RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 OPTNQ96CV9 577 aa13.94□□□□□ -0.18
SPTBN2-201ENST00000309996 MAP3K1Q13233 1512 aa13.94□□□□□ -0.18
SPTBN2-201ENST00000309996 YTHDC2Q9H6S0 1430 aaKnown RBP13.94□□□□□ -0.18
SPTBN2-201ENST00000309996 SNX1Q13596 522 aa13.94□□□□□ -0.18
SPTBN2-201ENST00000309996 HABP4Q5JVS0 413 aaKnown RBP13.94□□□□□ -0.18
SPTBN2-201ENST00000309996 TRIM42Q8IWZ5 723 aa13.94□□□□□ -0.18
SPTBN2-201ENST00000309996 PDCD6IPQ8WUM4 868 aaKnown RBP13.94□□□□□ -0.18
SPTBN2-201ENST00000309996 FAM227BQ96M60 508 aa13.94□□□□□ -0.18
SPTBN2-201ENST00000309996 SNX14Q9Y5W7 946 aa13.94□□□□□ -0.18
SPTBN2-201ENST00000309996 FRMD3A2A2Y4 597 aa13.94□□□□□ -0.18
SPTBN2-201ENST00000309996 CPP00450 1065 aa13.94□□□□□ -0.18
SPTBN2-201ENST00000309996 RGL1Q9NZL6 768 aa13.94□□□□□ -0.18
SPTBN2-201ENST00000309996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.94□□□□□ -0.18
SPTBN2-201ENST00000309996 KLC3Q6P597 504 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 UHMK1Q8TAS1 419 aaKnown RBP13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 PI4K2BQ8TCG2 481 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 THRAP3Q9Y2W1 955 aaKnown RBP13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 NSFP46459 744 aaKnown RBP13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 KCNA1Q09470 495 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 FAM47AQ5JRC9 791 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 KRT40Q6A162 431 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 MIS18BP1Q6P0N0 1132 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 POLR2FP61218 127 aaKnown RBP13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 ART3Q13508 389 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 AP1ARQ63HQ0 302 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 FLAD1Q8NFF5 587 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 URGCPQ8TCY9 931 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 BCAS4Q8TDM0 211 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 XPO4Q9C0E2 1151 aaKnown RBP13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 KRT26Q7Z3Y9 468 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 THEM5Q8N1Q8 247 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 DAAM1Q9Y4D1 1078 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 INO80B-WBP1J3KQ70 363 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 HOXD10P28358 340 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 LRCH2Q5VUJ6 765 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 PPP2R3CQ969Q6 453 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 TEKT3Q9BXF9 490 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 INO80BQ9C086 356 aaPredicted RBP13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 ARPP21Q9UBL0 812 aaPredicted RBP13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 SH3KBP1Q96B97 665 aa13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 ADD3Q9UEY8 706 aaKnown RBP13.93□□□□□ -0.18
SPTBN2-201ENST00000309996 DOK7Q18PE1 504 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 MFSD14BQ5SR56 506 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 COPRSQ9NQ92 184 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 ACTN1P12814 892 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 MAP3K7CLP57077 242 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 SKOR1P84550 965 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 POLA2Q14181 598 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 MXD4Q14582 209 aaPredicted RBP13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 KRT80Q6KB66 452 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 PIP4K2CQ8TBX8 421 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 SERTAD1Q9UHV2 236 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 TTI1O43156 1089 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 TRPA1O75762 1119 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 NSUN2Q08J23 767 aaKnown RBP eCLIP13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 DRP2Q13474 957 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 ODR4Q5SWX8 454 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 RWDD4Q6NW29 188 aaKnown RBP13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 CCDC127Q96BQ5 260 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 ZFYVE19Q96K21 471 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 PRPF4O43172 522 aaKnown RBP eCLIP13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 RLBP1P12271 317 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 TRAPPC10P48553 1259 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 PTK2Q05397 1052 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 FANCAO15360 1455 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 RPSAP08865 295 aaKnown RBP13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 ANO4Q32M45 955 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 TTC19Q6DKK2 380 aaPredicted RBP13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 GIMAP4Q9NUV9 329 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 INTS9Q9NV88 658 aaKnown RBP13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 SLC10A4Q96EP9 437 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 NUDCD1Q96RS6 583 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 DENND4BO75064 1496 aaPredicted RBP13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 TOPBP1Q92547 1522 aa13.92□□□□□ -0.18
SPTBN2-201ENST00000309996 MYL7Q01449 175 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 MYO1EQ12965 1108 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 RAB42Q8N4Z0 105 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 MCF2LO15068 1137 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.91□□□□□ -0.183e-6■■□□□ 12.4
SPTBN2-201ENST00000309996 KPNA2P52292 529 aaKnown RBP13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 AOC3Q16853 763 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 IMPG1Q17R60 797 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 DSTYKQ6XUX3 929 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 PATL1Q86TB9 770 aaKnown RBP13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 ENOX1Q8TC92 643 aaKnown RBP13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 NACC1Q96RE7 527 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 PPP1R16BQ96T49 567 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 CHEK2O96017 543 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 TCP1P17987 556 aaKnown RBP13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 SCNN1DP51172 638 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 TRMT10CQ7L0Y3 403 aaKnown RBP13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 KRT27Q7Z3Y8 459 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 MECOMQ03112 1051 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 DESI2Q9BSY9 194 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 DENND3A2RUS2 1198 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 LIG3P49916 1009 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 TMED1Q13445 227 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 CCDC197Q8NCU1 140 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 FBXO41Q8TF61 875 aa13.91□□□□□ -0.18
SPTBN2-201ENST00000309996 DBNDD2Q9BQY9 259 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms