RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 SPATA31A5Q5VU36 1347 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 SPATA31A7Q8IWB4 1347 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 FAM196BA6NMK8 535 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 ELMOD1Q8N336 334 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 ELP3Q9H9T3 547 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 MEIS1O00470 390 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 DPYSL4O14531 572 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 NSFP46459 744 aaKnown RBP14.28□□□□□ -0.12
ABR-202ENST00000302538 PTK2Q05397 1052 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 NKX1-1Q15270 411 aaPredicted RBP14.28□□□□□ -0.12
ABR-202ENST00000302538 GIMAP7Q8NHV1 300 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 PFKFB1P16118 471 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 GAP43P17677 238 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 GTF2F1P35269 517 aaKnown RBP eCLIP14.28□□□□□ -0.123e-6■■■■□ 22.6
ABR-202ENST00000302538 TMTC1Q8IUR5 882 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 ZBTB9Q96C00 473 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 NT5C1BQ96P26 610 aa14.28□□□□□ -0.12
ABR-202ENST00000302538 NAPGQ99747 312 aaPredicted RBP14.28□□□□□ -0.12
ABR-202ENST00000302538 PIH1D3Q9NQM4 214 aaKnown RBP14.28□□□□□ -0.12
ABR-202ENST00000302538 NXF1Q9UBU9 619 aaKnown RBP14.28□□□□□ -0.12
ABR-202ENST00000302538 CPS1P31327 1500 aa14.27□□□□□ -0.12
ABR-202ENST00000302538 FCER1AP12319 257 aa14.27□□□□□ -0.12
ABR-202ENST00000302538 TUBB4BP68371 445 aa14.27□□□□□ -0.12
ABR-202ENST00000302538 GPSM2P81274 684 aa14.27□□□□□ -0.12
ABR-202ENST00000302538 PTPN12Q05209 780 aaKnown RBP14.27□□□□□ -0.12
ABR-202ENST00000302538 RNF26Q9BY78 433 aaPredicted RBP14.27□□□□□ -0.12
ABR-202ENST00000302538 PDIA3P30101 505 aaKnown RBP14.27□□□□□ -0.13
ABR-202ENST00000302538 KLHL7Q8IXQ5 586 aa14.27□□□□□ -0.13
ABR-202ENST00000302538 MARCH10Q8NA82 808 aaPredicted RBP14.27□□□□□ -0.13
ABR-202ENST00000302538 PUS7LQ9H0K6 701 aaKnown RBP14.27□□□□□ -0.13
ABR-202ENST00000302538 PIDD1Q9HB75 910 aa14.27□□□□□ -0.13
ABR-202ENST00000302538 LRRC4Q9HBW1 653 aa14.27□□□□□ -0.13
ABR-202ENST00000302538 ZNRF3Q9ULT6 936 aa14.27□□□□□ -0.13
ABR-202ENST00000302538 MYL7Q01449 175 aa14.27□□□□□ -0.13
ABR-202ENST00000302538 DNAJC21Q5F1R6 531 aaKnown RBP14.27□□□□□ -0.13
ABR-202ENST00000302538 SP8Q8IXZ3 490 aa14.27□□□□□ -0.13
ABR-202ENST00000302538 PSMB7Q99436 277 aa14.27□□□□□ -0.13
ABR-202ENST00000302538 MTIF3Q9H2K0 278 aaKnown RBP14.27□□□□□ -0.13
ABR-202ENST00000302538 FEM1BQ9UK73 627 aa14.27□□□□□ -0.13
ABR-202ENST00000302538 PNMA6FA0A0J9YX94 578 aa14.27□□□□□ -0.13
ABR-202ENST00000302538 KRT10P13645 584 aa14.27□□□□□ -0.13
ABR-202ENST00000302538 ZNF449Q6P9G9 518 aa14.27□□□□□ -0.13
ABR-202ENST00000302538 LARP4BQ92615 738 aaKnown RBP14.27□□□□□ -0.13
ABR-202ENST00000302538 SYMPKQ92797 1274 aaKnown RBP14.27□□□□□ -0.13
ABR-202ENST00000302538 TRERF1Q96PN7 1200 aa14.27□□□□□ -0.13
ABR-202ENST00000302538 RMDN3Q96TC7 470 aa14.27□□□□□ -0.13
ABR-202ENST00000302538 CNOT7Q9UIV1 285 aaKnown RBP14.27□□□□□ -0.13
ABR-202ENST00000302538 KCNJ18B7U540 433 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 LAD1O00515 517 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 GTPBP6O43824 516 aaPredicted RBP14.26□□□□□ -0.13
ABR-202ENST00000302538 ZWINTO95229 277 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 KCNJ12Q14500 433 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 CPLX4Q7Z7G2 160 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.26□□□□□ -0.13
ABR-202ENST00000302538 V9GYY5 206 aaPredicted RBP14.26□□□□□ -0.13
ABR-202ENST00000302538 TMEM131LA2VDJ0 1609 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 BNIP3LO60238 219 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 MFAP3P55082 362 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
ABR-202ENST00000302538 TTLL4Q14679 1199 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 SPATA24Q86W54 205 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 DCAF4Q8WV16 495 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 IQCDQ96DY2 449 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 IRAK4Q9NWZ3 460 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 MKRN1Q9UHC7 482 aaKnown RBP14.26□□□□□ -0.13
ABR-202ENST00000302538 IGKV5-2P06315 115 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 PRDX5P30044 214 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 BPIFB4P59827 614 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 MORC3Q14149 939 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 SETDB1Q15047 1291 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 APOA5Q6Q788 366 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 CTAGE3PQ8IX95 158 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 ARFGAP2Q8N6H7 521 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 RNF139Q8WU17 664 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 RPF1Q9H9Y2 349 aaKnown RBP14.26□□□□□ -0.13
ABR-202ENST00000302538 AMFRQ9UKV5 643 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 ZNF233A6NK53 670 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 ABCD1P33897 745 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 TWF2Q6IBS0 349 aaKnown RBP14.26□□□□□ -0.13
ABR-202ENST00000302538 PCIF1Q9H4Z3 704 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 VPS37BQ9H9H4 285 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 STAP2Q9UGK3 403 aa14.26□□□□□ -0.13
ABR-202ENST00000302538 MYO3AQ8NEV4 1616 aa14.25□□□□□ -0.13
ABR-202ENST00000302538 RPN1P04843 607 aaKnown RBP14.25□□□□□ -0.13
ABR-202ENST00000302538 SEPT2Q15019 361 aa14.25□□□□□ -0.13
ABR-202ENST00000302538 GIMAP8Q8ND71 665 aaPredicted RBP14.25□□□□□ -0.13
ABR-202ENST00000302538 RNF146Q9NTX7 359 aa14.25□□□□□ -0.13
ABR-202ENST00000302538 TPCN1Q9ULQ1 816 aa14.25□□□□□ -0.13
ABR-202ENST00000302538 DEPDC5O75140 1603 aa14.25□□□□□ -0.13
ABR-202ENST00000302538 GOLGA8CPA6NN73 597 aa14.25□□□□□ -0.13
ABR-202ENST00000302538 THAP12O43422 761 aa14.25□□□□□ -0.13
ABR-202ENST00000302538 KCNA4P22459 653 aa14.25□□□□□ -0.13
ABR-202ENST00000302538 TICAM2Q86XR7 235 aa14.25□□□□□ -0.13
ABR-202ENST00000302538 SIX6OS1Q8N1H7 587 aa14.25□□□□□ -0.13
ABR-202ENST00000302538 IFIH1Q9BYX4 1025 aaKnown RBP14.25□□□□□ -0.13
ABR-202ENST00000302538 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.25□□□□□ -0.13
ABR-202ENST00000302538 TCP11Q8WWU5 503 aa14.25□□□□□ -0.13
ABR-202ENST00000302538 ERCC6LQ2NKX8 1250 aa14.25□□□□□ -0.13
ABR-202ENST00000302538 MAP7D3Q8IWC1 876 aa14.25□□□□□ -0.13
ABR-202ENST00000302538 ADGRB1O14514 1584 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms