RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 FLOT1O75955 427 aa25.18■■□□□ 1.62
PDLIM2-202ENST00000308354 PRCPP42785 496 aa25.18■■□□□ 1.62
PDLIM2-202ENST00000308354 TPD52L1Q16890 204 aaPredicted RBP25.18■■□□□ 1.62
PDLIM2-202ENST00000308354 ZNF112Q9UJU3 913 aa25.18■■□□□ 1.62
PDLIM2-202ENST00000308354 SBF1O95248 1867 aa25.18■■□□□ 1.62
PDLIM2-202ENST00000308354 PTPRAP18433 802 aa25.18■■□□□ 1.62
PDLIM2-202ENST00000308354 ZNF76P36508 570 aa25.18■■□□□ 1.62
PDLIM2-202ENST00000308354 ETNPPLQ8TBG4 499 aa25.18■■□□□ 1.62
PDLIM2-202ENST00000308354 PICK1Q9NRD5 415 aa25.18■■□□□ 1.62
PDLIM2-202ENST00000308354 DICER1Q9UPY3 1922 aaKnown RBP25.18■■□□□ 1.62
PDLIM2-202ENST00000308354 ASIC1P78348 528 aa25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 SPATA1Q5VX52 437 aa25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 MOXD1Q6UVY6 613 aa25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 LARP4BQ92615 738 aaKnown RBP25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 HOOK2Q96ED9 719 aa25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 RPAP3Q9H6T3 665 aaPredicted RBP25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 MAGEF1Q9HAY2 307 aa25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 GINM1Q9NU53 330 aa25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 ZHX2Q9Y6X8 837 aa25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 ICAM1P05362 532 aa25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 MYL1P05976 194 aa25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 Q4G0T1 1027 aa25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 SV2BQ7L1I2 683 aa25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 MYRIPQ8NFW9 859 aa25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 RAVER2Q9HCJ3 691 aaKnown RBP25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 HOMER2Q9NSB8 354 aa25.17■■□□□ 1.62
PDLIM2-202ENST00000308354 CCT6AP40227 531 aaKnown RBP25.16■■□□□ 1.62
PDLIM2-202ENST00000308354 CT47A1Q5JQC4 288 aaPredicted RBP25.16■■□□□ 1.62
PDLIM2-202ENST00000308354 SLC30A10Q6XR72 485 aa25.16■■□□□ 1.62
PDLIM2-202ENST00000308354 DYMQ7RTS9 669 aa25.16■■□□□ 1.62
PDLIM2-202ENST00000308354 NELFBQ8WX92 580 aa25.16■■□□□ 1.62
PDLIM2-202ENST00000308354 HPS3Q969F9 1004 aa25.16■■□□□ 1.62
PDLIM2-202ENST00000308354 KLRG1Q96E93 195 aa25.16■■□□□ 1.62
PDLIM2-202ENST00000308354 C7orf25Q9BPX7 421 aa25.16■■□□□ 1.62
PDLIM2-202ENST00000308354 ABCB11O95342 1321 aa25.16■■□□□ 1.62
PDLIM2-202ENST00000308354 SSC5DA1L4H1 1573 aa25.15■■□□□ 1.62
PDLIM2-202ENST00000308354 MYMKA6NI61 221 aa25.15■■□□□ 1.62
PDLIM2-202ENST00000308354 NFIBO00712 420 aa25.15■■□□□ 1.62
PDLIM2-202ENST00000308354 MSH4O15457 936 aa25.15■■□□□ 1.62
PDLIM2-202ENST00000308354 RHOBTB3O94955 611 aa25.15■■□□□ 1.62
PDLIM2-202ENST00000308354 BACE1P56817 501 aa25.15■■□□□ 1.62
PDLIM2-202ENST00000308354 KCNB1Q14721 858 aa25.15■■□□□ 1.62
PDLIM2-202ENST00000308354 SLFN12Q8IYM2 578 aa25.15■■□□□ 1.62
PDLIM2-202ENST00000308354 ZNF280CQ8ND82 737 aa25.15■■□□□ 1.62
PDLIM2-202ENST00000308354 RAD54LQ92698 747 aa25.15■■□□□ 1.62
PDLIM2-202ENST00000308354 STK17AQ9UEE5 414 aa25.15■■□□□ 1.62
PDLIM2-202ENST00000308354 POLR2AP24928 1970 aaKnown RBP25.15■■□□□ 1.62
PDLIM2-202ENST00000308354 ALAS1P13196 640 aa25.14■■□□□ 1.62
PDLIM2-202ENST00000308354 CIITAP33076 1130 aa25.14■■□□□ 1.62
PDLIM2-202ENST00000308354 AMPD3Q01432 767 aa25.14■■□□□ 1.62
PDLIM2-202ENST00000308354 PDE4DQ08499 809 aa25.14■■□□□ 1.62
PDLIM2-202ENST00000308354 PAK1Q13153 545 aa25.14■■□□□ 1.62
PDLIM2-202ENST00000308354 TMEM119Q4V9L6 283 aa25.14■■□□□ 1.62
PDLIM2-202ENST00000308354 TRMT1Q9NXH9 659 aaKnown RBP25.14■■□□□ 1.62
PDLIM2-202ENST00000308354 TNNT1P13805 278 aa25.14■■□□□ 1.61
PDLIM2-202ENST00000308354 HMGCS2P54868 508 aa25.14■■□□□ 1.61
PDLIM2-202ENST00000308354 WNK4Q96J92 1243 aa25.14■■□□□ 1.61
PDLIM2-202ENST00000308354 KIAA1024Q9UPX6 916 aa25.14■■□□□ 1.61
PDLIM2-202ENST00000308354 POTEB3A0JP26 581 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 POTECB2RU33 542 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 CYP3A4P08684 503 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 FCER1AP12319 257 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 SPIRE1Q08AE8 756 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 C9orf131Q5VYM1 1079 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 NCAPH2Q6IBW4 605 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 POTEBQ6S5H4 581 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 CCAR2Q8N163 923 aaKnown RBP25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 WDR18Q9BV38 432 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 SLC38A10Q9HBR0 1119 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 DOCK1Q14185 1865 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 IGLV3-22A0A075B6J6 115 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 TRIM49BA6NDI0 452 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 USP14P54578 494 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 GOLGA8FQ08AF8 430 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 GOLGA8DPQ0D2H9 430 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 ADSSL1Q8N142 457 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 GIMAP8Q8ND71 665 aaPredicted RBP25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 EXOC1Q9NV70 894 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 RWDD2AQ9UIY3 292 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 PPP1R9AQ9ULJ8 1098 aa25.13■■□□□ 1.61
PDLIM2-202ENST00000308354 E9PMD0 336 aa25.12■■□□□ 1.61
PDLIM2-202ENST00000308354 STK4Q13043 487 aa25.12■■□□□ 1.61
PDLIM2-202ENST00000308354 AS3MTQ9HBK9 375 aa25.12■■□□□ 1.61
PDLIM2-202ENST00000308354 MED24O75448 989 aa25.12■■□□□ 1.61
PDLIM2-202ENST00000308354 SSBP05455 408 aaKnown RBP eCLIP25.12■■□□□ 1.61
PDLIM2-202ENST00000308354 PMS1P54277 932 aaKnown RBP25.12■■□□□ 1.61
PDLIM2-202ENST00000308354 MUM1L1Q5H9M0 696 aa25.12■■□□□ 1.61
PDLIM2-202ENST00000308354 CLEC4DQ8WXI8 215 aa25.12■■□□□ 1.61
PDLIM2-202ENST00000308354 ADARB2Q9NS39 739 aaKnown RBP25.12■■□□□ 1.61
PDLIM2-202ENST00000308354 COL20A1Q9P218 1284 aa25.12■■□□□ 1.61
PDLIM2-202ENST00000308354 ADM5C9JUS6 153 aa25.11■■□□□ 1.61
PDLIM2-202ENST00000308354 TBX3O15119 743 aa25.11■■□□□ 1.61
PDLIM2-202ENST00000308354 CDKAL1Q5VV42 579 aa25.11■■□□□ 1.61
PDLIM2-202ENST00000308354 ATG4CQ96DT6 458 aa25.11■■□□□ 1.61
PDLIM2-202ENST00000308354 SUPT20HL1Q3ZLR7 823 aa25.1■■□□□ 1.61
PDLIM2-202ENST00000308354 E4F1Q66K89 784 aaPredicted RBP25.1■■□□□ 1.61
PDLIM2-202ENST00000308354 CREBRFQ8IUR6 639 aa25.1■■□□□ 1.61
PDLIM2-202ENST00000308354 PPP2R3BQ9Y5P8 575 aa25.1■■□□□ 1.61
PDLIM2-202ENST00000308354 POTEFA5A3E0 1075 aa25.1■■□□□ 1.61
PDLIM2-202ENST00000308354 POTEIP0CG38 1075 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms