RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 SPIRE1Q08AE8 756 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 MTMR2Q13614 643 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 PRR16Q569H4 304 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 KLHL10Q6JEL2 608 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 UNC13DQ70J99 1090 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 LRRC8AQ8IWT6 810 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 TRMT44Q8IYL2 757 aaKnown RBP11.88□□□□□ -0.51
CLP1-201ENST00000302731 CCDC150Q8NCX0 1101 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 ERMNQ8TAM6 284 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 DHTKD1Q96HY7 919 aaPredicted RBP11.88□□□□□ -0.51
CLP1-201ENST00000302731 PLIN2Q99541 437 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 SYT17Q9BSW7 474 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 MAF1Q9H063 256 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
CLP1-201ENST00000302731 EXOC1Q9NV70 894 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 CCPG1Q9ULG6 757 aa11.88□□□□□ -0.51
CLP1-201ENST00000302731 IGLV3-22A0A075B6J6 115 aa11.87□□□□□ -0.51
CLP1-201ENST00000302731 ZNF76P36508 570 aa11.87□□□□□ -0.51
CLP1-201ENST00000302731 CCT6AP40227 531 aaKnown RBP11.87□□□□□ -0.51
CLP1-201ENST00000302731 PRCPP42785 496 aa11.87□□□□□ -0.51
CLP1-201ENST00000302731 ASIC1P78348 528 aa11.87□□□□□ -0.51
CLP1-201ENST00000302731 SPP2Q13103 211 aa11.87□□□□□ -0.51
CLP1-201ENST00000302731 VSTM4Q8IW00 320 aa11.87□□□□□ -0.51
CLP1-201ENST00000302731 SMYD4Q8IYR2 804 aaPredicted RBP11.87□□□□□ -0.51
CLP1-201ENST00000302731 CACTINQ8WUQ7 758 aaKnown RBP11.87□□□□□ -0.51
CLP1-201ENST00000302731 NELFBQ8WX92 580 aa11.87□□□□□ -0.51
CLP1-201ENST00000302731 NUDT12Q9BQG2 462 aa11.87□□□□□ -0.51
CLP1-201ENST00000302731 SAMSN1Q9NSI8 373 aaKnown RBP11.87□□□□□ -0.51
CLP1-201ENST00000302731 SPTLC3Q9NUV7 552 aa11.87□□□□□ -0.51
CLP1-201ENST00000302731 GDAQ9Y2T3 454 aa11.87□□□□□ -0.51
CLP1-201ENST00000302731 SSC5DA1L4H1 1573 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 A0A1B0GTH6 734 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 LRRC10BA6NIK2 292 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 PSMA7O14818 248 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 MSH4O15457 936 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 ZBED4O75132 1171 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 FLOT1O75955 427 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 OAZ1P54368 228 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 SETQ01105 290 aaPredicted RBP11.86□□□□□ -0.51
CLP1-201ENST00000302731 PDE4DQ08499 809 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 PSMD2Q13200 908 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 NR1I3Q14994 352 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 FOXR2Q6PJQ5 311 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 TMC6Q7Z403 805 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 FILIP1Q7Z7B0 1213 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 FCHSD1Q86WN1 690 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 NOC3LQ8WTT2 800 aaKnown RBP11.86□□□□□ -0.51
CLP1-201ENST00000302731 NAP1L5Q96NT1 182 aaPredicted RBP11.86□□□□□ -0.51
CLP1-201ENST00000302731 TANGO6Q9C0B7 1094 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 RPAP3Q9H6T3 665 aaPredicted RBP11.86□□□□□ -0.51
CLP1-201ENST00000302731 RNF181Q9P0P0 153 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 CTNND2Q9UQB3 1225 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 RPTORQ8N122 1335 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 SMCHD1A6NHR9 2005 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 BICDL2A1A5D9 508 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 MYMKA6NI61 221 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 DDNO94850 711 aaPredicted RBP11.86□□□□□ -0.51
CLP1-201ENST00000302731 TAL1P17542 331 aaPredicted RBP11.86□□□□□ -0.51
CLP1-201ENST00000302731 MUTP22033 750 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 RPA1P27694 616 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 MCM6Q14566 821 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 NOLC1Q14978 699 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLP1-201ENST00000302731 ECM1Q16610 540 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 TPD52L1Q16890 204 aaPredicted RBP11.86□□□□□ -0.51
CLP1-201ENST00000302731 CEP55Q53EZ4 464 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 NIPA1Q7RTP0 329 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 KRT26Q7Z3Y9 468 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLP1-201ENST00000302731 CLEC4DQ8WXI8 215 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 TBC1D5Q92609 795 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 ZKSCAN4Q969J2 545 aaPredicted RBP11.86□□□□□ -0.51
CLP1-201ENST00000302731 AGBL1Q96MI9 1066 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 POLR3CQ9BUI4 534 aaPredicted RBP11.86□□□□□ -0.51
CLP1-201ENST00000302731 BMP2KQ9NSY1 1161 aaPredicted RBP11.86□□□□□ -0.51
CLP1-201ENST00000302731 VAV3Q9UKW4 847 aa11.86□□□□□ -0.51
CLP1-201ENST00000302731 PARP14Q460N5 1801 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 PHIPQ8WWQ0 1821 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 MEIS1O00470 390 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 NRDCO43847 1150 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 OFD1O75665 1012 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 BCRP11274 1271 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 KCNJ6P48051 423 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 STX17P56962 302 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 EHHADHQ08426 723 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 PPP2R5CQ13362 524 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 FILIP1LQ4L180 1135 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 SH3D19Q5HYK7 790 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.85□□□□□ -0.51
CLP1-201ENST00000302731 APTXQ7Z2E3 356 aaKnown RBP11.85□□□□□ -0.51
CLP1-201ENST00000302731 ANKRD20A12PQ8NF67 263 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 RBM46Q8TBY0 533 aaKnown RBP11.85□□□□□ -0.51
CLP1-201ENST00000302731 SLC5A5Q92911 643 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 INTS13Q9NVM9 706 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 ADD3Q9UEY8 706 aaKnown RBP11.85□□□□□ -0.51
CLP1-201ENST00000302731 LIMA1Q9UHB6 759 aaKnown RBP11.85□□□□□ -0.51
CLP1-201ENST00000302731 PYCARDQ9ULZ3 195 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 ADAMTS5Q9UNA0 930 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 ZHX2Q9Y6X8 837 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 FRMPD4Q14CM0 1322 aa11.85□□□□□ -0.51
CLP1-201ENST00000302731 MYPNQ86TC9 1320 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms