RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SPAG5Q96R06 1193 aa16.16■□□□□ 0.18
PTPN9-201ENST00000306726 RNF26Q9BY78 433 aaPredicted RBP16.16■□□□□ 0.18
PTPN9-201ENST00000306726 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 FAM205AQ6ZU69 1335 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 GOLGA6L7A0A1B0GV03 622 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 KIF5BP33176 963 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 SP8Q8IXZ3 490 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 KIRREL3Q8IZU9 778 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 JPH2Q9BR39 696 aaPredicted RBP16.15■□□□□ 0.18
PTPN9-201ENST00000306726 ADAMTS1Q9UHI8 967 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 USP14P54578 494 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 PKN1Q16512 942 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 NBPF9Q3BBW0 867 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 SHISA4Q96DD7 197 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 MTRQ99707 1265 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 FAM169AQ9Y6X4 670 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 LRRC37AA6NMS7 1700 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 G3V3G9 751 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 SLURP2P0DP57 97 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 ARHGAP25P42331 645 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 DCAF8Q5TAQ9 597 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 ZNF658Q5TYW1 1059 aaPredicted RBP16.15■□□□□ 0.18
PTPN9-201ENST00000306726 MAEAQ7L5Y9 396 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 RDH13Q8NBN7 331 aa16.15■□□□□ 0.18
PTPN9-201ENST00000306726 SMCO2A6NFE2 343 aa16.14■□□□□ 0.17
PTPN9-201ENST00000306726 MYO1FO00160 1098 aa16.14■□□□□ 0.17
PTPN9-201ENST00000306726 VAV2P52735 878 aa16.14■□□□□ 0.17
PTPN9-201ENST00000306726 HERVK_113P62684 666 aa16.14■□□□□ 0.17
PTPN9-201ENST00000306726 GLIS3Q8NEA6 775 aa16.14■□□□□ 0.17
PTPN9-201ENST00000306726 CELF1Q92879 486 aaKnown RBP16.14■□□□□ 0.17
PTPN9-201ENST00000306726 KCNK3O14649 394 aa16.14■□□□□ 0.17
PTPN9-201ENST00000306726 PPEF1O14829 653 aaPredicted RBP16.14■□□□□ 0.17
PTPN9-201ENST00000306726 ABCB4P21439 1286 aa16.14■□□□□ 0.17
PTPN9-201ENST00000306726 ATP2B4P23634 1241 aa16.14■□□□□ 0.17
PTPN9-201ENST00000306726 SLC16A2P36021 539 aa16.14■□□□□ 0.17
PTPN9-201ENST00000306726 SNAP25P60880 206 aa16.14■□□□□ 0.17
PTPN9-201ENST00000306726 CCDC25Q86WR0 208 aa16.14■□□□□ 0.17
PTPN9-201ENST00000306726 GGT7Q9UJ14 662 aa16.14■□□□□ 0.17
PTPN9-201ENST00000306726 HPCAL4Q9UM19 191 aa16.14■□□□□ 0.17
PTPN9-201ENST00000306726 REXO2Q9Y3B8 237 aaKnown RBP16.14■□□□□ 0.17
PTPN9-201ENST00000306726 ARAP2Q8WZ64 1704 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 HEXIM1O94992 359 aaKnown RBP16.13■□□□□ 0.17
PTPN9-201ENST00000306726 GNAT2P19087 354 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 CDR1P51861 262 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 IQCEQ6IPM2 695 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 LRRC53A6NM62 1247 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 ZBTB7AO95365 584 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 IL17AQ16552 155 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 SUPT20HQ8NEM7 779 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 SNX29Q8TEQ0 813 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 PPM1EQ8WY54 764 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 ZNF512BQ96KM6 892 aaPredicted RBP16.13■□□□□ 0.17
PTPN9-201ENST00000306726 RWDD2AQ9UIY3 292 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 KLRF2D3W0D1 207 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 H7C1D1 291 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 RIMBP2O15034 1052 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 SARSP49591 514 aaKnown RBP16.13■□□□□ 0.17
PTPN9-201ENST00000306726 MECOMQ03112 1051 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 SELENOSQ9BQE4 189 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 DISC1Q9NRI5 854 aa16.13■□□□□ 0.17
PTPN9-201ENST00000306726 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.13■□□□□ 0.17
PTPN9-201ENST00000306726 EPHB6O15197 1021 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 CARSP49589 748 aaKnown RBP16.12■□□□□ 0.17
PTPN9-201ENST00000306726 KIF11P52732 1056 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 NNTQ13423 1086 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 UBE2SQ16763 222 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 KIAA0753Q2KHM9 967 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 C15orf52Q6ZUT6 534 aaKnown RBP16.12■□□□□ 0.17
PTPN9-201ENST00000306726 C3orf67Q6ZVT6 689 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 ZSCAN29Q8IWY8 852 aaPredicted RBP16.12■□□□□ 0.17
PTPN9-201ENST00000306726 TBC1D5Q92609 795 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 CHORDC1Q9UHD1 332 aaPredicted RBP16.12■□□□□ 0.17
PTPN9-201ENST00000306726 ATP6V0A2Q9Y487 856 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 MEIS1O00470 390 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 RPSAP08865 295 aaKnown RBP16.12■□□□□ 0.17
PTPN9-201ENST00000306726 SLC1A4P43007 532 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 ZFYVE27Q5T4F4 411 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 TMTC3Q6ZXV5 915 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 FAM133AQ8N9E0 248 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 STAG1Q8WVM7 1258 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 ATP8B1O43520 1251 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 COPB2P35606 906 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 TMED8Q6PL24 325 aaPredicted RBP16.12■□□□□ 0.17
PTPN9-201ENST00000306726 SLC30A10Q6XR72 485 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 PKD2L1Q9P0L9 805 aa16.12■□□□□ 0.17
PTPN9-201ENST00000306726 KCNJ6P48051 423 aa16.11■□□□□ 0.17
PTPN9-201ENST00000306726 DNM2P50570 870 aa16.11■□□□□ 0.17
PTPN9-201ENST00000306726 VGLL2Q8N8G2 317 aa16.11■□□□□ 0.17
PTPN9-201ENST00000306726 CCDC114Q96M63 670 aa16.11■□□□□ 0.17
PTPN9-201ENST00000306726 LSM14BQ9BX40 385 aaKnown RBP16.11■□□□□ 0.17
PTPN9-201ENST00000306726 RBM12Q9NTZ6 932 aaKnown RBP16.11■□□□□ 0.17
PTPN9-201ENST00000306726 MINPP1Q9UNW1 487 aa16.11■□□□□ 0.17
PTPN9-201ENST00000306726 TCRBV5S4A2TA0A5A2 114 aa16.11■□□□□ 0.17
PTPN9-201ENST00000306726 SEMA3EO15041 775 aa16.11■□□□□ 0.17
PTPN9-201ENST00000306726 MGARPQ8TDB4 240 aa16.11■□□□□ 0.17
PTPN9-201ENST00000306726 EYA3Q99504 573 aa16.11■□□□□ 0.17
PTPN9-201ENST00000306726 SGIP1Q9BQI5 828 aa16.11■□□□□ 0.17
PTPN9-201ENST00000306726 PCDHA13Q9Y5I0 950 aa16.11■□□□□ 0.17
PTPN9-201ENST00000306726 HERC4Q5GLZ8 1057 aaPredicted RBP16.11■□□□□ 0.17
PTPN9-201ENST00000306726 TBC1D31Q96DN5 1066 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms