RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 TAPT1Q6NXT6 567 aa12.59□□□□□ -0.39
CSPG4P1Y-201ENST00000306641 XRRA1Q6P2D8 792 aa12.59□□□□□ -0.39
CSPG4P1Y-201ENST00000306641 SEPT14Q6ZU15 432 aa12.59□□□□□ -0.39
CSPG4P1Y-201ENST00000306641 TLK2Q86UE8 772 aa12.59□□□□□ -0.39
CSPG4P1Y-201ENST00000306641 NSUN7Q8NE18 718 aaKnown RBP12.59□□□□□ -0.39
CSPG4P1Y-201ENST00000306641 ANO3Q9BYT9 981 aa12.59□□□□□ -0.39
CSPG4P1Y-201ENST00000306641 PDGFCQ9NRA1 345 aa12.59□□□□□ -0.39
CSPG4P1Y-201ENST00000306641 MRVI1Q9Y6F6 885 aa12.59□□□□□ -0.39
CSPG4P1Y-201ENST00000306641 SYNRGQ9UMZ2 1314 aa12.59□□□□□ -0.39
CSPG4P1Y-201ENST00000306641 ZEB2O60315 1214 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 CTDNEP1O95476 244 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 PGK1P00558 417 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 C6orf222P0C671 652 aaPredicted RBP12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 HMGN5P82970 282 aaKnown RBP12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 DUSP28Q4G0W2 176 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 JAKMIP3Q5VZ66 844 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 PCNX4Q63HM2 1172 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 KCNV1Q6PIU1 500 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 NECAB2Q7Z6G3 386 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 FAM184AQ8NB25 1140 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 OR6J1Q8NGC5 347 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 IL31RAQ8NI17 732 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 PGBD1Q96JS3 809 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 LLPHQ9BRT6 129 aaKnown RBP12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 ALG1Q9BT22 464 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 C11orf49Q9H6J7 331 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 BRMS1Q9HCU9 246 aa12.58□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 RBM47A0AV96 593 aaKnown RBP12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 TXNP10599 105 aaKnown RBP12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 SMPD1P17405 629 aa12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 CLK2P49760 499 aaKnown RBP12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 LRRC41Q15345 812 aa12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 BRDTQ58F21 947 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 GJC2Q5T442 439 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 GALNT17Q6IS24 598 aa12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 NLRX1Q86UT6 975 aa12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 VSIG10LQ86VR7 867 aa12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 PCSK9Q8NBP7 692 aaKnown RBP12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 PAWRQ96IZ0 340 aaKnown RBP12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 AIFM3Q96NN9 605 aa12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 HTATIP2Q9BUP3 242 aa12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 UPF3AQ9H1J1 476 aaKnown RBP12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 TMEM260Q9NX78 707 aa12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 PCDHA4Q9UN74 947 aa12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 Q9Y3F1 56 aa12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 KIF3AQ9Y496 699 aa12.57□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 DYNC1LI2O43237 492 aaPredicted RBP12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 ADCY6O43306 1168 aa12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 JAK2O60674 1132 aa12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 ADAMTS4O75173 837 aa12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 GH1P01241 217 aa12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 ZNF76P36508 570 aa12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 RGS19P49795 217 aa12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 CPT1AP50416 773 aa12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 GJA9P57773 515 aa12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 MLLT1Q03111 559 aaPredicted RBP12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 ST3GAL1Q11201 340 aa12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 BLIDQ8IZY5 108 aa12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 DIS3LQ8TF46 1054 aaKnown RBP12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 CDHR1Q96JP9 859 aa12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 GNEQ9Y223 722 aaKnown RBP12.56□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 MOXD2PA6NHM9 499 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 FIBPO43427 364 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 TGFB3P10600 412 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 CST5P28325 142 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 SREBF1P36956 1147 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 FOSBP53539 338 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 MRPS9P82933 396 aaKnown RBP12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 LY6KQ17RY6 165 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 GNASQ5JWF2 1037 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 DAGLBQ8NCG7 672 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 RASGRP4Q8TDF6 673 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 GPRASP2Q96D09 838 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 INPP4AQ96PE3 977 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 TSEN34Q9BSV6 310 aaKnown RBP12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 PHF20Q9BVI0 1012 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 SENP6Q9GZR1 1112 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 RTEL1Q9NZ71 1219 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 KCNJ14Q9UNX9 436 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 BRCA2P51587 3418 aa12.55□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 CCDC194A0A1B0GVG4 234 aa12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 MYADML2A6NDP7 307 aa12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 DTNBO60941 627 aa12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 ARIH2O95376 493 aa12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 CD2BP2O95400 341 aaKnown RBP12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 FDPSP14324 419 aaKnown RBP12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 KRT2P35908 639 aa12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 ARHGAP4P98171 946 aa12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 BEX3Q00994 111 aa12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 MTMR1Q13613 665 aa12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 SAFBQ15424 915 aaKnown RBP eCLIP12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 KCNA10Q16322 511 aa12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 FSCN1Q16658 493 aaKnown RBP12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 KRT25Q7Z3Z0 450 aa12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 DHX37Q8IY37 1157 aaKnown RBP12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 KLHDC9Q8NEP7 349 aa12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 C8orf76Q96K31 380 aa12.54□□□□□ -0.4
CSPG4P1Y-201ENST00000306641 DDX41Q9UJV9 622 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms