RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 USP17L11C9JVI0 530 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 USP17L18D6R9N7 530 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 USP17L22D6RA61 530 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 USP17L17D6RBQ6 530 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 USP17L19D6RCP7 530 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 USP17L20D6RJB6 530 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 POLR2DO15514 142 aaKnown RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 CDK8P49336 464 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 USP17L24Q0WX57 530 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 PAK1Q13153 545 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 RBBP5Q15291 538 aaKnown RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 DIXDC1Q155Q3 683 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 TPH2Q8IWU9 490 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 LRRC47Q8N1G4 583 aaKnown RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 MYH2Q9UKX2 1941 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 MED1Q15648 1581 aaPredicted RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 SYT1P21579 422 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 RASGRF1Q13972 1273 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 STXBP2Q15833 593 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 PHLDB2Q86SQ0 1253 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 IFT81Q8WYA0 676 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 TTC1Q99614 292 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 TRIM56Q9BRZ2 755 aaKnown RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 PCDHA4Q9UN74 947 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 XRN1Q8IZH2 1706 aaKnown RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 EXOC3O60645 756 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 CD19P15391 556 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 TBC1D8BQ0IIM8 1120 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 RABL6Q3YEC7 729 aaPredicted RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 TRIM50Q86XT4 487 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 TRMT44Q8IYL2 757 aaKnown RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 ZNF577Q9BSK1 485 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 TMEM106CQ9BVX2 250 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 LMO7Q8WWI1 1683 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 SLC25A27O95847 323 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 ABL1P00519 1130 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 S100BP04271 92 aaPredicted RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 DNM1Q05193 864 aaKnown RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 PRR16Q569H4 304 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 DNAJC21Q5F1R6 531 aaKnown RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 PPP4R3CPQ6ZMV5 832 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 METTL23Q86XA0 190 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 REM2Q8IYK8 340 aaPredicted RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 PRIMPOLQ96LW4 560 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 GCNAQ96QF7 691 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 ZNF189O75820 626 aaPredicted RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 STAM2O75886 525 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 IRX5P78411 483 aaPredicted RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 SLC9C1Q4G0N8 1177 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 KRT40Q6A162 431 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 ADARB2Q9NS39 739 aaKnown RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 LCMT1Q9UIC8 334 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 CNOT7Q9UIV1 285 aaKnown RBP9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 PNPLA7Q6ZV29 1317 aa9.1□□□□□ -0.95
PCDHB1-201ENST00000306549 A6NNZ2 444 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 IRX4P78413 519 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 ASIC2Q16515 512 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 TUBB8Q3ZCM7 444 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 PRR5LQ6MZQ0 368 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 CNPY4Q8N129 248 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 DACT1Q9NYF0 836 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 MAFGO15525 162 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 PSMD6Q15008 389 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 XKR9Q5GH70 373 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 CABP7Q86V35 215 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 CLSTN2Q9H4D0 955 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 BZW2Q9Y6E2 419 aaKnown RBP9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 MCM6Q14566 821 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 R3HDM1Q15032 1099 aaKnown RBP9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 ADALQ6DHV7 355 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 RNF207Q6ZRF8 634 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 ANKRD13AQ8IZ07 590 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 NSUN6Q8TEA1 469 aaKnown RBP9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 PARD3BQ8TEW8 1205 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 STK36Q9NRP7 1315 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 SYNRGQ9UMZ2 1314 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 IFNAR1P17181 557 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 ADORA1P30542 326 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 KIAA1586Q9HCI6 787 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 MAP3K20Q9NYL2 800 aaKnown RBP9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 IMPACTQ9P2X3 320 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 TSKSQ9UJT2 592 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 PPME1Q9Y570 386 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 KCNQ2O43526 872 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 GBP1P32455 592 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 RFC1P35251 1148 aaPredicted RBP9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 PPP4R1Q8TF05 950 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 TIPINQ9BVW5 301 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 PALD1Q9ULE6 856 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 GUCA1BQ9UMX6 200 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 ZHX2Q9Y6X8 837 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 C1orf228Q6PIY5 440 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 CSGALNACT2Q8N6G5 542 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 RAET1EQ8TD07 263 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 RSRC1Q96IZ7 334 aaKnown RBP9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 TCEANC2Q96MN5 208 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 SCN11AQ9UI33 1791 aa9.09□□□□□ -0.95
PCDHB1-201ENST00000306549 MYO1EQ12965 1108 aa9.09□□□□□ -0.96
PCDHB1-201ENST00000306549 PSMD2Q13200 908 aa9.09□□□□□ -0.96
PCDHB1-201ENST00000306549 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms