RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 OR8K1Q8NGG5 319 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 COA7Q96BR5 231 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 JPH2Q9BR39 696 aaPredicted RBP18.2■□□□□ 0.5
PDS5A-201ENST00000303538 PUS3Q9BZE2 481 aaKnown RBP18.2■□□□□ 0.5
PDS5A-201ENST00000303538 BCAP29Q9UHQ4 241 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 MAP3K15Q6ZN16 1313 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 ACRBPQ8NEB7 543 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 CHL1O00533 1208 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 INHBAP08476 426 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 BANK1Q8NDB2 785 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 HAUS8Q9BT25 410 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 CALN1Q9BXU9 219 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 PPFIA4O75335 1185 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 NOP14P78316 857 aaKnown RBP18.2■□□□□ 0.5
PDS5A-201ENST00000303538 ASPHQ12797 758 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 THOC5Q13769 683 aaKnown RBP18.2■□□□□ 0.5
PDS5A-201ENST00000303538 HEXIM2Q96MH2 286 aaKnown RBP18.2■□□□□ 0.5
PDS5A-201ENST00000303538 BABAM1Q9NWV8 329 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 SPECC1L-ADORA2AF8WAN1 911 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 NEMP1O14524 444 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 HSPD1P10809 573 aaKnown RBP18.2■□□□□ 0.5
PDS5A-201ENST00000303538 SERPINB6P35237 376 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 CIAPIN1Q6FI81 312 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 SYMPKQ92797 1274 aaKnown RBP18.2■□□□□ 0.5
PDS5A-201ENST00000303538 BAIAP2L1Q9UHR4 511 aa18.2■□□□□ 0.5
PDS5A-201ENST00000303538 DPYSL4O14531 572 aa18.19■□□□□ 0.5
PDS5A-201ENST00000303538 OR6B2Q6IFH4 312 aa18.19■□□□□ 0.5
PDS5A-201ENST00000303538 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.19■□□□□ 0.5
PDS5A-201ENST00000303538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.19■□□□□ 0.56e-6■■■■■ 27.5
PDS5A-201ENST00000303538 HACD3Q9P035 362 aa18.19■□□□□ 0.5
PDS5A-201ENST00000303538 RBM46Q8TBY0 533 aaKnown RBP18.19■□□□□ 0.5
PDS5A-201ENST00000303538 PDCD6IPQ8WUM4 868 aaKnown RBP18.19■□□□□ 0.5
PDS5A-201ENST00000303538 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.19■□□□□ 0.5
PDS5A-201ENST00000303538 ZMYM6O95789 1325 aa18.19■□□□□ 0.5
PDS5A-201ENST00000303538 AFF2P51816 1311 aa18.19■□□□□ 0.5
PDS5A-201ENST00000303538 BMP3P12645 472 aa18.19■□□□□ 0.5
PDS5A-201ENST00000303538 TUBB2AQ13885 445 aa18.19■□□□□ 0.5
PDS5A-201ENST00000303538 TUBB2BQ9BVA1 445 aa18.19■□□□□ 0.5
PDS5A-201ENST00000303538 ATP1A2P50993 1020 aa18.19■□□□□ 0.5
PDS5A-201ENST00000303538 ITSN2Q9NZM3 1697 aa18.19■□□□□ 0.5
PDS5A-201ENST00000303538 EEF1GP26641 437 aaKnown RBP18.19■□□□□ 0.5
PDS5A-201ENST00000303538 EIF2AK2P19525 551 aaKnown RBP18.19■□□□□ 0.5
PDS5A-201ENST00000303538 CDO1Q16878 200 aa18.19■□□□□ 0.5
PDS5A-201ENST00000303538 EXT2Q93063 718 aa18.19■□□□□ 0.5
PDS5A-201ENST00000303538 SEMA3EO15041 775 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 FASTKD5Q7L8L6 764 aaKnown RBP18.18■□□□□ 0.5
PDS5A-201ENST00000303538 ZNF341Q9BYN7 854 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 PTH1RQ03431 593 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 MYO1EQ12965 1108 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 FOSP01100 380 aaPredicted RBP18.18■□□□□ 0.5
PDS5A-201ENST00000303538 HOXA13P31271 388 aaPredicted RBP18.18■□□□□ 0.5
PDS5A-201ENST00000303538 ARL4AP40617 200 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 KCTD6Q8NC69 237 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 LEMD3Q9Y2U8 911 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.18■□□□□ 0.5
PDS5A-201ENST00000303538 OPHN1O60890 802 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 PMLP29590 882 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 MAPK4P31152 587 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 CCDC17Q96LX7 622 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 ZNF335Q9H4Z2 1342 aaPredicted RBP18.18■□□□□ 0.5
PDS5A-201ENST00000303538 EDC4Q6P2E9 1401 aaKnown RBP18.18■□□□□ 0.5
PDS5A-201ENST00000303538 DDIT3P35638 169 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 RASSF7Q02833 373 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 ELMOD1Q8N336 334 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 IMPACTQ9P2X3 320 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 ATP8B3O60423 1300 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 ATP10BO94823 1461 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 RCN2Q14257 317 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 TRIM58Q8NG06 486 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 PIM2Q9P1W9 311 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 ZBTB1Q9Y2K1 713 aa18.18■□□□□ 0.5
PDS5A-201ENST00000303538 PRAG1Q86YV5 1406 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 TRIM68Q6AZZ1 485 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 CCDC38Q502W7 563 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 SCN4BQ8IWT1 228 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 TYW1Q9NV66 732 aaKnown RBP18.17■□□□□ 0.5
PDS5A-201ENST00000303538 NR2F2P24468 414 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 CFAP61Q8NHU2 1237 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 SLC7A5P2Q9GIP4 190 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 CPP00450 1065 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 KLHL14Q9P2G3 628 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 COL17A1Q9UMD9 1497 aaPredicted RBP18.17■□□□□ 0.5
PDS5A-201ENST00000303538 PCCAP05165 728 aaPredicted RBP18.17■□□□□ 0.5
PDS5A-201ENST00000303538 H2AFZP0C0S5 128 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 BRD3Q15059 726 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 USP17L2Q6R6M4 530 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 H2AFVQ71UI9 128 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 LBHD1Q9BQE6 289 aaPredicted RBP18.17■□□□□ 0.5
PDS5A-201ENST00000303538 G3BP2Q9UN86 482 aaKnown RBP18.17■□□□□ 0.5
PDS5A-201ENST00000303538 SUGT1Q9Y2Z0 365 aa18.17■□□□□ 0.5
PDS5A-201ENST00000303538 ZNF233A6NK53 670 aa18.16■□□□□ 0.5
PDS5A-201ENST00000303538 RASSF2P50749 326 aa18.16■□□□□ 0.5
PDS5A-201ENST00000303538 EHHADHQ08426 723 aa18.16■□□□□ 0.5
PDS5A-201ENST00000303538 MUM1Q2TAK8 710 aa18.16■□□□□ 0.5
PDS5A-201ENST00000303538 HABP4Q5JVS0 413 aaKnown RBP18.16■□□□□ 0.5
PDS5A-201ENST00000303538 DARS2Q6PI48 645 aaKnown RBP18.16■□□□□ 0.5
PDS5A-201ENST00000303538 CXorf38Q8TB03 319 aa18.16■□□□□ 0.5
PDS5A-201ENST00000303538 RAET1EQ8TD07 263 aa18.16■□□□□ 0.5
PDS5A-201ENST00000303538 ACCSQ96QU6 501 aa18.16■□□□□ 0.5
PDS5A-201ENST00000303538 CLNS1AP54105 237 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms