RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 TET1Q8NFU7 2136 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 VCANP13611 3396 aa13.04□□□□□ -0.32
CLCC1-201ENST00000302500 REV3LO60673 3130 aa13.03□□□□□ -0.32
CLCC1-201ENST00000302500 PTPRSQ13332 1948 aa13.03□□□□□ -0.32
CLCC1-201ENST00000302500 A0A0U1RQG5 324 aaPredicted RBP13.03□□□□□ -0.32
CLCC1-201ENST00000302500 hCG_1642624A0A1W2PR95 340 aa13.03□□□□□ -0.32
CLCC1-201ENST00000302500 CCDC69A6NI79 296 aa13.03□□□□□ -0.32
CLCC1-201ENST00000302500 EIF3JO75822 258 aaKnown RBP13.03□□□□□ -0.32
CLCC1-201ENST00000302500 CLTBP09497 229 aa13.03□□□□□ -0.32
CLCC1-201ENST00000302500 EIF2AK2P19525 551 aaKnown RBP13.03□□□□□ -0.32
CLCC1-201ENST00000302500 ICAM3P32942 547 aa13.03□□□□□ -0.32
CLCC1-201ENST00000302500 PDE4DQ08499 809 aa13.03□□□□□ -0.32
CLCC1-201ENST00000302500 USP17L6PQ6QN14 398 aa13.03□□□□□ -0.32
CLCC1-201ENST00000302500 C16orf59Q7L2K0 433 aa13.03□□□□□ -0.32
CLCC1-201ENST00000302500 MICU3Q86XE3 530 aa13.03□□□□□ -0.32
CLCC1-201ENST00000302500 CRYGNQ8WXF5 182 aa13.03□□□□□ -0.32
CLCC1-201ENST00000302500 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
CLCC1-201ENST00000302500 DHX16O60231 1041 aaKnown RBP13.02□□□□□ -0.33
CLCC1-201ENST00000302500 CABYRO75952 493 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 HMGB1P09429 215 aaKnown RBP13.02□□□□□ -0.33
CLCC1-201ENST00000302500 CLK2P49760 499 aaKnown RBP13.02□□□□□ -0.33
CLCC1-201ENST00000302500 GNAQP50148 359 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 PSMC6P62333 389 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 MDM2Q00987 491 aaPredicted RBP13.02□□□□□ -0.33
CLCC1-201ENST00000302500 PPP2R5BQ15173 497 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 STXBP2Q15833 593 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 PKN1Q16512 942 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 LY6KQ17RY6 165 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 RASIP1Q5U651 963 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 WWC2Q6AWC2 1192 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 TDHQ8IZJ6 230 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 GLT1D1Q96MS3 346 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 TM6SF1Q9BZW5 370 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 TELO2Q9Y4R8 837 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 TRANK1O15050 2925 aa13.02□□□□□ -0.33
CLCC1-201ENST00000302500 GBF1Q92538 1859 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 WDR81Q562E7 1941 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 GCOM1H8Y6P7 765 aaPredicted RBP13.01□□□□□ -0.33
CLCC1-201ENST00000302500 HAS3O00219 553 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 EDIL3O43854 480 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 B4GALT4O60513 344 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 PQBP1O60828 265 aaKnown RBP13.01□□□□□ -0.33
CLCC1-201ENST00000302500 REC8O95072 547 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 NEFLP07196 543 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 MMP3P08254 477 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 POLR2MP0CAP2 368 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 TXNP10599 105 aaKnown RBP13.01□□□□□ -0.33
CLCC1-201ENST00000302500 HOXC8P31273 242 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 ADD1P35611 737 aaKnown RBP13.01□□□□□ -0.33
CLCC1-201ENST00000302500 APOBRQ0VD83 1088 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 ITGA7Q13683 1181 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 TTLL4Q14679 1199 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 C9orf50Q5SZB4 431 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 MYSM1Q5VVJ2 828 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 Q6ZUG5 572 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 BADQ92934 168 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 RRP36Q96EU6 259 aaKnown RBP13.01□□□□□ -0.33
CLCC1-201ENST00000302500 LRCH3Q96II8 777 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 JAKMIP1Q96N16 626 aaKnown RBP13.01□□□□□ -0.33
CLCC1-201ENST00000302500 UMODL1Q5DID0 1318 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 SIP14410 1827 aa13.01□□□□□ -0.33
CLCC1-201ENST00000302500 MROH7Q68CQ1 1323 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 KLF18A0A0U1RQI7 1052 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 SPATA31C2B4DYI2 1134 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 STXBP3O00186 592 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 ZBTB43O43298 467 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 UBA1P22314 1058 aaKnown RBP13□□□□□ -0.33
CLCC1-201ENST00000302500 TRAF1Q13077 416 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 HIC1Q14526 733 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 HSDL1Q3SXM5 330 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 ARHGEF16Q5VV41 709 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 PCNX4Q63HM2 1172 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 RUFY3Q7L099 469 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 SESTD1Q86VW0 696 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 OR6J1Q8NGC5 347 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 AFG1LQ8WV93 481 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 PIBF1Q8WXW3 757 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 BRF1Q92994 677 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 ZFP91Q96JP5 570 aaPredicted RBP13□□□□□ -0.33
CLCC1-201ENST00000302500 WNT8AQ9H1J5 351 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 ALDH8A1Q9H2A2 487 aaPredicted RBP13□□□□□ -0.33
CLCC1-201ENST00000302500 SPC25Q9HBM1 224 aa13□□□□□ -0.33
CLCC1-201ENST00000302500 RBM28Q9NW13 759 aaKnown RBP13□□□□□ -0.33
CLCC1-201ENST00000302500 SEC24BO95487 1268 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 F2P00734 622 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 TIMP1P01033 207 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 TGFB3P10600 412 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 PDIA3P30101 505 aaKnown RBP12.99□□□□□ -0.33
CLCC1-201ENST00000302500 CPT1AP50416 773 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 RTN1Q16799 776 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 SEPT14Q6ZU15 432 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 TEX2Q8IWB9 1127 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 PPTC7Q8NI37 304 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 C16orf70Q9BSU1 422 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 NOC4LQ9BVI4 516 aaKnown RBP12.99□□□□□ -0.33
CLCC1-201ENST00000302500 SEZ6LQ9BYH1 1024 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 AP5M1Q9H0R1 490 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 BARHL2Q9NY43 387 aa12.99□□□□□ -0.33
CLCC1-201ENST00000302500 A0A0C4DFX4 3053 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms