77■□□□□ 0.92
CARHSP1-201ENST00000311052 MRVI1Q9Y6F6 885 aa20.77■□□□□ 0.92
CARHSP1-201ENST00000311052 V9GY48 417 aaPredicted RBP20.77■□□□□ 0.92
CARHSP1-201ENST00000311052 DNAH12Q6ZR08 3092 aa20.77■□□□□ 0.92
CARHSP1-201ENST00000311052 KPNA6O60684 536 aa20.76■□□□□ 0.91
CARHSP1-201ENST00000311052 GH1P01241 217 aa20.76■□□□□ 0.91
CARHSP1-201ENST00000311052 EVCP57679 992 aa20.76■□□□□ 0.91
CARHSP1-201ENST00000311052 MDM2Q00987 491 aaPredicted RBP20.76■□□□□ 0.91
CARHSP1-201ENST00000311052 FAAP100Q0VG06 881 aa20.76■□□□□ 0.91
CARHSP1-201ENST00000311052 ITGA7Q13683 1181 aa20.76■□□□□ 0.91
CARHSP1-201ENST00000311052 SH3RF1Q7Z6J0 888 aa20.76■□□□□ 0.91
CARHSP1-201ENST00000311052 SLC43A3Q8NBI5 491 aa20.76■□□□□ 0.91
CARHSP1-201ENST00000311052 NID2Q14112 1375 aa20.75■□□□□ 0.91
CARHSP1-201ENST00000311052 TRIM43BA6NCK2 446 aa20.75■□□□□ 0.91
CARHSP1-201ENST00000311052 hCG_1984214I3L0E3 225 aa20.75■□□□□ 0.91
CARHSP1-201ENST00000311052 KIAA0355O15063 1070 aa20.75■□□□□ 0.91
CARHSP1-201ENST00000311052 STAM2O75886 525 aa20.75■□□□□ 0.91
CARHSP1-201ENST00000311052 RGS20O76081 388 aa20.75■□□□□ 0.91
CARHSP1-201ENST00000311052 PURAQ00577 322 aaKnown RBP20.75■□□□□ 0.91
CARHSP1-201ENST00000311052 WWC2Q6AWC2 1192 aa20.75■□□□□ 0.91
CARHSP1-201ENST00000311052 ZNF713Q8N859 430 aaPredicted RBP20.75■□□□□ 0.91
CARHSP1-201ENST00000311052 GPKOWQ92917 476 aaPredicted RBP eCLIP20.75■□□□□ 0.915e-7■■■□□ 17.4
CARHSP1-201ENST00000311052 TRIM43Q96BQ3 446 aaPredicted RBP20.75■□□□□ 0.91
CARHSP1-201ENST00000311052 UBE2OQ9C0C9 1292 aaKnown RBP20.75■□□□□ 0.91
CARHSP1-201ENST00000311052 TMEM39AQ9NV64 488 aa20.75■□□□□ 0.91
CARHSP1-201ENST00000311052 MYL3P08590 195 aa20.74■□□□□ 0.91
CARHSP1-201ENST00000311052 TGFB3P10600 412 aa20.74■□□□□ 0.91
CARHSP1-201ENST00000311052 ARHGAP1Q07960 439 aa20.74■□□□□ 0.91
CARHSP1-201ENST00000311052 PPP1R18Q6NYC8 613 aa20.74■□□□□ 0.91
CARHSP1-201ENST00000311052 XRRA1Q6P2D8 792 aa20.74■□□□□ 0.91
CARHSP1-201ENST00000311052 TEX2Q8IWB9 1127 aa20.74■□□□□ 0.91
CARHSP1-201ENST00000311052 EMID1Q96A84 441 aaPredicted RBP20.74■□□□□ 0.91
CARHSP1-201ENST00000311052 MTG1Q9BT17 334 aaPredicted RBP20.74■□□□□ 0.91
CARHSP1-201ENST00000311052 PCDH10Q9P2E7 1040 aa20.74■□□□□ 0.91
CARHSP1-201ENST00000311052 GRIN2DO15399 1336 aa20.74■□□□□ 0.91
CARHSP1-201ENST00000311052 TLR3O15455 904 aaKnown RBP20.73■□□□□ 0.91
CARHSP1-201ENST00000311052 PDIA3P30101 505 aaKnown RBP20.73■□□□□ 0.91
CARHSP1-201ENST00000311052 NAPAP54920 295 aa20.73■□□□□ 0.91
CARHSP1-201ENST00000311052 ANAPC15P60006 121 aa20.73■□□□□ 0.91
CARHSP1-201ENST00000311052 PSMC6P62333 389 aa20.73■□□□□ 0.91
CARHSP1-201ENST00000311052 MRPS9P82933 396 aaKnown RBP20.73■□□□□ 0.91
CARHSP1-201ENST00000311052 LAMC2Q13753 1193 aa20.73■□□□□ 0.91
CARHSP1-201ENST00000311052 TOB2Q14106 344 aaPredicted RBP20.73■□□□□ 0.91
CARHSP1-201ENST00000311052 GNPTABQ3T906 1256 aa20.73■□□□□ 0.91
CARHSP1-201ENST00000311052 FAM126BQ8IXS8 530 aa20.73■□□□□ 0.91
CARHSP1-201ENST00000311052 AFG1LQ8WV93 481 aa20.73■□□□□ 0.91
CARHSP1-201ENST00000311052 UPF3BQ9BZI7 483 aaKnown RBP20.73■□□□□ 0.91
CARHSP1-201ENST00000311052 BARHL2Q9NY43 387 aa20.73■□□□□ 0.91
CARHSP1-201ENST00000311052 RAG1P15918 1043 aa20.72■□□□□ 0.91
CARHSP1-201ENST00000311052 PCNX4Q63HM2 1172 aa20.72■□□□□ 0.91
CARHSP1-201ENST00000311052 DHX37Q8IY37 1157 aaKnown RBP20.72■□□□□ 0.91
CARHSP1-201ENST00000311052 BADQ92934 168 aa20.72■□□□□ 0.91
CARHSP1-201ENST00000311052 ZFP91Q96JP5 570 aaPredicted RBP20.72■□□□□ 0.91
CARHSP1-201ENST00000311052 INPP4AQ96PE3 977 aaPredicted RBP20.72■□□□□ 0.91
CARHSP1-201ENST00000311052 PDRG1Q9NUG6 133 aa20.72■□□□□ 0.91
CARHSP1-201ENST00000311052 SPDYE3A6NKU9 549 aa20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 STXBP3O00186 592 aa20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 PRPF3O43395 683 aaKnown RBP20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 CD4P01730 458 aa20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 MMP3P08254 477 aa20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 ICAM3P32942 547 aa20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 UBE2SQ16763 222 aa20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 PFKFB3Q16875 520 aaPredicted RBP20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 TYW1BQ6NUM6 668 aa20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 TDHQ8IZJ6 230 aa20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 ZNF274Q96GC6 653 aaPredicted RBP20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 GLT8D2Q9H1C3 349 aa20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 RIC8AQ9NPQ8 531 aa20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 TBX21Q9UL17 535 aa20.71■□□□□ 0.91
CARHSP1-201ENST00000311052 SPATA31C2B4DYI2 1134 aa20.7■□□□□ 0.9
CARHSP1-201ENST00000311052 SCG2P13521 617 aa20.7■□□□□ 0.9
CARHSP1-201ENST00000311052 ITGB8P26012 769 aa20.7■□□□□ 0.9
CARHSP1-201ENST00000311052 FXR1P51114 621 aaKnown RBP eCLIP20.7■□□□□ 0.9
CARHSP1-201ENST00000311052 NTRK3Q16288 839 aa20.7■□□□□ 0.9
CARHSP1-201ENST00000311052 CELF3Q5SZQ8 465 aaKnown RBP20.7■□□□□ 0.9
CARHSP1-201ENST00000311052 PPTC7Q8NI37 304 aa20.7■□□□□ 0.9
CARHSP1-201ENST00000311052 EHMT1Q9H9B1 1298 aa20.7■□□□□ 0.9
CARHSP1-201ENST00000311052 RTEL1Q9NZ71 1219 aa20.7■□□□□ 0.9
CARHSP1-201ENST00000311052 PCDHA6Q9UN73 950 aa20.7■□□□□ 0.9
CARHSP1-201ENST00000311052 PCDHA8Q9Y5H6 950 aa20.7■□□□□ 0.9
CARHSP1-201ENST00000311052 SMCO2A6NFE2 343 aa20.69■□□□□ 0.9
CARHSP1-201ENST00000311052 GGPS1O95749 300 aa20.69■□□□□ 0.9
CARHSP1-201ENST00000311052 TIMP1P01033 207 aa20.69■□□□□ 0.9
CARHSP1-201ENST00000311052 UBA1P22314 1058 aaKnown RBP20.69■□□□□ 0.9
CARHSP1-201ENST00000311052 ADCY7P51828 1080 aa20.69■□□□□ 0.9
CARHSP1-201ENST00000311052 CCT2P78371 535 aaKnown RBP20.69■□□□□ 0.9
CARHSP1-201ENST00000311052 AKAP17AQ02040 695 aaKnown RBP20.69■□□□□ 0.9
CARHSP1-201ENST00000311052 SP2Q02086 613 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms