RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MEIS1O00470 390 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 ECE2O60344 883 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
PTPN2-201ENST00000309660 CCDC40Q4G0X9 1142 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 ZNF713Q8N859 430 aaPredicted RBP12.85□□□□□ -0.35
PTPN2-201ENST00000309660 CCDC42Q96M95 316 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 NHEJ1Q9H9Q4 299 aaPredicted RBP12.85□□□□□ -0.35
PTPN2-201ENST00000309660 DUSP10Q9Y6W6 482 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 LY75O60449 1722 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 IGKV6D-41A0A0C4DH26 115 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 A0A1W2PQC6 194 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 KLRG2A4D1S0 409 aaPredicted RBP12.85□□□□□ -0.35
PTPN2-201ENST00000309660 HOXA13P31271 388 aaPredicted RBP12.85□□□□□ -0.35
PTPN2-201ENST00000309660 CYLC1P35663 651 aaPredicted RBP12.85□□□□□ -0.35
PTPN2-201ENST00000309660 DMTNQ08495 405 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 HHIPL2Q6UWX4 724 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 CEP112Q8N8E3 955 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 SMCR8Q8TEV9 937 aaPredicted RBP12.85□□□□□ -0.35
PTPN2-201ENST00000309660 HAS1Q92839 578 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 JAKMIP2Q96AA8 810 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 ZFP91Q96JP5 570 aaPredicted RBP12.85□□□□□ -0.35
PTPN2-201ENST00000309660 CRACR2AQ9BSW2 395 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 SUGT1Q9Y2Z0 365 aa12.85□□□□□ -0.35
PTPN2-201ENST00000309660 CTAGE15A4D2H0 777 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 ERICH4A6NGS2 130 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 CTAGE8P0CG41 777 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 HERC4Q5GLZ8 1057 aaPredicted RBP12.84□□□□□ -0.35
PTPN2-201ENST00000309660 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 CTAGE6Q86UF2 777 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 CTAGE4Q8IX94 777 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 RABGGTAQ92696 567 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 HINFPQ9BQA5 517 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 NDST4Q9H3R1 872 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 NLRC4Q9NPP4 1024 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 PI4KBQ9UBF8 816 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 H0YIN7 160 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 EPHB6O15197 1021 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 CYP4A11Q02928 519 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 ZYXQ15942 572 aaKnown RBP12.84□□□□□ -0.35
PTPN2-201ENST00000309660 MIIPQ5JXC2 388 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 RRAGAQ7L523 313 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 PODNQ7Z5L7 613 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 TSG101Q99816 390 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 ANO3Q9BYT9 981 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 LACRTQ9GZZ8 138 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 PANK4Q9NVE7 773 aa12.84□□□□□ -0.35
PTPN2-201ENST00000309660 F5H6K3 240 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 GH2P01242 217 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 HERVK_113P62684 666 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 ARID5AQ03989 594 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 KLRC3Q07444 240 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 SPA17Q15506 151 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 CC2D1AQ6P1N0 951 aaPredicted RBP12.83□□□□□ -0.35
PTPN2-201ENST00000309660 SLC30A10Q6XR72 485 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 RSRC2Q7L4I2 434 aaKnown RBP12.83□□□□□ -0.35
PTPN2-201ENST00000309660 GPBP1Q86WP2 473 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 CAGE1Q8TC20 777 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 CCDC17Q96LX7 622 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 PSMB7Q99436 277 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 DNAJC7Q99615 494 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 JADE2Q9NQC1 790 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 MYO6Q9UM54 1294 aa12.83□□□□□ -0.35
PTPN2-201ENST00000309660 SRCAPQ6ZRS2 3230 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 CLRN2A0PK11 232 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 POTEFA5A3E0 1075 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 ZBTB22O15209 634 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 AKR1B10O60218 316 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 POTEIP0CG38 1075 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 NOVP48745 357 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 TDRD12Q587J7 1177 aaKnown RBP12.83□□□□□ -0.36
PTPN2-201ENST00000309660 FAM26FQ5R3K3 315 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 POTEGQ6S5H5 508 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 POTEEQ6S8J3 1075 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 MYOCDQ8IZQ8 938 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 ANKRD13CQ8N6S4 541 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 FGFBP2Q9BYJ0 223 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 FAM198AQ9UFP1 575 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 TCP10L2B9ZVM9 353 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 KRT86O43790 486 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 ZNF76P36508 570 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 KRT83P78385 493 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 ZBED6P86452 979 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 COASYQ13057 564 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 ABCB5Q2M3G0 1257 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 VWA3BQ502W6 1294 aa12.83□□□□□ -0.36
PTPN2-201ENST00000309660 ZCCHC17Q9NP64 241 aaKnown RBP12.83□□□□□ -0.36
PTPN2-201ENST00000309660 RCCD1A6NED2 376 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 SPDYE3A6NKU9 549 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 SASH3O75995 380 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 ATP1A1P05023 1023 aaKnown RBP12.82□□□□□ -0.36
PTPN2-201ENST00000309660 DNA2P51530 1060 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 NAP1L1P55209 391 aaKnown RBP12.82□□□□□ -0.36
PTPN2-201ENST00000309660 PABPC4Q13310 644 aaKnown RBP eCLIP12.82□□□□□ -0.36
PTPN2-201ENST00000309660 PDIA5Q14554 519 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 CENPPQ6IPU0 288 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 SH3BP5LQ7L8J4 393 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 NUP58Q9BVL2 599 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 HAUS4Q9H6D7 363 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 RASSF10A6NK89 507 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 PLA2G4AP47712 749 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms