RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ZNF333Q96JL9 665 aa27.94■■■□□ 2.06
HOXC9-201ENST00000303450 HMX1Q9NP08 348 aaPredicted RBP27.94■■■□□ 2.06
HOXC9-201ENST00000303450 GNL2Q13823 731 aaKnown RBP27.93■■■□□ 2.06
HOXC9-201ENST00000303450 ZFP91Q96JP5 570 aaPredicted RBP27.93■■■□□ 2.06
HOXC9-201ENST00000303450 KATNBL1Q9H079 304 aa27.93■■■□□ 2.06
HOXC9-201ENST00000303450 LRRC37A2A6NM11 1700 aa27.93■■■□□ 2.06
HOXC9-201ENST00000303450 STAM2O75886 525 aa27.92■■■□□ 2.06
HOXC9-201ENST00000303450 ZNF865P0CJ78 1059 aaPredicted RBP27.92■■■□□ 2.06
HOXC9-201ENST00000303450 CCND3P30281 292 aaPredicted RBP27.92■■■□□ 2.06
HOXC9-201ENST00000303450 ARHGAP4P98171 946 aa27.92■■■□□ 2.06
HOXC9-201ENST00000303450 NONOQ15233 471 aaKnown RBP eCLIP27.92■■■□□ 2.06
HOXC9-201ENST00000303450 MRPS9P82933 396 aaKnown RBP27.92■■■□□ 2.06
HOXC9-201ENST00000303450 MTFR1Q15390 333 aa27.92■■■□□ 2.06
HOXC9-201ENST00000303450 PIK3AP1Q6ZUJ8 805 aa27.92■■■□□ 2.06
HOXC9-201ENST00000303450 TBCKQ8TEA7 893 aa27.92■■■□□ 2.06
HOXC9-201ENST00000303450 UNC93B1Q9H1C4 597 aa27.92■■■□□ 2.06
HOXC9-201ENST00000303450 RTEL1Q9NZ71 1219 aa27.92■■■□□ 2.06
HOXC9-201ENST00000303450 MYH7BA7E2Y1 1941 aa27.91■■■□□ 2.06
HOXC9-201ENST00000303450 ZNF76P36508 570 aa27.91■■■□□ 2.06
HOXC9-201ENST00000303450 MCTP1Q6DN14 999 aa27.91■■■□□ 2.06
HOXC9-201ENST00000303450 SEPT14Q6ZU15 432 aa27.91■■■□□ 2.06
HOXC9-201ENST00000303450 FOXP1Q9H334 677 aaPredicted RBP27.91■■■□□ 2.06
HOXC9-201ENST00000303450 CCL5P13501 91 aa27.9■■■□□ 2.06
HOXC9-201ENST00000303450 CCDC144BQ3MJ40 725 aa27.9■■■□□ 2.06
HOXC9-201ENST00000303450 TAPT1Q6NXT6 567 aa27.9■■■□□ 2.06
HOXC9-201ENST00000303450 TNFRSF25Q93038 417 aa27.9■■■□□ 2.06
HOXC9-201ENST00000303450 RNF208Q9H0X6 261 aa27.9■■■□□ 2.06
HOXC9-201ENST00000303450 PDGFCQ9NRA1 345 aa27.9■■■□□ 2.06
HOXC9-201ENST00000303450 FAM184BQ9ULE4 1060 aa27.9■■■□□ 2.06
HOXC9-201ENST00000303450 KIAA1217Q5T5P2 1943 aa27.89■■■□□ 2.06
HOXC9-201ENST00000303450 SEPT4O43236 478 aa27.89■■■□□ 2.06
HOXC9-201ENST00000303450 CYP3A4P08684 503 aa27.89■■■□□ 2.06
HOXC9-201ENST00000303450 AKR1A1P14550 325 aa27.89■■■□□ 2.06
HOXC9-201ENST00000303450 SYT1P21579 422 aa27.89■■■□□ 2.06
HOXC9-201ENST00000303450 INF2Q27J81 1249 aa27.89■■■□□ 2.06
HOXC9-201ENST00000303450 GNPTABQ3T906 1256 aa27.89■■■□□ 2.06
HOXC9-201ENST00000303450 CRYGNQ8WXF5 182 aa27.89■■■□□ 2.06
HOXC9-201ENST00000303450 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.89■■■□□ 2.06
HOXC9-201ENST00000303450 TSHZ2Q9NRE2 1034 aa27.89■■■□□ 2.06
HOXC9-201ENST00000303450 VPS37CA5D8V6 355 aaPredicted RBP27.88■■■□□ 2.05
HOXC9-201ENST00000303450 NLRX1Q86UT6 975 aa27.88■■■□□ 2.05
HOXC9-201ENST00000303450 SCFD2Q8WU76 684 aa27.88■■■□□ 2.05
HOXC9-201ENST00000303450 RGS20O76081 388 aa27.87■■■□□ 2.05
HOXC9-201ENST00000303450 ADCYAP1R1P41586 468 aa27.87■■■□□ 2.05
HOXC9-201ENST00000303450 USP11P51784 963 aa27.87■■■□□ 2.05
HOXC9-201ENST00000303450 EARS2Q5JPH6 523 aaKnown RBP27.87■■■□□ 2.05
HOXC9-201ENST00000303450 IQSEC1Q6DN90 963 aa27.87■■■□□ 2.05
HOXC9-201ENST00000303450 INPP4AQ96PE3 977 aaPredicted RBP27.87■■■□□ 2.05
HOXC9-201ENST00000303450 WDR11Q9BZH6 1224 aa27.87■■■□□ 2.05
HOXC9-201ENST00000303450 RBM47A0AV96 593 aaKnown RBP27.87■■■□□ 2.05
HOXC9-201ENST00000303450 TNFAIP2Q03169 654 aa27.87■■■□□ 2.05
HOXC9-201ENST00000303450 TTLL4Q14679 1199 aa27.87■■■□□ 2.05
HOXC9-201ENST00000303450 CEP55Q53EZ4 464 aa27.87■■■□□ 2.05
HOXC9-201ENST00000303450 NOSTRINQ8IVI9 506 aa27.87■■■□□ 2.05
HOXC9-201ENST00000303450 TNS4Q8IZW8 715 aa27.87■■■□□ 2.05
HOXC9-201ENST00000303450 MXRA8Q9BRK3 442 aa27.87■■■□□ 2.05
HOXC9-201ENST00000303450 UBIAD1Q9Y5Z9 338 aa27.87■■■□□ 2.05
HOXC9-201ENST00000303450 MRVI1Q9Y6F6 885 aa27.87■■■□□ 2.05
HOXC9-201ENST00000303450 FAM205CA6NFA0 338 aa27.86■■■□□ 2.05
HOXC9-201ENST00000303450 KIF28PB7ZC32 967 aa27.86■■■□□ 2.05
HOXC9-201ENST00000303450 MSCO60682 206 aa27.86■■■□□ 2.05
HOXC9-201ENST00000303450 ITGB5P18084 799 aa27.86■■■□□ 2.05
HOXC9-201ENST00000303450 U2AF2P26368 475 aaKnown RBP eCLIP27.86■■■□□ 2.05
HOXC9-201ENST00000303450 NEK8Q86SG6 692 aa27.86■■■□□ 2.05
HOXC9-201ENST00000303450 PAK6Q9NQU5 681 aaPredicted RBP27.86■■■□□ 2.05
HOXC9-201ENST00000303450 DAXXQ9UER7 740 aaPredicted RBP27.86■■■□□ 2.05
HOXC9-201ENST00000303450 DDX20Q9UHI6 824 aaKnown RBP27.86■■■□□ 2.05
HOXC9-201ENST00000303450 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.85■■■□□ 2.05
HOXC9-201ENST00000303450 KCNV1Q6PIU1 500 aa27.85■■■□□ 2.05
HOXC9-201ENST00000303450 GPRASP2Q96D09 838 aa27.85■■■□□ 2.05
HOXC9-201ENST00000303450 JADE2Q9NQC1 790 aa27.85■■■□□ 2.05
HOXC9-201ENST00000303450 RBM19Q9Y4C8 960 aaKnown RBP27.85■■■□□ 2.05
HOXC9-201ENST00000303450 FIBPO43427 364 aa27.84■■■□□ 2.05
HOXC9-201ENST00000303450 STX6O43752 255 aa27.84■■■□□ 2.05
HOXC9-201ENST00000303450 TXNP10599 105 aaKnown RBP27.84■■■□□ 2.05
HOXC9-201ENST00000303450 RARBP10826 455 aa27.84■■■□□ 2.05
HOXC9-201ENST00000303450 MTMR1Q13613 665 aa27.84■■■□□ 2.05
HOXC9-201ENST00000303450 LETM2Q2VYF4 491 aa27.84■■■□□ 2.05
HOXC9-201ENST00000303450 ANO1Q5XXA6 986 aa27.84■■■□□ 2.05
HOXC9-201ENST00000303450 CYP2W1Q8TAV3 490 aa27.84■■■□□ 2.05
HOXC9-201ENST00000303450 CDHR1Q96JP9 859 aa27.84■■■□□ 2.05
HOXC9-201ENST00000303450 TMEM106CQ9BVX2 250 aa27.84■■■□□ 2.05
HOXC9-201ENST00000303450 FAM86B1E9PN63 330 aa27.83■■■□□ 2.05
HOXC9-201ENST00000303450 FAM86B2P0C5J1 330 aa27.83■■■□□ 2.05
HOXC9-201ENST00000303450 TGFB3P10600 412 aa27.83■■■□□ 2.05
HOXC9-201ENST00000303450 SMPD1P17405 629 aa27.83■■■□□ 2.05
HOXC9-201ENST00000303450 ICAM3P32942 547 aa27.83■■■□□ 2.05
HOXC9-201ENST00000303450 CIITAP33076 1130 aa27.83■■■□□ 2.05
HOXC9-201ENST00000303450 ABHD8Q96I13 439 aa27.83■■■□□ 2.05
HOXC9-201ENST00000303450 DEFB118Q96PH6 123 aa27.83■■■□□ 2.05
HOXC9-201ENST00000303450 SPATA31C2B4DYI2 1134 aa27.82■■■□□ 2.04
HOXC9-201ENST00000303450 MEIS1O00470 390 aa27.82■■■□□ 2.04
HOXC9-201ENST00000303450 MAFGO15525 162 aa27.82■■■□□ 2.04
HOXC9-201ENST00000303450 EDIL3O43854 480 aa27.82■■■□□ 2.04
HOXC9-201ENST00000303450 PDIA4P13667 645 aaKnown RBP27.82■■■□□ 2.04
HOXC9-201ENST00000303450 DUSP28Q4G0W2 176 aa27.82■■■□□ 2.04
HOXC9-201ENST00000303450 CCDC62Q6P9F0 684 aa27.82■■■□□ 2.04
HOXC9-201ENST00000303450 ADCY6O43306 1168 aa27.82■■■□□ 2.04
HOXC9-201ENST00000303450 ARIH2O95376 493 aa27.82■■■□□ 2.04
HOXC9-201ENST00000303450 LY6KQ17RY6 165 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms