RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 LACTB2Q53H82 288 aaPredicted RBP20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 NAIF1Q69YI7 327 aaPredicted RBP20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 RAPGEF5Q92565 580 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 RSRC1Q96IZ7 334 aaKnown RBP20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 NDST4Q9H3R1 872 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 SIK3Q9Y2K2 1263 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 PNPLA7Q6ZV29 1317 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 GRID2IPA4D2P6 1211 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 CALM1P0DP23 149 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 CALM2P0DP24 149 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 CALM3P0DP25 149 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 SCG2P13521 617 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 CALRP27797 417 aaKnown RBP20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 PPP2R2AP63151 447 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 TROAPQ12815 778 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 PUM3Q15397 648 aaKnown RBP20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 RUFY4Q6ZNE9 571 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 SDR42E1Q8WUS8 393 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 BAIAP2L1Q9UHR4 511 aa20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 PACSIN2Q9UNF0 486 aaPredicted RBP20.8■□□□□ 0.92
CHRNB1-201ENST00000306071 CNTNAP5Q8WYK1 1306 aa20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 BIRC3Q13489 604 aa20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 CACNA2D4Q7Z3S7 1137 aa20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 SRBD1Q8N5C6 995 aaKnown RBP20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 PHF20L1A8MW92 1017 aa20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 MGRN1O60291 552 aa20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 FCER1AP12319 257 aa20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 ASIC1P78348 528 aa20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 EHHADHQ08426 723 aa20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 ZNF844Q08AG5 666 aa20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 NBPF9Q3BBW0 867 aa20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 ARMC9Q7Z3E5 817 aa20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 KRT28Q7Z3Y7 464 aa20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 CCDC84Q86UT8 332 aaPredicted RBP20.79■□□□□ 0.92
CHRNB1-201ENST00000306071 RTN2O75298 545 aa20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 CTSWP56202 376 aa20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 TRIM28Q13263 835 aaKnown RBP20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 BYSLQ13895 437 aaKnown RBP20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 LRRC45Q96CN5 670 aa20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 NOVA2Q9UNW9 492 aaKnown RBP20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 BUB1BO60566 1050 aaPredicted RBP20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 ATP6V1G2O95670 118 aa20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 VEGFAP15692 232 aaPredicted RBP20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 SEMA3FQ13275 785 aa20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 PPP1R7Q15435 360 aa20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 ACCSLQ4AC99 568 aa20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 HIBCHQ6NVY1 386 aaPredicted RBP20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 KIF6Q6ZMV9 814 aa20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 UBLCP1Q8WVY7 318 aaPredicted RBP20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 P3H4Q92791 437 aa20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 TATDN2Q93075 761 aa20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 ISCUQ9H1K1 167 aa20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 NOD2Q9HC29 1040 aa20.78■□□□□ 0.92
CHRNB1-201ENST00000306071 C5orf60A6NFR6 353 aa20.77■□□□□ 0.92
CHRNB1-201ENST00000306071 H0YGN5 161 aa20.77■□□□□ 0.92
CHRNB1-201ENST00000306071 SKAP2O75563 359 aaPredicted RBP20.77■□□□□ 0.92
CHRNB1-201ENST00000306071 DNAJC8O75937 253 aaPredicted RBP20.77■□□□□ 0.92
CHRNB1-201ENST00000306071 ERVK-9P63128 1117 aa20.77■□□□□ 0.92
CHRNB1-201ENST00000306071 ELF3P78545 371 aaPredicted RBP20.77■□□□□ 0.92
CHRNB1-201ENST00000306071 UAP1Q16222 522 aaPredicted RBP20.77■□□□□ 0.92
CHRNB1-201ENST00000306071 CCT6BQ92526 530 aa20.77■□□□□ 0.92
CHRNB1-201ENST00000306071 CNOT8Q9UFF9 292 aaKnown RBP20.77■□□□□ 0.92
CHRNB1-201ENST00000306071 NFS1Q9Y697 457 aa20.77■□□□□ 0.92
CHRNB1-201ENST00000306071 TAX1BP1Q86VP1 789 aa20.77■□□□□ 0.91
CHRNB1-201ENST00000306071 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.77■□□□□ 0.91
CHRNB1-201ENST00000306071 KDM4CQ9H3R0 1056 aa20.77■□□□□ 0.91
CHRNB1-201ENST00000306071 LRP2BPQ9P2M1 347 aa20.77■□□□□ 0.91
CHRNB1-201ENST00000306071 SNAP23O00161 211 aa20.76■□□□□ 0.91
CHRNB1-201ENST00000306071 USP38Q8NB14 1042 aa20.76■□□□□ 0.91
CHRNB1-201ENST00000306071 RASGRP4Q8TDF6 673 aa20.76■□□□□ 0.91
CHRNB1-201ENST00000306071 SLC5A1P13866 664 aa20.76■□□□□ 0.91
CHRNB1-201ENST00000306071 ASTE1Q2TB18 679 aaPredicted RBP20.76■□□□□ 0.91
CHRNB1-201ENST00000306071 DDX42Q86XP3 938 aaKnown RBP eCLIP20.76■□□□□ 0.91
CHRNB1-201ENST00000306071 LRRC15Q8TF66 581 aa20.76■□□□□ 0.91
CHRNB1-201ENST00000306071 CUL5Q93034 780 aa20.76■□□□□ 0.91
CHRNB1-201ENST00000306071 HPS3Q969F9 1004 aa20.76■□□□□ 0.91
CHRNB1-201ENST00000306071 INPP4AQ96PE3 977 aaPredicted RBP20.76■□□□□ 0.91
CHRNB1-201ENST00000306071 SLC8A3P57103 927 aa20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 MAGOHP61326 146 aaKnown RBP20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 CUL1Q13616 776 aa20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 PDXDC1Q6P996 788 aa20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 BLIDQ8IZY5 108 aa20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 BAP1Q92560 729 aa20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 TAF4BQ92750 862 aa20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 MAGOHBQ96A72 148 aaKnown RBP20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 TRIM9Q9C026 710 aa20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 TMEM60Q9H2L4 133 aa20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 LUC7LQ9NQ29 371 aaKnown RBP20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 DDAH1O94760 285 aa20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 GHRP10912 638 aa20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 PLCG1P19174 1290 aa20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 IRX1P78414 480 aaPredicted RBP20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 PFKFB3Q16875 520 aaPredicted RBP20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 MEI1Q5TIA1 1274 aa20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 SEMA6BQ9H3T3 888 aa20.75■□□□□ 0.91
CHRNB1-201ENST00000306071 KIF3CO14782 793 aa20.74■□□□□ 0.91
CHRNB1-201ENST00000306071 CALML3P27482 149 aa20.74■□□□□ 0.91
CHRNB1-201ENST00000306071 PPP1R2P41236 205 aa20.74■□□□□ 0.91
CHRNB1-201ENST00000306071 MAN2A1Q16706 1144 aa20.74■□□□□ 0.91
CHRNB1-201ENST00000306071 HOOK2Q96ED9 719 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms